NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F106159

Metagenome / Metatranscriptome Family F106159

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F106159
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 57 residues
Representative Sequence GYGRVEVDAAGAQGAEVLDHLPQPGDFRDQVFVQSEKRRGGALPAVPSATPVPANPSGV
Number of Associated Samples 88
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.00 %
% of genes near scaffold ends (potentially truncated) 95.00 %
% of genes from short scaffolds (< 2000 bps) 83.00 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(26.000 % of family members)
Environment Ontology (ENVO) Unclassified
(36.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(63.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 29.89%    β-sheet: 0.00%    Coil/Unstructured: 70.11%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF01202SKI 69.00
PF01761DHQ_synthase 16.00
PF01220DHquinase_II 3.00
PF09285Elong-fact-P_C 2.00
PF08501Shikimate_dh_N 1.00
PF00117GATase 1.00
PF02616SMC_ScpA 1.00
PF00180Iso_dh 1.00
PF13685Fe-ADH_2 1.00
PF03703bPH_2 1.00
PF01728FtsJ 1.00
PF03780Asp23 1.00
PF02618YceG 1.00
PF00465Fe-ADH 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG07573-dehydroquinate dehydrataseAmino acid transport and metabolism [E] 3.00
COG0169Shikimate 5-dehydrogenaseAmino acid transport and metabolism [E] 1.00
COG029323S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJTranslation, ribosomal structure and biogenesis [J] 1.00
COG03373-dehydroquinate synthetaseAmino acid transport and metabolism [E] 1.00
COG0371Glycerol dehydrogenase or related enzyme, iron-containing ADH familyEnergy production and conversion [C] 1.00
COG1189Predicted rRNA methylase YqxC, contains S4 and FtsJ domainsTranslation, ribosomal structure and biogenesis [J] 1.00
COG1302Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) familyFunction unknown [S] 1.00
COG1354Chromatin segregation and condensation protein Rec8/ScpA/Scc1, kleisin familyReplication, recombination and repair [L] 1.00
COG1454Alcohol dehydrogenase, class IVEnergy production and conversion [C] 1.00
COG1559Endolytic transglycosylase MltG, terminates peptidoglycan polymerizationCell wall/membrane/envelope biogenesis [M] 1.00
COG1979Alcohol dehydrogenase YqhD, Fe-dependent ADH familyEnergy production and conversion [C] 1.00
COG3402Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domainFunction unknown [S] 1.00
COG3428Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domainFunction unknown [S] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.00 %
UnclassifiedrootN/A1.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090004|P1_DRAFT_NODE_307291_len_10338_cov_14_928419All Organisms → cellular organisms → Bacteria10388Open in IMG/M
3300000880|AL20A1W_1020493All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300000886|AL3A1W_1175924All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300001401|JGI20189J14885_1009165All Organisms → cellular organisms → Bacteria1626Open in IMG/M
3300001536|A1565W1_10532858All Organisms → cellular organisms → Bacteria762Open in IMG/M
3300001593|JGI12635J15846_10003940All Organisms → cellular organisms → Bacteria12848Open in IMG/M
