Scaffold TahiMoana_1008620

Overview

Basic Information

• Taxon OID: 3300001679
• Scaffold ID: TahiMoana_1008620
• Source Dataset Name: Black smokers hydrothermal plume microbial communities from Tahi Moana, Lau Basin, Pacific Ocean
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 4505
• Total Scaffold Genes: 11
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 8 (72.73%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 3 (100.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume → Black Smokers Hydrothermal Plume Microbial Communities From Tahi Moana, Lau Basin, Pacific Ocean

Source Dataset Sampling Location

• Location Name: Tahi Moana, Lau Basin, Pacific Ocean
• Coordinates
  • Lat. (^o): -20.682131
  • Long. (^o): -176.183363
  • Depth (m): 2230

Associated Families

Family	Category	Number of Sequences	3D Structure?
F043695	Metagenome	156	N
F100047	Metagenome	103	Y

Sequences

Protein ID	Family	RBS	Sequence
TahiMoana_10086201	F043695	AGG	MTLSAGTGFNAIGREIFGFANQVNFADGSTGDDRVVFDFTSPSQLYLVEMMPAINTSGMSANDILSFSLTGNNLPLFQTKFALSVANEPIQAQLPSIKFILPKLTILKALFNMQ
TahiMoana_10086203	F100047	GAG	MALTIARTESQLSATTAFQAMDNLMASTVSSSFVVPSGVSRLVSVDCGVTNDTAEESAILLRFAGNGMSDGEQYVVGAAIVPIGSSTGATSNYVSKDTDFNVISGNSIECSIAVTDAATISATVVMTFA*
TahiMoana_10086209	F043695	AGG	MTLSAGTGFNAVGREIFGFAPQINFADEASNTDRTAFDFTSPLQLYMVELQPAINTAGMAADDILSFSLQGNGLAIFQSKFALTAASEPVQAQLPTIKFIMPSRTILKAIFNMQSGTGMIGSATCMFRGVSFA*