Basic Information | |
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Taxon OID | 3300000531 Open in IMG/M |
Scaffold ID | CNBas_1001874 Open in IMG/M |
Source Dataset Name | Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNB_Illumina_Assembled |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Beijing Genomics Institute (BGI), Lifesequencing S.L. |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1136 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Acidobacteria | (Source: UniRef50) |
Source Dataset Ecosystem |
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Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere → Quercus Rhizosphere Microbial Communities From Sierra Nevada National Park, Granada, Spain |
Source Dataset Sampling Location | ||||||||
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Location Name | Sierra Nevada National Park, Granada, Spain | |||||||
Coordinates | Lat. (o) | 36.94932 | Long. (o) | -3.4176 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F032436 | Metagenome | 180 | Y |
Protein ID | Family | RBS | Sequence |
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CNBas_10018741 | F032436 | GAG | MAISNELSSDVAVAILATKKSPQELKQLKDIILEVHSTLQKMSEETRAFHSGKEQPQKGTKGTSA* |
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