3300001593|JGI12635J15846_10827804All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300002914|JGI25617J43924_10087565All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300005166|Ga0066674_10565204All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300005167|Ga0066672_10878949All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300005179|Ga0066684_10124711All Organisms → cellular organisms → Bacteria1607Open in IMG/M
3300005187|Ga0066675_11051104All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300005332|Ga0066388_103061815All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300005446|Ga0066686_10318388All Organisms → cellular organisms → Bacteria1059Open in IMG/M
3300005468|Ga0070707_101870665All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium567Open in IMG/M
3300005536|Ga0070697_100076940All Organisms → cellular organisms → Bacteria2744Open in IMG/M
3300005540|Ga0066697_10315891All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300005552|Ga0066701_10123469All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia1536Open in IMG/M
3300005552|Ga0066701_10239322All Organisms → cellular organisms → Bacteria1121Open in IMG/M
3300005552|Ga0066701_10346751All Organisms → cellular organisms → Bacteria920Open in IMG/M
3300005553|Ga0066695_10044142All Organisms → cellular organisms → Bacteria2631Open in IMG/M
3300005559|Ga0066700_11068201All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300005568|Ga0066703_10077178All Organisms → cellular organisms → Bacteria1921Open in IMG/M
3300005575|Ga0066702_10236302All Organisms → cellular organisms → Bacteria1113Open in IMG/M
3300006032|Ga0066696_10396898All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300006034|Ga0066656_10421812All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300006050|Ga0075028_100491395All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300006050|Ga0075028_100837661All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300006797|Ga0066659_11921623All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300006800|Ga0066660_11492575All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300006806|Ga0079220_10264037All Organisms → cellular organisms → Bacteria1039Open in IMG/M
3300006903|Ga0075426_10752738All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium732Open in IMG/M
3300006904|Ga0075424_101080858All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300007255|Ga0099791_10307163All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300007265|Ga0099794_10618919All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300009012|Ga0066710_104261270All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300009089|Ga0099828_10000042All Organisms → cellular organisms → Bacteria57738Open in IMG/M
3300009090|Ga0099827_10201324All Organisms → cellular organisms → Bacteria1656Open in IMG/M
3300009137|Ga0066709_102093231All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300009174|Ga0105241_11598892All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300010333|Ga0134080_10469140All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium593Open in IMG/M
3300010361|Ga0126378_12136149All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300011270|Ga0137391_10433001All Organisms → cellular organisms → Bacteria1120Open in IMG/M
3300011270|Ga0137391_10646144All Organisms → cellular organisms → Bacteria883Open in IMG/M
