Scaffold JGI20167J15610_10059957

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold JGI20167J15610_10059957

Scaffold JGI20167J15610_10059957

Overview

Basic Information
Taxon OID	3300001542 Open in IMG/M
Scaffold ID	JGI20167J15610_10059957 Open in IMG/M
Source Dataset Name	Nasutitermes corniger crop gut microbial community from laboratory colony in Florida, USA - Nc150C
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	563
Total Scaffold Genes	1 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut → Cubitermes And Nasutitermes Termite Gut Microbial Communities From Max Planck Institute For Terrestrial Microbiology, Germany

Source Dataset Sampling Location
Location Name	laboratory colony in Florida, USA
Coordinates	Lat. (^o)	26.0625	Long. (^o)	-80.2332	Alt. (m)		Depth (m)
Location on Map

Zoom:	Powered by OpenStreetMap^©

Associated Families

Family	Category	Number of Sequences	3D Structure?
F010098	Metagenome	308	Y

Sequences

Protein ID	Family	RBS	Sequence
JGI20167J15610_100599571	F010098	N/A	LYSPTDAQVNCLKNNFKIYIKINIKTALAYFGAVTPSSGSALLVLAKVTVVKIAN*

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