Scaffold FACEMD_F1OL2UU01DP7PJ

Overview

Basic Information

• Taxon OID: 2035918006
• Scaffold ID: FACEMD_F1OL2UU01DP7PJ
• Source Dataset Name: Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2+
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Draft

Scaffold Components

• Scaffold Length (bps): 563
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil Microbial Communities From Face And Otc Sites In Usa

Source Dataset Sampling Location

• Location Name: Maryland Wetland Ecosystem, MD
• Coordinates
  • Lat. (^o): 38.85
  • Long. (^o): -76.53
  • Depth (m): .01

Associated Families

Family	Category	Number of Sequences	3D Structure?
F079969	Metagenome	115	N

Sequences

Protein ID	Family	RBS	Sequence
FACEMDE_3420040	F079969	GGAGG	MARPVRTAVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADDFAVHRRAVGAVSPS