Scaffold BBAY94_10023263

Overview

Basic Information

• Taxon OID: 3300000949
• Scaffold ID: BBAY94_10023263
• Source Dataset Name: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1738
• Total Scaffold Genes: 6
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (33.33%)
• Novel Protein Genes: 4
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (25.00%)
• Associated Families: 4

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities

Source Dataset Sampling Location

• Location Name: Botany Bay, Sydney, NSW, Australia
• Coordinates
  • Lat. (^o): -33.966629
  • Long. (^o): 151.166614

Associated Families

Family	Category	Number of Sequences	3D Structure?
F030088	Metagenome	186	Y
F033798	Metagenome	176	Y
F039588	Metagenome	163	Y
F055653	Metagenome	138	Y

Sequences

Protein ID	Family	RBS	Sequence
BBAY94_100232631	F030088	GGA	MGMFKLNIVTKTKMSAKEMSRTLITLDRSEVFTMGRKTYVPFSAVSVVFNSKGATKKFDKDLDCIVHPTRGKLFCLPANVEQFITVK*
BBAY94_100232632	F033798	N/A	MKHYYELRDPNRFAEVLDRMMHDEPMKWQGWMMDMETNTLSLEAFRKWLSAEWYEKQLLKDDFPEFHFLDDDMLVLDMQHELLASLN*
BBAY94_100232633	F039588	N/A	MEDLKFKTAAQVMNHSNTPNRDPDFYTNYNKGFAMAINGFRISVQWGPGNYVDREIRYDNHDAPMQHNIWGCDTAEVMIWGRNDGPLFDLVPFDFDTEEYDKEMFEAQGGHIDQVFGHCSSDCVAKMIGCLAHSDDDDPRRAIAQIYNASFNNKG*
BBAY94_100232635	F055653	N/A	MQSYIQAKEMREMIKDITNPQFNIANVPFEQRVECLNQLSNARDNGLITQDEMLNIACVQWFDQYKIAKLK*