NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F106188

Metagenome / Metatranscriptome Family F106188

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F106188
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 140 residues
Representative Sequence VLIXGGXRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Number of Associated Samples 91
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 14.00 %
% of genes near scaffold ends (potentially truncated) 42.00 %
% of genes from short scaffolds (< 2000 bps) 78.00 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (57.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(18.000 % of family members)
Environment Ontology (ENVO) Unclassified
(41.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(64.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 18.42%    β-sheet: 7.89%    Coil/Unstructured: 73.68%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF04972BON 7.00
PF13649Methyltransf_25 3.00
PF01668SmpB 2.00
PF00293NUDIX 2.00
PF13489Methyltransf_23 2.00
PF13847Methyltransf_31 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0691tmRNA-binding proteinPosttranslational modification, protein turnover, chaperones [O] 2.00


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms57.00 %
UnclassifiedrootN/A43.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886012|MBSR1b_contig_2587141Not Available898Open in IMG/M
2162886012|MBSR1b_contig_6786802Not Available856Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0881969All Organisms → cellular organisms → Bacteria → Acidobacteria1223Open in IMG/M
3300002459|JGI24751J29686_10041040Not Available957Open in IMG/M
3300004156|Ga0062589_100360162Not Available1160Open in IMG/M
3300004479|Ga0062595_100400127All Organisms → cellular organisms → Bacteria → Acidobacteria983Open in IMG/M
3300005288|Ga0065714_10120478Not Available1351Open in IMG/M
3300005290|Ga0065712_10020880Not Available1547Open in IMG/M
3300005293|Ga0065715_10034112All Organisms → cellular organisms → Bacteria → Acidobacteria1662Open in IMG/M
3300005294|Ga0065705_10216746All Organisms → cellular organisms → Bacteria → Acidobacteria1336Open in IMG/M
3300005295|Ga0065707_10621843Not Available678Open in IMG/M
3300005328|Ga0070676_10158036All Organisms → cellular organisms → Bacteria → Acidobacteria1457Open in IMG/M
3300005333|Ga0070677_10133698Not Available1135Open in IMG/M
3300005334|Ga0068869_100364614Not Available1181Open in IMG/M
3300005343|Ga0070687_100128252All Organisms → cellular organisms → Bacteria → Acidobacteria1461Open in IMG/M
3300005353|Ga0070669_100157283All Organisms → cellular organisms → Bacteria → Acidobacteria1763Open in IMG/M
3300005354|Ga0070675_100084972All Organisms → cellular organisms → Bacteria → Acidobacteria2643Open in IMG/M
3300005356|Ga0070674_100385235Not Available1141Open in IMG/M
3300005364|Ga0070673_100090351All Organisms → cellular organisms → Bacteria2501Open in IMG/M
3300005367|Ga0070667_100265623All Organisms → cellular organisms → Bacteria1538Open in IMG/M
3300005438|Ga0070701_10099802All Organisms → cellular organisms → Bacteria → Acidobacteria1606Open in IMG/M
3300005459|Ga0068867_100143869All Organisms → cellular organisms → Bacteria → Acidobacteria1866Open in IMG/M
3300005543|Ga0070672_102162695Not Available501Open in IMG/M
3300005548|Ga0070665_100276476All Organisms → cellular organisms → Bacteria → Acidobacteria1681Open in IMG/M
