Scaffold Draft_c141258

Overview

Basic Information

• Taxon OID: 3300000052
• Scaffold ID: Draft_c141258
• Source Dataset Name: Coal bed methane well microbial communities from Alberta, Canada
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: McGill University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 17357
• Total Scaffold Genes: 33
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 4 (12.12%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Biotransformation → Microbial Solubilization Of Coal → Unclassified → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location

• Location Name: Alberta, Canada
• Coordinates
  • Lat. (^o): 52.119
  • Long. (^o): -113.78
  • Depth (m): 686

Associated Families

Family	Category	Number of Sequences	3D Structure?
F032099	Metagenome / Metatranscriptome	181	Y
F033794	Metagenome	176	Y

Sequences

Protein ID	Family	RBS	Sequence
Draft_14125813	F032099	N/A	MGFEKGNKLGKGRPPKVEEEKVNNIFLKALGQLYNKETAEETKIAFVKSTLMESQRGQLFIAEHIFGKPKEVIEATHNVNDFNIKDIFKIGNKSE*
Draft_14125822	F033794	N/A	MNIVKIYKGEDTFPTFIIESEEAIDSSQYVNLWTCTEKIYIDEELIEVIYHIK*