Scaffold Draft_10379133

Overview

Basic Information

• Taxon OID: 3300000558
• Scaffold ID: Draft_10379133
• Source Dataset Name: Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: McGill University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 7994
• Total Scaffold Genes: 12
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 8 (66.67%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Associated Families: 3

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location

• Location Name: Syncrude, Ft. McMurray, Alberta
• Coordinates
  • Lat. (^o): 57.02
  • Long. (^o): -111.55

Associated Families

Family	Category	Number of Sequences	3D Structure?
F023360	Metagenome / Metatranscriptome	210	Y
F026558	Metagenome	197	Y
F057213	Metagenome / Metatranscriptome	136	Y

Sequences

Protein ID	Family	RBS	Sequence
Draft_103791331	F023360	AGGAG	MAYVLGGANNEADGFTTAIANFALRAMHESTGLVEFTNVVTPNQGNQYLVPNFAPITYQDYNPAAAPTTGGFGVGGAVEQNPSLAQESITATPAVAATAFDVFYAWTTSFQLAASLGGELGESYGEKVDQRVCAAFAGFKATPSNTNYATSADGFNRVLELGAMELVPDGVTPVASTPGFTTNTVLELVRLVKQNYKVARLPGTPIIVLDSNGDDGVIGSSYTRLLAELTGGAVSQSGGANLSALGNELLSTGRIESAYGCSIA
Draft_103791332	F057213	AGGA	MIENEVSQNQETDSGIVGNDTASGSNNVNPGAIRKSTTSSILNALSQASGQEFQSVEAALAYVARTAKNPVAPSQPVETQEDNNTRIGRVPQEENDLTEQFQKLRQELASKERSLAQKELDSEIMRSMGDRFDPDLTDYALQKVKANIKFKQDGSYAIVNNKGQERYAMDGNPLTLKGLIDEVAQGNPKLLKSGSQSSGSGMRPGQSQFAGAELDAIPDYSKDPAAFNAWASKNGLGKRVGLKGASVTASSSLNTRTIL*
Draft_103791333	F026558	N/A	MKATDLIKKNPIYTATYEQMKAQELAYLGGYEFKTYVRKKRPSEDSNLWQDLVQNTVAQPICRYIVDTINDVLFEPGVKRELNFATPQGTYINPDNIEWSELFLLDCDLQNRSLDAFMENLGDLTSIYGHCWVVVDMPKEGEGNLGRPYVVAVNPLEVWDWSWEYYGGKPLVKYVKIKETEDEHNIYLKCFHLGEEGFPSYWVSYRVNKNIAKNDVEEIGRGNYPPGMALPVFIAYGRRDPRSIDVGVSDIDSAADAQREYYKLECEAYSSIQFAKTIIRADKGVTIPVHAGAIVRATSGQVEAIEVGLQDVDKIIAKQQDILEQIEALTGLGGLRNSKNQIASGVAIIEERKQLHRLAKSKARLLETVEEMIFTFAARFMNMRWAGEVIYNTDYEAHDTNYRIALMAKAKELVPQNAIIDSLIIQEVISMLAPQEDIPQYEKAYLDSLPTSELKDLMIKNNEQVLSRDLGDQIPTAKEFGEKEITTNDGYEVDDENNDDYMGSTNTVYTGQSYETQQAIAQQLNTMNTGR*