Scaffold OneHSP_7476CDRAFT_1007085

Overview

Basic Information

• Taxon OID: 3300000342
• Scaffold ID: OneHSP_7476CDRAFT_1007085
• Source Dataset Name: Ferrous microbial mat communities from One Hundred Spring Plain, Yellowstone National Park, USA - T=74-76
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Draft

Scaffold Components

• Scaffold Length (bps): 1418
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified → Ferrous Mat → Saline, Thermophilic Phototrophic And Chemotrophic Mat Microbial Communities From Various Locations In Usa And Mexico

Source Dataset Sampling Location

• Location Name: One Hundred Spring Plain, Yellowstone National Park, Wyoming, USA
• Coordinates
  • Lat. (^o): 44.7330426
  • Long. (^o): -110.7089928
  • Depth (m): 2286

Associated Families

Family	Category	Number of Sequences	3D Structure?
F079395	Metagenome / Metatranscriptome	116	N

Sequences

Protein ID	Family	RBS	Sequence
OneHSP_7476CDRAFT_10070851	F079395	GAGG	VRLKLAKEFELTPIDRKAISALLEGIIVALTRLGYLDQDRANELIEKLNNNVLNVGQLRLLTDVVVNWFAVCGYFSE