3300005564|Ga0070664_100166870All Organisms → cellular organisms → Bacteria → Acidobacteria1951Open in IMG/M
3300005718|Ga0068866_10080470All Organisms → cellular organisms → Bacteria → Acidobacteria1748Open in IMG/M
3300005719|Ga0068861_100429803All Organisms → cellular organisms → Bacteria → Acidobacteria1178Open in IMG/M
3300007004|Ga0079218_10398751All Organisms → cellular organisms → Bacteria → Acidobacteria1171Open in IMG/M
3300009094|Ga0111539_11081335Not Available932Open in IMG/M
3300009156|Ga0111538_10086555All Organisms → cellular organisms → Bacteria → Acidobacteria3986Open in IMG/M
3300009156|Ga0111538_11057309Not Available1027Open in IMG/M
3300009162|Ga0075423_11642983Not Available691Open in IMG/M
3300009553|Ga0105249_10379829All Organisms → cellular organisms → Bacteria → Acidobacteria1438Open in IMG/M
3300009610|Ga0105340_1085694Not Available1253Open in IMG/M
3300011417|Ga0137326_1007637All Organisms → cellular organisms → Bacteria → Acidobacteria2499Open in IMG/M
3300012895|Ga0157309_10011330All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1797Open in IMG/M
3300012897|Ga0157285_10005660All Organisms → cellular organisms → Bacteria → Acidobacteria2286Open in IMG/M
3300012904|Ga0157282_10086305Not Available851Open in IMG/M
3300012913|Ga0157298_10047977Not Available971Open in IMG/M
3300012943|Ga0164241_11225133Not Available555Open in IMG/M
3300013306|Ga0163162_10154146All Organisms → cellular organisms → Bacteria → Acidobacteria2417Open in IMG/M
3300014326|Ga0157380_10192709All Organisms → cellular organisms → Bacteria → Acidobacteria1801Open in IMG/M
3300014745|Ga0157377_10017740All Organisms → cellular organisms → Bacteria → Acidobacteria3687Open in IMG/M
3300015201|Ga0173478_10005881All Organisms → cellular organisms → Bacteria2934Open in IMG/M
3300015371|Ga0132258_11496111All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1705Open in IMG/M
3300015371|Ga0132258_13063812All Organisms → cellular organisms → Bacteria → Acidobacteria1157Open in IMG/M
3300015372|Ga0132256_102731894Not Available593Open in IMG/M
3300015373|Ga0132257_101119962Not Available994Open in IMG/M
3300015374|Ga0132255_100997460All Organisms → cellular organisms → Bacteria → Acidobacteria1256Open in IMG/M
3300015374|Ga0132255_102827817Not Available742Open in IMG/M
3300017792|Ga0163161_10057459All Organisms → cellular organisms → Bacteria → Acidobacteria2827Open in IMG/M
3300018067|Ga0184611_1114787All Organisms → cellular organisms → Bacteria → Acidobacteria941Open in IMG/M
3300018073|Ga0184624_10051154All Organisms → cellular organisms → Bacteria → Acidobacteria1673Open in IMG/M
3300018469|Ga0190270_10090984All Organisms → cellular organisms → Bacteria → Acidobacteria2302Open in IMG/M
3300018476|Ga0190274_10212676All Organisms → cellular organisms → Bacteria → Acidobacteria1714Open in IMG/M
3300018481|Ga0190271_10009345All Organisms → cellular organisms → Bacteria6834Open in IMG/M
3300019356|Ga0173481_10029975All Organisms → cellular organisms → Bacteria → Acidobacteria1736Open in IMG/M
3300019361|Ga0173482_10083140Not Available1125Open in IMG/M
3300021082|Ga0210380_10082286All Organisms → cellular organisms → Bacteria → Acidobacteria1413Open in IMG/M
3300025901|Ga0207688_10006481All Organisms → cellular organisms → Bacteria6371Open in IMG/M
3300025903|Ga0207680_10046775All Organisms → cellular organisms → Bacteria → Acidobacteria2560Open in IMG/M
3300025907|Ga0207645_10034581All Organisms → cellular organisms → Bacteria3247Open in IMG/M
3300025918|Ga0207662_10466761Not Available865Open in IMG/M
3300025923|Ga0207681_10121887All Organisms → cellular organisms → Bacteria → Acidobacteria1913Open in IMG/M
3300025923|Ga0207681_11326477Not Available604Open in IMG/M
3300025925|Ga0207650_10103673All Organisms → cellular organisms → Bacteria → Acidobacteria2193Open in IMG/M
3300025926|Ga0207659_10466484All Organisms → cellular organisms → Bacteria → Acidobacteria1065Open in IMG/M
3300025930|Ga0207701_10046547All Organisms → cellular organisms → Bacteria → Proteobacteria4010Open in IMG/M
3300025933|Ga0207706_10007733All Organisms → cellular organisms → Bacteria9921Open in IMG/M
3300025934|Ga0207686_11473276Not Available561Open in IMG/M
3300025937|Ga0207669_10409477Not Available1064Open in IMG/M
3300025945|Ga0207679_10139750All Organisms → cellular organisms → Bacteria → Acidobacteria1956Open in IMG/M
3300025972|Ga0207668_11261761Not Available665Open in IMG/M
3300025986|Ga0207658_10311894All Organisms → cellular organisms → Bacteria → Acidobacteria1359Open in IMG/M
3300025986|Ga0207658_11617154Not Available592Open in IMG/M
3300026035|Ga0207703_11088254Not Available768Open in IMG/M
3300026075|Ga0207708_10024014All Organisms → cellular organisms → Bacteria → Proteobacteria4611Open in IMG/M
3300026089|Ga0207648_10116043All Organisms → cellular organisms → Bacteria → Acidobacteria2353Open in IMG/M
3300026095|Ga0207676_11023515Not Available814Open in IMG/M
3300028379|Ga0268266_10508577All Organisms → cellular organisms → Bacteria → Acidobacteria1151Open in IMG/M
3300028381|Ga0268264_11060886Not Available818Open in IMG/M
3300028592|Ga0247822_10222764Not Available1417Open in IMG/M
3300028608|Ga0247819_10352279Not Available838Open in IMG/M
3300028812|Ga0247825_10000442All Organisms → cellular organisms → Bacteria26284Open in IMG/M
3300028812|Ga0247825_10102225All Organisms → cellular organisms → Bacteria1940Open in IMG/M
3300028812|Ga0247825_10481264Not Available882Open in IMG/M
3300031538|Ga0310888_10119168All Organisms → cellular organisms → Bacteria → Acidobacteria1369Open in IMG/M
3300031547|Ga0310887_10012452All Organisms → cellular organisms → Bacteria3155Open in IMG/M
3300031562|Ga0310886_10195677Not Available1099Open in IMG/M
3300031847|Ga0310907_10063439Not Available1481Open in IMG/M
3300031858|Ga0310892_10220644All Organisms → cellular organisms → Bacteria → Acidobacteria1152Open in IMG/M
3300031858|Ga0310892_10636953Not Available725Open in IMG/M
3300031908|Ga0310900_10042929All Organisms → cellular organisms → Bacteria → Acidobacteria2600Open in IMG/M
3300031944|Ga0310884_10828041Not Available567Open in IMG/M
3300032000|Ga0310903_10300683Not Available789Open in IMG/M
3300032013|Ga0310906_11397287Not Available513Open in IMG/M
3300032017|Ga0310899_10028038All Organisms → cellular organisms → Bacteria → Acidobacteria1895Open in IMG/M
3300032179|Ga0310889_10308457Not Available765Open in IMG/M
3300034664|Ga0314786_175101Not Available518Open in IMG/M
