Scaffold FWIRA_GRAM18401C8AKN

Overview

Basic Information

• Taxon OID: 2124908009
• Scaffold ID: FWIRA_GRAM18401C8AKN
• Source Dataset Name: Soil microbial communities from sample at FACE Site Metagenome WIR_Amb2
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Draft

Scaffold Components

• Scaffold Length (bps): 510
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil Microbial Communities From Face And Otc Sites In Usa

Source Dataset Sampling Location

• Location Name: Wisconsin Rhinelander (WIR)
• Coordinates
  • Lat. (^o): 45.68
  • Long. (^o): -89.63

Associated Families

Family	Category	Number of Sequences	3D Structure?
F031613	Metagenome / Metatranscriptome	182	Y
F065592	Metagenome / Metatranscriptome	127	Y

Sequences

Protein ID	Family	RBS	Sequence
FWIRA_01716770	F065592	N/A	DLTDATSPVLVRYAQEAIAYASAALAGWARGSPLAAKWDDAASDAIEDLVSASVRREQNSARRRKPFSSRSGYTPF
FWIRA_01716780	F031613	AGGAG	MAITINLSPLNIDGSGNNLTYAVATLTFSGNYVVGGDTLDFTQIEDKL