Scaffold FNTS007_GKN1E7E02HFUWP

Overview

Basic Information

• Taxon OID: 2119805009
• Scaffold ID: FNTS007_GKN1E7E02HFUWP
• Source Dataset Name: Soil microbial communities from sample at FACE Site NTS_007 Nevada Test Site
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Draft

Scaffold Components

• Scaffold Length (bps): 550
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Soil → Sand → Desert → Soil → Soil Microbial Communities From Face And Otc Sites In Usa

Source Dataset Sampling Location

• Location Name: Nevada Test Site FACE
• Coordinates
  • Lat. (^o): 36.766667
  • Long. (^o): -115.95

Associated Families

Family	Category	Number of Sequences	3D Structure?
F094653	Metagenome / Metatranscriptome	105	Y

Sequences

Protein ID	Family	RBS	Sequence
FNTS007_06843670	F094653	GGA	VGQKGGGVSASEVLAELDRLVISVFYRSFGLGPGPQTRLEVGLGRERAYPELLRALEARTTELLRVASFEPSRHTRGTYVRRPGGSA