3300034692|Ga0373917_0058000Not Available603Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil18.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere12.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere8.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere5.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere5.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.00%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.00%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.00%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.00%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886012Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300002459Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6Host-AssociatedOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005288Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300011417Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2EnvironmentalOpen in IMG/M
3300012895Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012904Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300034664Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034692Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.3EngineeredOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
MBSR1b_0923.000080602162886012Miscanthus RhizosphereRNGANGLSVLIAGGRRGATRLLFPPLVIETKEPVTLPDRGSDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFHESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
MBSR1b_0422.000002202162886012Miscanthus RhizosphereWRGATRLLFPPLVIETKEPVTLPDRGSDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFHESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
ICChiseqgaiiDRAFT_088196913300000033SoilVLIVRGWRGAGRLLXPPLVIETKESVALLDRGXDXVDERRRYXRXRSQMCDRSDVVIEEQPHRKDVDIVVAVRGLLLKHSREHANPRLRYFSQVHSDWIRDIIVRPHHRRRLREETFDFRESLVRTGRGAQHWSPGSKSPQKPL*
JGI24751J29686_1004104013300002459Corn, Switchgrass And Miscanthus RhizosphereVLIXGGXRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0062589_10036016223300004156SoilVLIAGGWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0062595_10040012723300004479SoilGWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHDRRRLCEETFDFHESLMRTGRGAQH*
Ga0065714_1012047823300005288Miscanthus RhizosphereLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0065712_1002088023300005290Miscanthus RhizosphereLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHDRRRLCEETFDFHESLMRTGRGAQH
Ga0065715_1003411223300005293Miscanthus RhizosphereVLIAGGRRGATRLLFPPLVIETKEPVTLPDRGSDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0065705_1021674633300005294Switchgrass RhizosphereRGCDPVDERRRYARDRSQMCDRSDVVIQEQPDRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0065707_1062184323300005295Switchgrass RhizosphereGWRGASRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0070676_1015803623300005328Miscanthus RhizosphereVLIVRGQRGATRLLLPPLVIETKESVALLDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFHESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0070677_1013369823300005333Miscanthus RhizosphereVLIAGGRRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0068869_10036461423300005334Miscanthus RhizosphereLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKHVDIVVAVRGLLLKHSREHANPRFRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0070687_10012825233300005343Switchgrass RhizosphereVLIVRGQRGATRLLLPPLVIETKESVALLDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0070669_10015728323300005353Switchgrass RhizosphereLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVRGLLLKHSREHANPRFRYFSQVHSDWIRDVIIRPHHRRRLREDTFDFRESLVRTGRGAQYWSPGSKSLQKPL*
