Scaffold JGI20171J14444_1038667

Overview

Basic Information

• Taxon OID: 3300001345
• Scaffold ID: JGI20171J14444_1038667
• Source Dataset Name: Nasutitermes corniger P4 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P4
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 577
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Prosorrhyncha → Heteroptera → Euheteroptera → Neoheteroptera → Panheteroptera → Cimicomorpha → Cimicoidea → Miridae → Mirinae → Mirini → Lygus → Lygus hesperus (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut → Cubitermes And Nasutitermes Termite Gut Microbial Communities From Max Planck Institute For Terrestrial Microbiology, Germany

Source Dataset Sampling Location

• Location Name: laboratory colony in Florida, USA
• Coordinates
  • Lat. (^o): 26.0625
  • Long. (^o): -80.2332

Associated Families

Family	Category	Number of Sequences	3D Structure?
F007176	Metagenome	356	Y

Sequences

Protein ID	Family	RBS	Sequence
JGI20171J14444_10386672	F007176	N/A	MVVAILTGHAAVRGHLYTVGLFDGDPTCRFCRKETETVLHIICCCEALARQRYNVFGNPLVEPKDISTASVRDLCLFIRGTGLLNVY*