Scaffold MXTR_Contig14198

Overview

Basic Information

• Taxon OID: 2088090020
• Scaffold ID: MXTR_Contig14198
• Source Dataset Name: Sample MX_TR1
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: National Research Council of Canada
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 522
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Eurotiales → Aspergillaceae → Aspergillus → Aspergillus subgen. Fumigati → Aspergillus fumigatus (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Mammals → Digestive System → Stomach → Endoperitrophic Space → Rumen → Rumen Microbial Communities Of Musk Oxen From Alaska

Source Dataset Sampling Location

• Location Name: Fairbanks, Alaska
• Coordinates
  • Lat. (^o): 64.880776
  • Long. (^o): -147.869984

Associated Families

Family	Category	Number of Sequences	3D Structure?
F028974	Metagenome / Metatranscriptome	190	Y

Sequences

Protein ID	Family	RBS	Sequence
MXTR_00061040	F028974	N/A	MIQTHSYNCIRGLDIDFVKQYIFTATNKGDISVLDLGSPGKEKLIKEISYFGGNIEIRIIRFNAIDRELYTGDQKGKITVWSLKSGQSIYAWQAHADAITQMQYFPKRRQLLSMAKDKKVVYWQLPDNWVSDSIRKFQDEKVREINNTRAIERLQRTQKKEGDDDSSDDSLDG