Ga0070675_10008497223300005354Miscanthus RhizosphereVLIAGRWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0070674_10038523523300005356Miscanthus RhizosphereVLIVRGQRGATHLLLPPLVIETKESVALLDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPDRKDVDIVVAVRGLLLKHSREHANPRFRYFSQVHSDWIRDVIIRPHHRRRLREDTFDFRESLVRTGRGAQYWSPGSKSLQKPL*
Ga0070673_10009035133300005364Switchgrass RhizosphereVLIGGGWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFHESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0070667_10026562333300005367Switchgrass RhizosphereVLIGGGWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKHVDIVVAVRGLLLKHSREHANPRFRYFSQVHSDWIRDVIIRPHHRRRLREDTFDFRESLVRTGRGAQYWSPGSKSLQKPL*
Ga0070701_1009980233300005438Corn, Switchgrass And Miscanthus RhizosphereVLIGGGWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVIIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0068867_10014386923300005459Miscanthus RhizosphereLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPDRKDVDIVVAVRGLLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0070672_10216269513300005543Miscanthus RhizosphereDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKHVDIVVAVRGLLLKHSREHANPRFRYFSQVNSDWIRDVIIRPHHRRRLREDTFDFRESLVRTGRGAQYWSPGSKSLQKPL*
Ga0070665_10027647633300005548Switchgrass RhizosphereDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0070664_10016687023300005564Corn RhizosphereVLIVRGQRGATRLPLPPLVIETKESVALLDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0068866_1008047023300005718Miscanthus RhizosphereLLLPPLVIETKEPVALLDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDVIIRPHHRRRLREDTFDFRESLVRTGRGAQYWSHGSKSLQKPL*
Ga0068861_10042980333300005719Switchgrass RhizosphereVLIVRGQRGATHLLLPPLVIETKESVALLDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKHVDIVVAVRGLLLKHSREHANPRFRYFSQVHSDWIRDVIIRPHHRRRLREDTFDFRESLVRTGRGAQYWSPGSKSLQKPL*
Ga0079218_1039875113300007004Agricultural SoilETKEPVALLDRGGDPVDERRRYARDRSQMCDCGDVVIQEQPHRKDVDIVVAVRGLLLKHSRERANPRLRYFSQVHSDRIGDIIVRPHHRRRLREETFDFRESLVRTGRGAQH*
Ga0111539_1108133523300009094Populus RhizosphereLIVRAWRGATRLLLPPLVIETKQPVALLDRGCDPVDERRRYAGDRSQMCDRSDVVVQKQPHRQDVDIVVAVRGLLLKHSREHANPRFRYFSQVHSDWIRDITIRPHHRRRLREDTFDFRESLVRTGRGTQHWSPGSKSL*
Ga0111538_1008655533300009156Populus RhizosphereLIVRAWRGATRLLLPPLVIETKQPVALLDRGCDPVDERRRYAGDRSQMCDRSDVVVQKQPHRQDVDIVVAVRGPLLKHSREHANPRFRYFSQVHSDWIRDITIRPHHRRRLREDAFDFRESLVRTGRGTQHWSPGSKSL*
Ga0111538_1105730923300009156Populus RhizosphereVLIAGGRRGATRLLFPPLVIETKEPVTLPDRGSDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHDRRRLCEETFDFHESLMRTGRGAQH*
Ga0075423_1164298323300009162Populus RhizosphereGGRRGATRLLFPPLVIETKEPVTLPDRGSDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHDRRRLCEETFDFHESLMRTGRGAQH*
Ga0105249_1037982933300009553Switchgrass RhizosphereVIETKEPVALLDRGCDPVDERRRYVRDRSQMCDRSDVVIEEQPHRKDVDIVVAVRGLLLKHSREHANPRLRYFSQVHSDWIRDIIVRPHHRPRLREDTFDFRESLVRTGRGAQYWSPGSKSLQKPL*
Ga0105340_108569423300009610SoilLLFPPLVIETKEPVTLLDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVRGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLREETFDFRESLVRTKRGAQHWSPGRKSLQKPL*
Ga0137326_100763733300011417SoilVLIAGGWRDATRLLLPPLVIETKEPVTLLDRGCDPVDERRRYARDRAQMCDRSDVVIQEQPHRKDVDIVVAVRGPLLKHSREHANPRLRDFSQVHSDWIRDILVRPHHRRRLREETFDFRESLVRTKRGAQRWSPGRKSLQNPCSILATLPS*
Ga0157309_1001133033300012895SoilVLIAGGRRGATRLLFPPLVIETKEPVTLPDRGSDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGLLLKHSREHANPRLRYFSQVHSDWIRDIIIRPHHRRRLREDTFDFRESLVRTGRGA