3300011270|Ga0137391_10985016All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300011271|Ga0137393_11768241All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300011992|Ga0120146_1005536All Organisms → cellular organisms → Bacteria3105Open in IMG/M
3300011994|Ga0120157_1012499All Organisms → cellular organisms → Bacteria2185Open in IMG/M
3300011998|Ga0120114_1009523All Organisms → cellular organisms → Bacteria2235Open in IMG/M
3300012096|Ga0137389_10038112All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes3549Open in IMG/M
3300012096|Ga0137389_10954482All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300012205|Ga0137362_10356761All Organisms → cellular organisms → Bacteria1266Open in IMG/M
3300012206|Ga0137380_10845176All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300012351|Ga0137386_10102887All Organisms → cellular organisms → Bacteria2021Open in IMG/M
3300012351|Ga0137386_11165275All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300012361|Ga0137360_10020205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia4434Open in IMG/M
3300012363|Ga0137390_10513941All Organisms → cellular organisms → Bacteria1171Open in IMG/M
3300012363|Ga0137390_10663938All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300013501|Ga0120154_1143566All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300013765|Ga0120172_1109889All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300013770|Ga0120123_1092552All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300014157|Ga0134078_10592687All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium529Open in IMG/M
3300014823|Ga0120170_1060684All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300015359|Ga0134085_10153992All Organisms → cellular organisms → Bacteria976Open in IMG/M
3300018431|Ga0066655_10299005All Organisms → cellular organisms → Bacteria1047Open in IMG/M
3300018468|Ga0066662_10632654All Organisms → cellular organisms → Bacteria1008Open in IMG/M
3300018468|Ga0066662_12660579All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300019879|Ga0193723_1062918All Organisms → cellular organisms → Bacteria1079Open in IMG/M
3300020004|Ga0193755_1213359All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300021046|Ga0215015_10333895All Organisms → cellular organisms → Bacteria1325Open in IMG/M
3300021046|Ga0215015_10418470All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300021344|Ga0193719_10186523All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300024283|Ga0247670_1014780All Organisms → cellular organisms → Bacteria1404Open in IMG/M
3300025544|Ga0208078_1008280All Organisms → cellular organisms → Bacteria2521Open in IMG/M
3300025928|Ga0207700_10267329All Organisms → cellular organisms → Bacteria1467Open in IMG/M
3300025929|Ga0207664_11744163All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300026308|Ga0209265_1217032All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300026310|Ga0209239_1184734All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300026325|Ga0209152_10085043All Organisms → cellular organisms → Bacteria1170Open in IMG/M
3300026334|Ga0209377_1054084All Organisms → cellular organisms → Bacteria1782Open in IMG/M
3300026342|Ga0209057_1031418All Organisms → cellular organisms → Bacteria2780Open in IMG/M
3300026527|Ga0209059_1147870Not Available859Open in IMG/M
