Basic Information | |
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Taxon OID | 2140918027 Open in IMG/M |
Scaffold ID | contig05311 Open in IMG/M |
Source Dataset Name | Hypersaline microbial communities from Antarctic Deep Lake - 36m 3.0um, 0.8um, 0.1um pool |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1499 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (40.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp. | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline → Hypersaline Microbial Communities From Antarctic Deep Lake |
Source Dataset Sampling Location | ||||||||
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Location Name | Deep Lake Antarctica | |||||||
Coordinates | Lat. (o) | -68.54 | Long. (o) | 78.18 | Alt. (m) | Depth (m) | 36 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F045454 | Metagenome | 153 | Y |
Protein ID | Family | RBS | Sequence |
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ADL36m2_01149570 | F045454 | N/A | MRLWRVLETIEKRLSGIEGKLEKVTRLEERVNKHEQLMARFGKRLDSGDERIRKVEMWQSEHNPEMIISTLKANADTIDILRGKIGDLEDTVNVNRGHKDIGKGILMWTSSILAAIIIYQATRGMW |
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