Scaffold Draft_10013708

Overview

Basic Information

• Taxon OID: 3300001580
• Scaffold ID: Draft_10013708
• Source Dataset Name: Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Suncor taillings pond 6 2012TP6_6
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: McGill University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 6637
• Total Scaffold Genes: 10
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 9 (90.00%)
• Novel Protein Genes: 5
• Novel Protein Genes with Ribosome Binding Sites (RBS): 4 (80.00%)
• Associated Families: 5

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location

• Location Name: Suncor Tailings Pond 6, Northern Alberta, Canada
• Coordinates
  • Lat. (^o): 57.05
  • Long. (^o): -111.55
  • Depth (m): 6

Associated Families

Family	Category	Number of Sequences	3D Structure?
F002260	Metagenome / Metatranscriptome	577	Y
F011761	Metagenome / Metatranscriptome	287	Y
F040626	Metagenome	161	Y
F058142	Metagenome / Metatranscriptome	135	Y
F058146	Metagenome	135	Y

Sequences

Protein ID	Family	RBS	Sequence
Draft_1001370810	F011761	N/A	MAYVLGGANNEADGFTTAISNFALRAMHESQGLVNMTNVVTPTQGNTFLVPNFAPITYADYNPAGSGGTWGTGDAVVQNPALAQGSITASPAVATTAFDIFLGWTTSFQLAATLGAELGESFAEKVDQRVTAAFTAFKATPGNSNYSPAPADGFARPLELGAMELLPDGAVPAAPTTGFTATTVLELVRLVKQQFKVARMPGNPVIVLDSNGFVSAASAGTQSGSSLTRMLGELTGGAVSQAGGSNLSALGNELLSTGKIESVYGCQVMFTTFLQSASRNVDGVSGTPVLVGAYIGDSAIFTVLKEGLQIKTGEVPGGLQMWLTGVGYFGSGVGDKRRGGAINIVQD*
Draft_100137084	F040626	GGCGG	MIDSLGKRYGLLPSEVLNRSNTFDIYIMDAALSYENYVYKKQMNNGVDPTPNYSEEELLAMLNKNKKAQ*
Draft_100137085	F058146	AGGA	MKLSQLSAKPQLVEVSLDDKATVKEFGEPITFHTWDRQPMDIFMKLANSNNDTQSIIGVVKTLILDEEGKQILQDDAMLPTHVLMKAITKVTELLGK*
Draft_100137088	F058142	AGGAG	MPNVVYNVPNEPYVNDEQIIEVLKRDIPKEWNIPIYDEFPSDTEVVRYGIYVSDVHLDERNPHQLGIQYCASIYHAYDTFSITYVSYQDDPYNRAVNAIIGNLVTALKDDGEQLFDGYFERNFDQVRTYGPTQAEKHTWTFRLLRMEFNT*
Draft_100137089	F002260	AGGAG	VSVPYQRISNATVQDIMFYDPAAERRAAALNVDWDRYFKVASQEWLYKMEFGWWQNYCDTVVGATYYNNLPNGSLISAFNPNLLIKNDQTLIRLDVFGAILVFYESLVTDVSNMNEVDVKNYDFAKERCDREWTKAQELSNWYDLFQDSPNGPTSKLEENWLADVNYFNGSRRYF*