Ga0157285_1000566023300012897SoilLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPDRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0157282_1008630513300012904SoilRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQH*
Ga0157298_1004797713300012913SoilVLIAGGRRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVRGLLLKHSREHANPRLRYFSQVHSDWIRDIIVRPHHRPRLREDTFDFRESLVRTGRGAQHWSPGSKS
Ga0164241_1122513313300012943SoilVLIAGGWRGAARLLLPPLVIETKEPVALLDRGGDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0163162_1015414633300013306Switchgrass RhizosphereVLIGGGWRGATRLLFPPLVIETKEPVTLPDRGSDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0157380_1019270933300014326Switchgrass RhizosphereLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKHVDIVVAVRGLLLKHSREHANPRFRYFSQVHSDWIRDVIIRPHHRRRLREDTFDFRESLVRTGRGAQHWSPGSKSLQKPL*
Ga0157377_1001774023300014745Miscanthus RhizosphereLLFPTLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0173478_1000588123300015201SoilLFFPPLIIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRQDVDIVVAVGGLLLKHSREHANPRFRYFSQVHSDWIRDIIIRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0132258_1149611113300015371Arabidopsis RhizosphereVLIVRGQRGATRLLLPPLVIETKESVALLDRGCDPVDERRCYARDRSQMCDRSDVVIQEQPHRKHVDIVVAVRGLLLKHSREHANPRFRYFSQVNSDWIRDVIIRPHHRRRLREDTFDFRESLV
Ga0132258_1306381213300015371Arabidopsis RhizosphereVLIAGGRRGATRLLFPPLVIETKEPVTLPDRGSDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFHESLMRTGRGAQHWSPGRKSLQNPCSILATLPS*
Ga0132256_10273189423300015372Arabidopsis RhizosphereLLDRGCDPVDERRRYAGDRSQMCDRSDVVVQKQPHRQDVDIVVAVRGPLLKHSREHANPRFRYFSQVHSDWIRDISIRSHHRRRLRKDTFDFRESLVRTGRGTQHWSPGSKSL*
Ga0132257_10111996223300015373Arabidopsis RhizosphereVLIVRGQRGATRLLLPPLVIETKESVALLDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKHVDIVVAVRGLLLKHSREHANPRFRYFSQVNSDWIRDVIIRPHHRRRLREDTFDFRESLVRTGRGTQHWSPGSKSL*
Ga0132255_10099746013300015374Arabidopsis RhizosphereVLIVRGQRGATRLLLPPLVIETKESVALLDRGCDPVDERRRYAGDRSQMCDRSDVVVQKQPHRQDVDIVVAVRGPLLKHSREHANPRFRYFSQVNSDWIRDVIIRPHHRRRLREDTFDFRESLV
Ga0132255_10282781713300015374Arabidopsis RhizosphereQRGATRLLLPPLVIETKESVALLDRGCDPVDERRCYARDRSQMCDRSDVVIQEQPHRKHVDIVVAVRGLLLKHSREHANPRFRYFSQVHSDWIRDVIIRPHRRRRLREDTFDFRESLVRTGRGAQYWSPGSKSLQKPL*
Ga0163161_1005745953300017792Switchgrass RhizosphereVLIAGGRRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFHESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0184611_111478733300018067Groundwater SedimentETKEPVTLPDRGIDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0184624_1005115433300018073Groundwater SedimentLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHDRRRLCEETFDFRESLMRTGRGAQH
Ga0190270_1009098433300018469SoilVLIVGGGRDATRLLLPPLVIETKEPVTLLDRGCDPVDERRRYARDRAQMCDRSDVVIQEQPHRKDVDIVVAVRGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLREETFDFRESLVRTKRGAQRWSPGRKSLQNPCSILATLPS
Ga0190274_1021267633300018476SoilVLIAGRWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLP
Ga0190271_1000934553300018481SoilVLIAGGWRDATRLLLPPLVIETKEPVTLLDRGCDPVDERRRYARDRAQMCDRSDVVIQEQPHRKDVDIVVAVRGPLLKHSREHANPRLRDFSQVHSDWIRDILVRPHHRRRLREETFDFRESLVRTKRGAQRWSPGRKSLQNPCSILATLPS
