Scaffold Draft_10011789

Overview

Basic Information

• Taxon OID: 3300001605
• Scaffold ID: Draft_10011789
• Source Dataset Name: Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: McGill University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 9035
• Total Scaffold Genes: 29
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 22 (75.86%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Associated Families: 3

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location

• Location Name: Fort McMurray in northeastern Alberta, Canada
• Coordinates
  • Lat. (^o): 57.01116
  • Long. (^o): -111.6
  • Depth (m): 0 to .1

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001507	Metagenome / Metatranscriptome	681	Y
F012770	Metagenome / Metatranscriptome	277	Y
F020863	Metagenome	221	Y

Sequences

Protein ID	Family	RBS	Sequence
Draft_1001178924	F012770	N/A	MNIEEEPPHNHCHDCNITFPDSFALIDHYLEEDETFDPYYLLPSGFKLMLGSMLRFLFDNAHDPDQVKLITQSTYVTLFASENGYDLVDELVEDMIVKSALQDFDRDLQNLLAEEPDDNESGA*
Draft_100117894	F020863	AGGAG	MQTKMEDLHRLVGVLEELVKPLLEGEEVPDVYESMKRPHLVLQAGSKTYGRAFRIHFTGGSHYGSGHWEPRGFSDYLGGTKAEAERTLRSXXMRGFVQA*
Draft_100117895	F001507	GAGG	MNATENKPYTVEQLINEIYEDNYSHLEFEWNMGGEPCECKICLTMQTIVKYWGE*