3300026537|Ga0209157_1225767All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium767Open in IMG/M
3300026547|Ga0209156_10011355All Organisms → cellular organisms → Bacteria5783Open in IMG/M
3300026552|Ga0209577_10023117All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes5474Open in IMG/M
3300026552|Ga0209577_10318541All Organisms → cellular organisms → Bacteria1155Open in IMG/M
3300027633|Ga0208988_1080888All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300027787|Ga0209074_10434402All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300027842|Ga0209580_10104508All Organisms → cellular organisms → Bacteria1372Open in IMG/M
3300027862|Ga0209701_10730877All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300027875|Ga0209283_10005755All Organisms → cellular organisms → Bacteria7140Open in IMG/M
3300027882|Ga0209590_10478361All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium805Open in IMG/M
3300028792|Ga0307504_10063983All Organisms → cellular organisms → Bacteria1087Open in IMG/M
3300029636|Ga0222749_10290183All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300031720|Ga0307469_11204737All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300031754|Ga0307475_10231972All Organisms → cellular organisms → Bacteria1478Open in IMG/M
3300031820|Ga0307473_11419592All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300031962|Ga0307479_10815650All Organisms → cellular organisms → Bacteria908Open in IMG/M
3300032180|Ga0307471_100590177All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300032261|Ga0306920_100398039All Organisms → cellular organisms → Bacteria2048Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil26.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil20.00%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost10.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil7.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.00%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090004Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1EnvironmentalOpen in IMG/M
3300000880Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300000886Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-65cm-3A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001401Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012EnvironmentalOpen in IMG/M
3300001536Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011992Permafrost microbial communities from Nunavut, Canada - A23_65cm_12MEnvironmentalOpen in IMG/M
3300011994Permafrost microbial communities from Nunavut, Canada - A7_65cm_12MEnvironmentalOpen in IMG/M
3300011998Permafrost microbial communities from Nunavut, Canada - A30_35cm_6MEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300013501Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25MEnvironmentalOpen in IMG/M
3300013765Permafrost microbial communities from Nunavut, Canada - A30_80cm_6MEnvironmentalOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014823Permafrost microbial communities from Nunavut, Canada - A3_80cm_0MEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300024283Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11EnvironmentalOpen in IMG/M
3300025544Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027633Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
