Scaffold TahiMoana_1000036

Overview

Basic Information

• Taxon OID: 3300001679
• Scaffold ID: TahiMoana_1000036
• Source Dataset Name: Black smokers hydrothermal plume microbial communities from Tahi Moana, Lau Basin, Pacific Ocean
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 102518
• Total Scaffold Genes: 162
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 139 (85.80%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 3 (100.00%)
• Associated Families: 3

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales (Source: IMG-VR)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume → Black Smokers Hydrothermal Plume Microbial Communities From Tahi Moana, Lau Basin, Pacific Ocean

Source Dataset Sampling Location

• Location Name: Tahi Moana, Lau Basin, Pacific Ocean
• Coordinates
  • Lat. (^o): -20.682131
  • Long. (^o): -176.183363
  • Depth (m): 2230

Associated Families

Family	Category	Number of Sequences	3D Structure?
F018267	Metagenome	236	Y
F053548	Metagenome	141	Y
F083258	Metagenome	113	Y

Sequences

Protein ID	Family	RBS	Sequence
TahiMoana_10000361	F083258	GAG	METIHTIETDDLTAKLNKPEIDILQYIDSWLPTLTDWSVEEISHKCKLFRSDADDAVDMLILHGLLDNAGTCPTMGRRVCVPELAALWMRENTETINSLCIMNDCELFTLKETATA*
TahiMoana_100003643	F018267	GGAGG	VKVGDLISFKPKSFGDDDWSNPGIVLDSYEHDDRQTGGWKDLIWIVWIDGYKCMVNQRNDDVVYLTGS*
TahiMoana_100003652	F053548	GGA	MKASGAPSIGDLVVALYDVERDISCVGLVMETKGIECNVRWLSASYPIGWWQRSALKVISPSGKTKKV*