Ga0173481_1002997533300019356SoilVLIAGGWRGASRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCHRSDVVIQEQPDRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0173482_1008314023300019361SoilVSIAGGRRGATRLLFPPLVIETKEPVTLPDRGSDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHDRRRLCEETFDFHESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0210380_1008228633300021082Groundwater SedimentRGCDPVDERRRYARDRAQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0207688_1000648133300025901Corn, Switchgrass And Miscanthus RhizosphereLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0207680_1004677523300025903Switchgrass RhizosphereVLIVRGQRGATHLLLPPLVIETKESVALLDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKHVDIVVAVRGLLLKHSREHANPRFRYFSQVHSDWIRDVIIRPHHRRRLREDTFDFRESLVRTGRGAQYWSPGSKSLQKPL
Ga0207645_1003458133300025907Miscanthus RhizosphereVLIGGGWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFHESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0207662_1046676133300025918Switchgrass RhizosphereDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0207681_1012188733300025923Switchgrass RhizosphereVLIAGRWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFHESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0207681_1132647713300025923Switchgrass RhizosphereLSVLIVRGQRGATRLLLPPLVIETKESVALLDRGCDPVDERRCYARDRSQMCDRSDVVIQEQPHRKHVDIVVAVRGLLLKHSREHANPRFRYFSQVHSDWIRDVIIRPHHRRRLREDTFDFRESLVRTGRGAQYWSPGSKSLQKPL
Ga0207650_1010367323300025925Switchgrass RhizosphereVLIGGGWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0207659_1046648413300025926Miscanthus RhizosphereGGGWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0207701_1004654753300025930Corn, Switchgrass And Miscanthus RhizosphereVLIVRGQRGATHLLLPPLVIETKESVALLDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0207706_10007733113300025933Corn RhizosphereMALLDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKHVDIVVAVRGLLLKHSREHANPRLRYFSQVHSDWIRDVIIRPHHRRRLREDTFDFRESLVRTGRGAQYWSPGSKSLQKPL
Ga0207686_1147327623300025934Miscanthus RhizosphereTRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0207669_1040947723300025937Miscanthus RhizosphereVLIAGGWRGATRLLFPPLVIETKEPVALLDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0207679_1013975033300025945Corn RhizosphereGLSVLIGGGWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0207668_1126176123300025972Switchgrass RhizosphereKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKHVDIVVAVRGLLLKHSREHANPRFRYFSQVHSDWIRDVIIRPHHRRRLREDTFDFRESLVRTGRGAQYWSPGSKSLQKPL
Ga0207658_1031189433300025986Switchgrass RhizosphereGGWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0207658_1161715423300025986Switchgrass RhizosphereIETKESVALLDRGCDPVDERRCYARDRSQMCDRSDVVIQEQPHRKHVDIVVAVRGLLLKHSREHANPRFRYFSQVHSDWIRDVIIRPHHRRRLREDTFDFRESLVRTGRGAQYWSPGSKSLQKPL
Ga0207703_1108825423300026035Switchgrass RhizosphereVLIAGRWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHDRRRLCEETFDFHESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0207708_1002401443300026075Corn, Switchgrass And Miscanthus RhizosphereVLIGGGWRGATRLLFPPLVIETKEPVTLPDRGSDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFHESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0207648_1011604323300026089Miscanthus RhizosphereVLIAGRWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPDRKDVDIVVAVRGLLLKHSREHANPRFRYFSQVHSDWIRDVIIRPHHRRRLREDTFDFRESLVRTGRGAQYWSPGSKSLQKPL