P1_DRAFT_001098402088090004SoilMSVMGRMLGYGRVEVDAAGAQGAEVLDHLPNPGAFRDQVFMQSEKRRGGGPAAAPANPSG
AL20A1W_102049313300000880PermafrostGYGRVEVDAAGAQGAEVLDHLPNPGVFRDQVFVQSERRRTGGAPSVQPHTSGV*
AL3A1W_117592413300000886PermafrostRVEIDAAGAQGAEILDPLPNPGAFRDQVFMQTEKRRGAPAAAPTTPASPSGI*
JGI20189J14885_100916533300001401Arctic Peat SoilAGAQGAEVLNHLPNPGAFRDQVFMQSEKRRGGGMNAAPSAMPVNPGGV*
A1565W1_1053285813300001536PermafrostQDCTTKQSLVGRMLGYGRVEVDAAGAQGAEVLDHLPNPGVFRDQVFVQSERRRGGAPPGQPRASGV*
JGI12635J15846_1000394013300001593Forest SoilQDCTTRTSVMGRMLGYGRVEVDAAGAQGAEVLDHLPNPGTFRDQVFMQSEKRRGGGAPSAMPANPSGV*
JGI12635J15846_1082780423300001593Forest SoilGYGRVEVDAAGAQGAEVLDHLPNPGSFRDQVFMQSERRRGVAPAAAPSMPANPSGI*
JGI25617J43924_1008756513300002914Grasslands SoilEVDAAGAQGAEVLDHLPNPGAFRDQVFMLSERRRGGASGAPAPANPSGV*
Ga0066674_1056520413300005166SoilVEVDAAGAQGAEVLDHLPQPGDFRDQVFVQSEKRRGGAPAAAAQAAVPANPSGV*
Ga0066672_1087894913300005167SoilYGRVEVDAAGAQGAEVLDHLPHPGTFRDQVFVLSEQRRGGAPSIPAPANPSGV*
Ga0066684_1012471113300005179SoilQSVIGRIFGYGRVEVDAAGAQGAEVLDHLPKPGDFRDQVFMLSEKRRGGGTPAAPPTTAVPANPSGL*
Ga0066675_1105110423300005187SoilSIFGRILGYGRVEVDAAGSQGAEVLDHLPKPGEFRDQVFVQSERRRGGGLPAAPAAAPIPANPSGV*
Ga0066388_10306181513300005332Tropical Forest SoilEVDAAGAQGAEVLANLPNPGKFRDQVFVLSEKRRGGAAAAPMPSNPSGI*
Ga0066686_1031838813300005446SoilLGRIIGYGRVEVDAAGAQGAEILDHLPKPGDFRDQVFVQSEKRRGGGATTPAAGAPVPANPSGV*
Ga0070707_10187066523300005468Corn, Switchgrass And Miscanthus RhizosphereGRVEVDAAGAQGAEVLDHLPRPGDFRDQVFVQSEKRRGGVTPAAQTPPPMAANPSGV*
Ga0070697_10007694013300005536Corn, Switchgrass And Miscanthus RhizosphereAEILDHLPKPGDFRDQVFVQSEKRRGGAQVPQSAPVPANPSGV*
Ga0066697_1031589133300005540SoilQDCTTRQSLLGRIIGYGRVEVDAAGAQGAEILDHLPQPGDFRDQVFVQSEKRRGGAQVPASAPVPANTSGV*
Ga0066701_1012346913300005552SoilRVEVDAAGAQGAEVLNHLPHPGEFRDQVFMQSERRRGAAPSQAAPANPSGV*
Ga0066701_1023932233300005552SoilAAGAQGAEVLDHLPKPGEFRDQVFVQSEKRRGGMAPSAPSAAPVPSNPSGI*
Ga0066701_1034675133300005552SoilVDAAGAQGAEILDHLPKPGDFRDQVFVQSEKRRGGAQVPASAPVPANTSGV*
Ga0066695_1004414253300005553SoilRQSLLGRIIGYGRVEVDAAGAQGAEVLDHLPKPGDFRDQVFVQSEKRRGGVATTPAAGAPMPANPSGV*
Ga0066700_1106820123300005559SoilYGRVEVDAAGAQGAEVLNHLPHPGEFRDQVFMQSERRRGGAPSQAAPANPSGV*
Ga0066703_1007717843300005568SoilDAAGAQGAEVLDHLPHPGTFRDQVFVLSEQRRGGAPSIPAPANPSGV*
Ga0066702_1023630213300005575SoilDAAGAQGAEVLDYLPKPGEFRDQVFIQSEKRRGGGTSAAPTGAHVPANSSGV*
Ga0066696_1039689833300006032SoilLGYGRVEVDAAGAQGAEVLDHLPQPGDFRDQVFVHSEKRRVGALAAAPSAPVPANPSGV*
Ga0066656_1042181233300006034SoilGRVEVDAAGAQGAEILDHLPQPGDFRDQVFVQSEKRRGGAQVPASAPVPANTSGV*
Ga0075028_10049139523300006050WatershedsQSLIGRMLGYGRVEVDAAGAQGAEVLDHLPNPDVFRDQVFVQTERRRTGGAPSVQPHTSGV*
Ga0075028_10083766123300006050WatershedsDCMTKQSVLGRVLGYGRVEVDAAGAQGAEVLDALPSPGTFRDQVFVQSERRRGGAAPGAPSPANPGGV*
Ga0066659_1192162323300006797SoilYGRVEVDAAGAQGAEVLDHLPKPGDFRDQVFMLPEKRRGGGTPAAPPTTAVPANPSGL*
Ga0066660_1149257523300006800SoilGAQGAEVLDHLPRPGDFRDQVFVQSERRRGGVVPAVPAVAAAMPANPSGV*
Ga0079220_1026403733300006806Agricultural SoilILSYGRVEVDAAGSQGAEILLHLPRPGQFRDQVFTQSEKRRGGGVPASPAAAPLPANPSGV*
Ga0075426_1075273823300006903Populus RhizosphereMIGYGRVEVDAAGAQGAEVLNHLPKPGEFRDHVFVQSERRRGGVGPAATPPPVAANPSGV
Ga0075424_10108085833300006904Populus RhizosphereMLGYGRVEVDAAGAQGAEVLDHLPSPGDFRDQVFVHSEKRRTGAVSAPAAAPVPANPSGV
Ga0099791_1030716333300007255Vadose Zone SoilGAQGAEVLNPLPSPGQFRDQVFVQSERRRGGAPSPAAPANPSGV*
