Scaffold TahiMoana_1034613

Overview

Basic Information

• Taxon OID: 3300001679
• Scaffold ID: TahiMoana_1034613
• Source Dataset Name: Black smokers hydrothermal plume microbial communities from Tahi Moana, Lau Basin, Pacific Ocean
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1640
• Total Scaffold Genes: 5
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 3 (60.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume → Black Smokers Hydrothermal Plume Microbial Communities From Tahi Moana, Lau Basin, Pacific Ocean

Source Dataset Sampling Location

• Location Name: Tahi Moana, Lau Basin, Pacific Ocean
• Coordinates
  • Lat. (^o): -20.682131
  • Long. (^o): -176.183363
  • Depth (m): 2230

Associated Families

Family	Category	Number of Sequences	3D Structure?
F005148	Metagenome / Metatranscriptome	410	Y
F008755	Metagenome / Metatranscriptome	328	Y

Sequences

Protein ID	Family	RBS	Sequence
TahiMoana_10346132	F005148	GGAG	MKQKKYEEFLKRNLPVSEEVECKNCERKYYDEWNLLSLQSLDLCLLCANRNLDKQTIKEKYYHE*
TahiMoana_10346134	F008755	N/A	MNKSRLARDLWRKVFNDNLINLSDGDARKGVVRDFLNDPINKKAGWKSKDARFFRLGFQKVARENNFNVMQIGVTPTPTRSKTQKGSLNMNVKTKQKNPMPLGESIKPPTEQEKKAGRPIPTTPQLEGQQAQATYYTSQSIGQIFETIVNIISARTGCSPLSQNERIALGEAWLPIFAEYFSGENSKWVMVALITIPIILRIFAEIQANKKKKELKETYGIDDVPKKNVPRKKSAWENMSHGKNETNKK*