Scaffold BBAY92_12243262

Overview

Basic Information

• Taxon OID: 3300000947
• Scaffold ID: BBAY92_12243262
• Source Dataset Name: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 5853
• Total Scaffold Genes: 19
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 8 (42.11%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities

Source Dataset Sampling Location

• Location Name: Botany Bay, Sydney, NSW, Australia
• Coordinates
  • Lat. (^o): -33.966629
  • Long. (^o): 151.166614

Associated Families

Family	Category	Number of Sequences	3D Structure?
F011527	Metagenome	290	Y
F024421	Metagenome	206	Y
F059351	Metagenome	134	Y

Sequences

Protein ID	Family	RBS	Sequence
BBAY92_1224326213	F059351	N/A	MTQKIKVTAEVEIENDVAIDSLAMDTSLGLLGTIKSYDIEYERNTDGSFKLKPKLTYKQVKEKYFLQNLSIDTIRTQIISAFMTQHKDKFHDFAVEAIDEAVLRVEFVEIPEQDQELATEILNDEYYTEVLSKKDLKEKHGIE*
BBAY92_1224326216	F011527	N/A	MLVYFQFRRCGYYAHGLIESENLDVAAKALWSEHVKTFKWEPQLNYIPENMNTLTVEEYKYGARSDGKTEPEAKPGGEMGK*
BBAY92_1224326217	F024421	AGG	MEKLNQKRSLEAKWASEFIANGAVTVEMVNISKEVKKLEQEIKEDSEKQI*