Scaffold KiloMoana_1045071

Overview

Basic Information

• Taxon OID: 3300001515
• Scaffold ID: KiloMoana_1045071
• Source Dataset Name: Hydrothermal vent plume microbial communities from Kilo Moana, Pacific Ocean, of black smokers
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1069
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Associated Families: 3

Taxonomy: All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Hydrothermal Vent Plume → Hydrothermal Vent Plume Microbial Communities From Kilo Moana, Pacific Ocean, Of Black Smokers

Source Dataset Sampling Location

• Location Name: Kilo Moana, ELSC, Pacific Ocean
• Coordinates
  • Lat. (^o): -20.064428
  • Long. (^o): -176.171974
  • Depth (m): 2600

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000730	Metagenome / Metatranscriptome	917	Y
F001922	Metagenome	617	Y
F026590	Metagenome	197	Y

Sequences

Protein ID	Family	RBS	Sequence
KiloMoana_10450711	F026590	N/A	QRDIVETIKVEKGNPIDILVELVTVITGTNTRQEGYCGLAPYLKTAVLKRFTPAGMALHLHADLSHADGVFKYKKDRVSLLGQ*
KiloMoana_10450712	F000730	GAG	LVNEFIPPEIIPLVWFSCIAVTVYVFFRVFSSTLKEKFRQTNLTRKKSEGSGHTDGQIDDLINNAPRILNEINKTIAEQKAQGVSDEQMKGIYQKKQMLELVTNNAEVINIIGKPIIKKLLGFVKSI*
KiloMoana_10450713	F001922	GGA	MIQKLLVEEGMKRGLKASREYSVSVLGYDFIGLISRLAIFFITGFLINSYFQATIQGGIWLNSLAGFFGLNFPTTLPEWTTKLFTTGFHNITFWQIVQVISVLIVVMEYMQYDRMLKEKQEKPNITTGAVFAMIGLGLSLITFPQIIQ