Scaffold Draft

Basic Information
Taxon OID	3300000558 Open in IMG/M
Scaffold ID	Draft_10017629 Open in IMG/M
Source Dataset Name	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	McGill University
Sequencing Status	Permanent Draft

Basic Information

Taxon OID

3300000558 Open in IMG/M

Scaffold ID

Draft_10017629 Open in IMG/M

Source Dataset Name

Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

McGill University

Sequencing Status

Permanent Draft

Scaffold Components
Scaffold Length (bps)	7659
Total Scaffold Genes	13 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	9 (69.23%)
Novel Protein Genes	3 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	2 (66.67%)
Associated Families	3

Scaffold Components

Scaffold Length (bps)

7659

Total Scaffold Genes

13 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

9 (69.23%)

Novel Protein Genes

3 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

2 (66.67%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Ecosystem

Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location
Location Name	Syncrude, Ft. McMurray, Alberta
Coordinates	Lat. (^o)	57.02	Long. (^o)	-111.55	Alt. (m)	Depth (m)
Location on Map

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Source Dataset Sampling Location

Location Name

Syncrude, Ft. McMurray, Alberta

Coordinates

Lat. (^o)

57.02

Long. (^o)

-111.55

Alt. (m)

Depth (m)

Location on Map

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Family	Category	Number of Sequences	3D Structure?
F023848	Metagenome	208	Y
F024119	Metagenome / Metatranscriptome	207	Y
F042895	Metagenome	157	Y

Family

Sequences

Protein ID	Family	RBS	Sequence
Draft_1001762913	F024119	AGGAG	MAYVLGGANNEADGFTTAISNFALRAMHESQGLVNMTNVVTPTQGNTFLVPNFAPITYADYNPAGSGGTWGTGDAVVQNPALAQGSITASPAVATTAFDIFLGWTT
Draft_100176294	F042895	AGG	MRKLIDKPFTSHIKNLDKMVTELSPHMTELEIDACIGYMFTLKDTKWDINPSPEDCKTQLEIMLGKDRFLEICKAWSQKNQKFLTVFGTMKYKRKSDGTLWDGLDDTDNADDYEKVYI*
Draft_100176299	F023848	N/A	MKIDIPLFGEQNTVLADWLTTDKHCIDIVPVGSGKTFLAAIALPIFASDPRYHRGKDIIYSAPTGAMIKSLIWEPLKQSCINYFGLVDGKDINNSELTIKFPNGVFIRCKSAEQRENLRGLNVGVWVADEAALYTQDTLQEITNRLRPKVGQPETAGRLIVISTPNGAGPLYELFKFAMERPDKYVVRHFNYLQMRSGNREFIEEQKRIISPLKFQQDYMCSFENVADQFFYAWDKNKYTVDNIVDRGGELYTFHDWNKRVMCAAVAQVTNPYTKDGKIEILKSYAIRDCGTEGIAQAIRQDFPKRRISSIIDMSGTQTNRDTTSPFGVTDRTIIEQYGFTVINNRKSNPLIADTDNTSNAFISRGGLVVKKDDKFLLEALQTYHFEDATRKNLVKYTEQKYAHIDGLGDCIRYGIHYLFPIQHESTGIAEYVGMDQRLARRVRPGLEHMPDSPLYPGGPTWDEILNGDETEKDFMTWG*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Draft_10017629

Overview

Ecosystem & Geography

Associated Families

Sequences