Ga0207676_1102351523300026095Switchgrass RhizosphereVLIAGRWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0268266_1050857733300028379Switchgrass RhizosphereTRLLFPPLVIETKEPVTLPDRGSDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0268264_1106088623300028381Switchgrass RhizosphereVLIVRGQRGATHLLLPPLVIETKESVALLDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKHVDIVVAVRGLLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFHESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0247822_1022276423300028592SoilVLIAGRWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGSKSPQKPL
Ga0247819_1035227913300028608SoilIAGGWRGASRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCHRSDVVIQEQPDRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0247825_10000442143300028812SoilVLIVRGWRAATRLLLPPLVIETKEPVALLDRGGDPVDERRRYARDRSQMCDRSGVVIQEQPHRKDVDIVVAVRGLLLKHSREHANPCLRYFSQVHSDWIRDIIVRPHHRRRLREETFDFRESLVRTGRGAQHWSPGRKSLQKPL
Ga0247825_1010222533300028812SoilVLIAGRWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCHRSDVVIQEQPDRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFHESL
Ga0247825_1048126423300028812SoilPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVRGPLLKHSREHANPRLRDFSQVHSDWIRDILVRPHHRRRLREETFDFRESLVRTKRGAQRWSPGRKSLQNPCSILATLPS
Ga0310888_1011916823300031538SoilVLIVRGWRGAGRLLLPPLVIETKESVALLDRGGDSVDERRRYARDRSQMCDRGDVVIQEQPHRKDVDIVVAVRGLLLKHSREHANPRLRYFSQVHSDWVRDIIVRPHHRRRLREETFDFRESLVRTGRGAQHWSPGSKSPQKPL
Ga0310887_1001245263300031547SoilCDPVDERRRYVRNRSQMCDRSDVVIEEQPHRKDVDIVVAVRGLLLKHSREHANPRLRYFSQVHSDWIRDIIVRPHHRPRLREDTFDFRESLVRTGRGAQHWSPGSKSLQKPL
Ga0310886_1019567723300031562SoilVLIAGGWRGASRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0310907_1006343923300031847SoilVLIAGGRRGATRLLFPPLVIETKEPVTLPDRGSDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLREETFDFRESLVRTKRGAQHWSPGRKSLQNPCSILATLPS
Ga0310892_1022064433300031858SoilLLLPPLVIETKEPVALLDRGCDPVDERRRYVRNRSQMCDRSDVVIEEQPHRKDVDIVVAVRGLLLKHSREHANPRLRYFSQVHSDWIRDIIVRPHHRPRLREDTFDFRESLVRTGRGAQHWSPGSKSLQKPL
Ga0310892_1063695323300031858SoilGANGLSVLIAGRWRGATRLLFPPLVIETKEPVTLPDRGSDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHDRRRLCEETFDFHESLMRTGRGAQH
Ga0310900_1004292953300031908SoilEPVTLLDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0310884_1082804113300031944SoilNGANGLNGANGLSVLIAGRWRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFRESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0310903_1030068313300032000SoilRRGATRLLFPPLVIETKEPVTLPDRGSDPVDERRRYARDRSQMCDRSDVVIQEQPHRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHHRRRLCEETFDFHESLMRTGRGAQHWSPGRKSLQNPCSILATLPS
Ga0310906_1139728713300032013SoilVALLDRGCDPVDERRRYVRNRSQMCDRSDVVIEEQPHRKDVDIVVAVRGLLLKHSREHANPRLRYFSQVHSDWIRDIIVRPHHRPRLREDTFDFRESLVRTGRGAQHWSPGSKSLQKPL
Ga0310899_1002803833300032017SoilVLIAGGRRGATRLLFPPLVIETKEPVTLPDRGCDPVDERRRYARDRSQMCHRSDVVIQEQPDRKDVDIVVAVGGPLLKHSREHANPRLRYFSQVHSDWIRDILVRPHDRRRLCEETFDFHESLMRTGRGAQH
Ga0310889_1030845723300032179SoilTKEPVALLDRGCDPVDERRRYVRDRSQMCDRSDVVIEEQPHRKDVDIVVAVRGLLLKHSREHANPRLRYFSQVHSDWIRDIIVRPHHRPRLREDTFDFRESLVRTGRGAQHWSPGSKSLQKPL
Ga0314786_175101_151_5163300034664SoilLLLPPLVIETKEPVALLDRGCDPVDERRRYVRDRSQMCDRSDVVIEEQPHRKDVDIVVAVRGLLLKHSREHANPRLRYFSQVHSDWIRDIIVRPHHRPRLREDTFDFRESLVRTGRGAQHWS
Ga0373917_0058000_157_5913300034692Sediment SlurryVLIVRGWRGAGRLLLPPLVIETKESVALLDRGGDSVDERRRYARDRSQMCDRGDVVIQEQPHRKDVDIVVAVRGLLLKHSREHANPRLRYFSQVHSDWVRDIIVRPHHRRRLREETFDFRESLVRTGRGAQHWSPGRKSLQKPL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.