Ga0099794_1061891923300007265Vadose Zone SoilVDAAGAQGAEVLDHLPHPGDFRDQVFTQSEKRRGGGVPAAPSTTPLPANPSGV*
Ga0066710_10426127013300009012Grasslands SoilQGAEVLDHLPKPGDFRDQVFVQSEKRRGGAVATAPSPAPASANTSGV
Ga0099828_10000042633300009089Vadose Zone SoilGAQGAEVLDYIAKPGQFRDQVFVQSEKRRGGGMPAAPAGAPMPANPSGV*
Ga0099827_1020132413300009090Vadose Zone SoilKQTLIGRMLGYGRVEVDAAGAQGAEILEHLPNPGQFRDQVFVQSERRRGGSPSSPAPANPSGV*
Ga0066709_10209323133300009137Grasslands SoilQGAEVLDYLPNPGEFRDQVFVQSEKRRGGGTPSAPAGAPVPVNHSGV*
Ga0105241_1159889223300009174Corn RhizosphereGRMLGYGRVEVDAAGAQGAEILNHLPNPGVFRDQVFVQSERRRGGPASVQPHTSGV*
Ga0134080_1046914023300010333Grasslands SoilLGRIIGYGRVEVDAAGAQGAEVLDHLPKPGDFRDQVFVQSERRRGGVATTPAAGAPVPANPSGV*
Ga0126378_1213614923300010361Tropical Forest SoilGRVEVDAAGAQGAEVLDYLPAPGSFRDQVFVQSEKRRGGAPASTTPMPANPSGV*
Ga0137391_1043300133300011270Vadose Zone SoilYGRVEVDAAGAQGAEVLDHMPNPGAFRDQVFMLSERRRGGASGAPAPANPSGV*
Ga0137391_1064614413300011270Vadose Zone SoilTTKQTLVGRILGYGRVEVDAAGAQGAEVLDHLPNPGAFRDQVFMLSERRRGGASGAPAPANPSGV*
Ga0137391_1098501613300011270Vadose Zone SoilRVEVDAAGAQGAEVLNPLPSPGQFRDQVFVQSERRRGGAPSPAAPPANPSGV*
Ga0137393_1176824113300011271Vadose Zone SoilYGRVEVDAAGAQGAEVLDHLPNPGAFRDQVFMLSERRRGGASGAPAPANPSGV*
Ga0120146_100553623300011992PermafrostXXXLGYGRVEVDAAGAQGAEVLDHLPNPGVFRDQVFVQSERRRTGGAPSVQPHTSGV*
Ga0120157_101249913300011994PermafrostGRMLGYGRVEVDAAGAQGAEVLDHLPNPGVFRDQVFVQSERRRTGGAPSVQPHTSGV*
Ga0120114_100952313300011998PermafrostAGAQGAEILDHLPNPGAFRDQVFMQTEKRRGAPAAAPTTPASPSGI*
Ga0137389_1003811263300012096Vadose Zone SoilGRMLGYGRVEVDAAGAQGAEVLDHLPGPGAFRDQVFMLSERRRGGPSGAPAPANPSGV*
Ga0137389_1095448233300012096Vadose Zone SoilDAAGAQGAEVLNPLPSPGQFRDQVFVQSERRRGGATSPAAPPANPSGV*
Ga0137362_1035676113300012205Vadose Zone SoilEVDAAGAQGAEVLDHLPHPAEFRDQVFVQSERRRGGAPSSAAPANPSGV*
Ga0137380_1084517613300012206Vadose Zone SoilQDCTTKQSLVGRMLGYGRVEVDAAGAQGAEVLDHLPNPGVFRDQVFVQSEKRRTGGPAVQPHPSGI*
Ga0137386_1010288743300012351Vadose Zone SoilYGRVEVDAAGAQGAEVLDHLPKPGDFRDQVFVQSEKRRGGGVAAVTSPAPVPANPSGV*
Ga0137386_1116527513300012351Vadose Zone SoilQGAEVLDHLPKPGDFRDQVFMLSEKRRGGGSPAAPPTTAVPANPSGL*
Ga0137360_10020205103300012361Vadose Zone SoilAGAQGAEVLDHMPNPGAFRDQVFMLSERRRGGASGAPAPANPSGV*
Ga0137390_1051394133300012363Vadose Zone SoilCATKQSLFGRMLGYGRVEVDAAGAQGAEVLDHLPNPSVFRDQVFVLSEKRRGGTSAAAPVNPGGI*
Ga0137390_1066393813300012363Vadose Zone SoilKQTLIGRILGYGRVEVDAAGAQGAEVLNPLPSPGQFRDQVFVQSERRRGGAPSPAAPPANPSGV*
Ga0120154_114356623300013501PermafrostGYGRVEVDAAGAQGAEVLDHLPNPGAFRDQVFVQSERRRTGGAPSVQPHPSGV*
Ga0120172_110988923300013765PermafrostFGRMLGYGRVEVDAAGAQGAEVLDHLPNPGAFRDQVFVQSERRRTGGAPSVQPHPSGV*
Ga0120123_109255213300013770PermafrostYGRVEVDAAGAQGAEVLDHLPNPGAFRDQVFVQSERRRTGGAPSVQPHPSGV*
Ga0134078_1059268713300014157Grasslands SoilGYGRVEVDAAGAQGAEILDHLPKPGDFRDQVFVQSEKRRGGVATTPAAGAPMPANPSGV*
Ga0120170_106068413300014823PermafrostAAGAQGAEVLEHLPNPGSFRDQVFMQSEKRRGGGPAAAPEMPANPSGV*
Ga0134085_1015399233300015359Grasslands SoilRQSLLGRIIGYGRVEVDAAGAQGAEILDHLPQPGDFRDQVFVQSEKRRGGAQVPASAPVPANTSGV*
Ga0066655_1029900533300018431Grasslands SoilYGRVEVDAAGAQGAEILDHLPKPGDFRDQVFVQSEKRRGGGATTPAAGAPVPANPSGV
Ga0066662_1063265433300018468Grasslands SoilGYGRVEVDAAGAQGAEVLDHLPQPGDFRDQVFVQSEKRRGGALPAVPSATPVPANPSGV
Ga0066662_1266057913300018468Grasslands SoilRVEIEPAGPQGAEVLDYFPKPGDFRDQVFVQSEKRRGGGTPAPSGSAMPANPSGI
