Scaffold FWIRElOz_GKZ9IRQ02GVAZY

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold FWIRElOz_GKZ9IRQ02GVAZY

Scaffold FWIRElOz_GKZ9IRQ02GVAZY

Overview

Basic Information
Taxon OID	2124908007 Open in IMG/M
Scaffold ID	FWIRElOz_GKZ9IRQ02GVAZY Open in IMG/M
Source Dataset Name	Soil microbial communities from sample at FACE Site Metagenome WIR_ElevOz2
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Draft

Scaffold Components
Scaffold Length (bps)	500
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (50.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil Microbial Communities From Face And Otc Sites In Usa

Source Dataset Sampling Location
Location Name	Wisconsin Rhinelander (WIR)
Coordinates	Lat. (^o)	45.68	Long. (^o)	-89.63	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F024301	Metagenome / Metatranscriptome	206	N

Sequences

Protein ID	Family	RBS	Sequence
FWIRElOz_03354240	F024301	GGA	MIKLSTKEDIALLVAEASEMFEETGCVPDVDGKKVRAEKIVPHAKRYILETIDNPRASYDTTMWHSPGYTLVLSWLSQKWLKNCQKLA

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