Scaffold BBAY92_10009900

Overview

Basic Information

• Taxon OID: 3300000947
• Scaffold ID: BBAY92_10009900
• Source Dataset Name: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2534
• Total Scaffold Genes: 7
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 4 (57.14%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Associated Families: 3

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities

Source Dataset Sampling Location

• Location Name: Botany Bay, Sydney, NSW, Australia
• Coordinates
  • Lat. (^o): -33.966629
  • Long. (^o): 151.166614

Associated Families

Family	Category	Number of Sequences	3D Structure?
F049283	Metagenome / Metatranscriptome	147	N
F062247	Metagenome / Metatranscriptome	131	N
F072845	Metagenome / Metatranscriptome	121	N

Sequences

Protein ID	Family	RBS	Sequence
BBAY92_100099001	F072845	N/A	MSGEKLTINDDGSVTEIEFDDYDFGGGYTYHPSPYVLPASEDIATSNIFSMSHDIDGKMRITGDDADIEINGISLKDTLHSLQERMAILEPNPALEAEFKELRDIRQKYIELERNLLEK
BBAY92_100099003	F062247	N/A	MFKSKAEIDSMFGDNDAIAGLVIAICATLFDNGVRHVHVGGLMRLLGVEQEKAVEQDDKVFELPDNFYDQIEQMGFEKIDDSQLSIPKNVILH*
BBAY92_100099006	F049283	AGG	MKDVQKVVHTAYDIWAAAVYAQRINKGYYKEDEFNADGECECVREANRTVAKNALALGGKISVEDRCKGGEIRKFISSRLMVTAITRDLNDFQQSLSRAVELDEFVVPQDRMLIGIVNSQIAQYERAMKEEQLTKDYVYGTYGKIKERLDVELKPVSRFWLTDWGTFRYNAITKDGYKTSFYYRDKLEIGDAVKVRGTVTKHTNDTTTINRVKVI*