Scaffold KiloMoana_10007962

Overview

Basic Information

• Taxon OID: 3300001680
• Scaffold ID: KiloMoana_10007962
• Source Dataset Name: Black smokers hydrothermal plume microbial communities from Kilo Moana, Pacific Ocean
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 5896
• Total Scaffold Genes: 25
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 23 (92.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume → Black Smokers Hydrothermal Plume Microbial Communities From Kilo Moana, Pacific Ocean

Source Dataset Sampling Location

• Location Name: Kilo Moana, Lau Basin, Pacific Ocean
• Coordinates
  • Lat. (^o): -20.054108
  • Long. (^o): -176.133522
  • Depth (m): 2600

Associated Families

Family	Category	Number of Sequences	3D Structure?
F004771	Metagenome	424	Y
F044592	Metagenome	154	Y

Sequences

Protein ID	Family	RBS	Sequence
KiloMoana_100079625	F044592	GAGG	VKVGDLVKYKGTLGIVTALCTKRWAKPADVWVLWSNKRKPMVESGDFMELINESR*
KiloMoana_100079627	F004771	GGAG	MRVKVGDLVRMKLGMYDSDLVGIVLEVYQAMTNKPAGGVQIGIKWFGGSGKMDWEPEPWLEVVSESR*