Ga0193723_106291833300019879SoilCTTKQSLVGRILGYGRVEVDAAGAQGAEVLDHLPNPDVFRDQVFVQTERRRGGSPSTQPHPSGV
Ga0193755_121335923300020004SoilRVQDCTTKMSLLGRMLGYGRVEVDAAGAQGAEVLDHLPDPGGFRDQVFMLSEKRRGVAPAGAPPVPANPSGV
Ga0215015_1033389513300021046SoilMGRMLGYGRVEVDAAGAQGAEVLDHLPNPGTFRDQVFMQSEKRRGGGSPAAPAMPSNPSG
Ga0215015_1041847023300021046SoilMLGYGRVEVDAAGAQGAEVLNPLPSPGQFRDQVFVQSERRRGGAPSPAAPANPSGV
Ga0193719_1018652313300021344SoilVEVDSAGADGPEVLSHLPNPSSFRDQVFVESEKRRSGGAAVQPHPSGV
Ga0247670_101478013300024283SoilDAAGAQGAEILNHLPNPGAFRDQVFMQSEKRRGGGSAAAPAMPANPSGV
Ga0208078_100828053300025544Arctic Peat SoilLGYGRVEVDAAGAQGAEVLNHLPNPGAFRDQVFMQSEKRRGGGASAPSAMPANPSGV
Ga0207700_1026732933300025928Corn, Switchgrass And Miscanthus RhizosphereVDAAGAQGAEILNHLPNPGAFRDQVFMQSEKRRGGGSAAAPAMPANPSGV
Ga0207664_1174416323300025929Agricultural SoilAGAQGAEVLDHLPNPGAFRDQVFMQSEKRRGVAPAAAPSMPANPSGV
Ga0209265_121703213300026308SoilSLIGRILGYGRVEVDAAGAQGAEVLDHLPKPGDFRDQVFVQSEKRRGGGVAVAPSATPVPANPSGV
Ga0209239_118473433300026310Grasslands SoilQSLIGRILGYGRVEVDAAGAQGAEVLDHLPKPGDFRDQVFVQSEKRRGGGVAAVTSPAPVPANPSGV
Ga0209152_1008504313300026325SoilGRVEVDAAGAQGAEVLDHLPKPGDFRDQVFMLSEKRRGGGTPAAPPTTAVPANPSGL
Ga0209377_105408433300026334SoilRILGYGRVEVDAAGAQGAEVLDHLPKPGEFRDQVFVQSEKRRGGMAPSAPSAAPVPSNPSGI
Ga0209057_103141853300026342SoilDAAGAQGAEILDHLPNPGNFRDQVFTESEKRRGGPAPTATPAKPVPAHPSGV
Ga0209059_114787033300026527SoilEIDAAGSQGAEVLDHLPKPGEFRDQVFVQSERRRGGGLPAAPAAAPIPANPSGV
Ga0209157_122576733300026537SoilRIIGYGRVEVDAAGAQGAEILDHLPKPGDFRDQVFVQSEKRRGGGATTPAAGAPVPANPSGV
Ga0209156_10011355113300026547SoilQDCTTNQSLVGRVLGYGRVEVDAAGAQGAEVLDHLPQPGDFRDQVFVQSEKRRGGALPAVPSATPVPANPSGV
Ga0209577_10023117113300026552SoilQDCTTNQSLVGRVLGYGRVEVDAAGAQGAEVLDHLPKPGDFRDQVFVQSEKRRGGAVPPVPSATPVPANPSGV
Ga0209577_1031854133300026552SoilLGYGRVEVDAAGAQGAEILDHLPSPGDFRDQVFVQSEKRRGGVAPSTPSATPVPSNPSGI
Ga0208988_108088813300027633Forest SoilMLGYGRVEVDAAGAQGAEVLDHLPNPGAFRDQVFMQTERRRGGAPAVQPHPSGI
Ga0209074_1043440213300027787Agricultural SoilILGRMLGYGRVEVDAAGSQGAEILDHLPKPGDFRDQVFVLSEKRRGVAAAGMPAGAVTANPSGV
Ga0209580_1010450833300027842Surface SoilEVDAAGAQGAEVLQYLPKPGEFRDQVFVLSEKRRGGGTPSAPLTAPIPANPSGL
Ga0209701_1073087723300027862Vadose Zone SoilGRVEIDAAGAQGAEVLDHLPHPEEFRDQVFMQSERRRGGTPSSAPPTNPSGV
Ga0209283_1000575513300027875Vadose Zone SoilGAQGAEVLDYIAKPGQFRDQVFVQSEKRRGGGMPAAPAGAPMPANPSGV
Ga0209590_1047836133300027882Vadose Zone SoilEVDAAGAQGAEVLDHLPKPGEFRDQVFVQSERRRGGVGPAAPTPPPLAANPSGV
Ga0307504_1006398313300028792SoilGRMLGYGRVEVDAAGAQGAEVLDHLPNPGGFRDQVFMLSEKRRGIAASGAPAVPANPSGV
Ga0222749_1029018323300029636SoilMGRRLGYGRVEVDAAGAQGAEILNHLPNPGTFRDQVFMQSEKRRGGGASSAPSTMPANPSGI
Ga0307469_1120473713300031720Hardwood Forest SoilTRQSLLGRMIGYGRVEVDAAGAQGAEVLDHLPNPGDFRDQVFVQSEKRRGGAVATPSTAPVPADPSGV
Ga0307475_1023197213300031754Hardwood Forest SoilEIDAAGAQGAEVLNHLPNPGTFRDQVFMQSEKRRGGGTPAAPSAMPANPSGV
Ga0307473_1141959213300031820Hardwood Forest SoilDAAGAQGAEVLNPLPNPGQFRDQVFVQSERRRGGAASPAAPPANPSGV
Ga0307479_1081565033300031962Hardwood Forest SoilQDCSTRQTVFGRMIGYGRVEVDAAGAQGAEVLDHLPNPSVFRDQVFVLSEKRRGGTPAVPAAPTYPGGI
Ga0307471_10059017713300032180Hardwood Forest SoilVDAAGAQGAEVLQYLPKPGEFRDQVFVLSERRRGGGVSSAPSAAPMPANPSGL
Ga0306920_10039803913300032261SoilEIDAAGAQGAEVLQYLPKPGEFRDQVFLLSEKRRGGGIAAAPSGAQVPANPSGV

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.