Scaffold Draft_10001696

Overview

Basic Information

• Taxon OID: 3300001580
• Scaffold ID: Draft_10001696
• Source Dataset Name: Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Suncor taillings pond 6 2012TP6_6
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: McGill University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 23028
• Total Scaffold Genes: 28
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 6 (21.43%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location

• Location Name: Suncor Tailings Pond 6, Northern Alberta, Canada
• Coordinates
  • Lat. (^o): 57.05
  • Long. (^o): -111.55
  • Depth (m): 6

Associated Families

Family	Category	Number of Sequences	3D Structure?
F007838	Metagenome / Metatranscriptome	344	Y
F014212	Metagenome	265	Y
F021450	Metagenome	219	N

Sequences

Protein ID	Family	RBS	Sequence
Draft_1000169616	F021450	N/A	MISLFALLLLFSIEIQAQVTNVLNNFYTVWVKPAIPIIGGLVLIVGALANIGKVLGDSRDYRGFITSIVLYLAVYFCLVGIVAFIMAG*
Draft_1000169618	F007838	N/A	MRTLFTFLLFLLTCEIYGQVPAGLTVVVKNPAWQAEDAAKESLEKADRIRQITTLTEQVNTQKESLQAIRDATEKLRKINRKVANYHNLELAIAQVSDSYTRVLGSLKAINEHNCFKPSEYHMLSESMMGLLSQTSYSITTLTVVLTDNFSEMSDGERLLNMNQAIKELRENIGVINSAIIEVEILDNQRMQLRTLNYINSIFK*
Draft_1000169623	F014212	N/A	MKIRLILAFLIISVSASAQLIHVEGSKALGINYAYVKNGFNVSSRITFYKSGNLAYRASLDYERVXFDLSKASVVYANPELMYTFYTLGEKVFFNVNGGILTGAEFISNSILDKKKRQFFIGENIGVCTEYFISNKIMLNLDLDQRFFQMSKVGKASFIIKLGINYNFY*