Scaffold OSPB_contig01082

Basic Information
Taxon OID	2077657023 Open in IMG/M
Scaffold ID	OSPB_contig01082 Open in IMG/M
Source Dataset Name	Hot spring microbial communities from One Hundred Springs Plain, Yellowstone National Park, Wyoming, USA - sample OSP_B
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Permanent Draft

Basic Information

Taxon OID

2077657023 Open in IMG/M

Scaffold ID

OSPB_contig01082 Open in IMG/M

Source Dataset Name

Hot spring microbial communities from One Hundred Springs Plain, Yellowstone National Park, Wyoming, USA - sample OSP_B

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

DOE Joint Genome Institute (JGI)

Sequencing Status

Permanent Draft

Scaffold Components
Scaffold Length (bps)	3240
Total Scaffold Genes	10 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	6 (60.00%)
Novel Protein Genes	5 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	3 (60.00%)
Associated Families	5

Scaffold Components

Scaffold Length (bps)

3240

Total Scaffold Genes

10 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

6 (60.00%)

Novel Protein Genes

5 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

3 (60.00%)

Associated Families

Taxonomy
All Organisms → Viruses → Predicted Viral	(Source: DeepVirFinder)

Taxonomy

All Organisms → Viruses → Predicted Viral

(Source: DeepVirFinder)

Source Dataset Ecosystem
Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Hot Spring Microbial Communities From Yellowstone National Park, Wyoming, Usa

Source Dataset Ecosystem

Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Hot Spring Microbial Communities From Yellowstone National Park, Wyoming, Usa

Source Dataset Sampling Location
Location Name	One Hundred Springs Plain, Yellowstone National Park
Coordinates	Lat. (^o)	44.7315	Long. (^o)	-110.711389	Alt. (m)	Depth (m)
Location on Map

Zoom:	Powered by OpenStreetMap^©

Source Dataset Sampling Location

Location Name

One Hundred Springs Plain, Yellowstone National Park

Coordinates

Lat. (^o)

44.7315

Long. (^o)

-110.711389

Alt. (m)

Depth (m)

Location on Map

Zoom:

Associated Families

Family	Category	Number of Sequences	3D Structure?
F061983	Metagenome / Metatranscriptome	131	Y
F075084	Metagenome / Metatranscriptome	119	N
F076263	Metagenome / Metatranscriptome	118	Y
F080245	Metagenome	115	N
F080247	Metagenome / Metatranscriptome	115	Y

Sequences

Protein ID	Family	RBS	Sequence
OSPB_00779280	F061983	AGTAG	LINEEGVLSEQEFEHVKKTRIYKGMKVLEIKDLGFDSFWRFTHYYELVAVSEGGGLFDCYYSDVIDVKKLKDVGAIVVKEQDIQPVRTMKTLVAKWYNKKLVEEEKAFETCTKFIM
OSPB_00779290	F080247	N/A	MIVWGKTIECIIDADVNYLNGELFNSQFRVKGKFLVFGNLYTLEKTTPGGETIQICSPVDATFMAYYQGMVAVMSFYIKERDIYANVSLTDPDTIKEFMTMSTYYRKYGVSIPNILDKIMYRKVPT
OSPB_00779300	F076263	GGA	MPSAEDLSAILDDLEDLCARIPDGVTFHPTLEIRRHHANEEATYIKFDCRDHKYTLTIVRTGVAKTTRVSSREQLYRRLFPEYSPGYSGSYTEEFWGGE
OSPB_00779330	F080245	N/A	VIFVWSARVIIPGFRDEVFVSPALINMYAELTEDVYEVGMFMVPHKGHALLFLPTMVIKVDDELMKNLEQTTIEDLNIPLNTISNVFT
OSPB_00779350	F075084	GAG	VRPCRKDLCLLYSLGADYAKLIDFTNQNFQGKLFRAGARAMIYARRLMASWYGYDTGVLIETALRRILRRSITYCNIMRRLGLESEYCRRYTQYNGVPCDLVSVFTVETTYADILHMIVNYNSENVSKVLTKMTEMCSTYEVR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters