NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F106158

Metagenome / Metatranscriptome Family F106158

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F106158
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 51 residues
Representative Sequence YRKLAEEYRRLADLAITAQEHTDLKLGDVSAQLDYLREQNESLQKILKEVE
Number of Associated Samples 73
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction Yes
3D model pTM-score0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(27.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 62.03%    β-sheet: 0.00%    Coil/Unstructured: 37.97%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.60
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00128Alpha-amylase 10.00
PF00005ABC_tran 6.00
PF06772LtrA 4.00
PF00106adh_short 2.00
PF13459Fer4_15 2.00
PF02880PGM_PMM_III 2.00
PF07969Amidohydro_3 2.00
PF00561Abhydrolase_1 1.00
PF04237YjbR 1.00
PF14525AraC_binding_2 1.00
PF08386Abhydrolase_4 1.00
PF01022HTH_5 1.00
PF00408PGM_PMM_IV 1.00
PF13560HTH_31 1.00
PF13671AAA_33 1.00
PF07929PRiA4_ORF3 1.00
PF02661Fic 1.00
PF00890FAD_binding_2 1.00
PF03176MMPL 1.00
PF04264YceI 1.00
PF01041DegT_DnrJ_EryC1 1.00
PF00196GerE 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG02961,4-alpha-glucan branching enzymeCarbohydrate transport and metabolism [G] 10.00
COG0366Glycosidase/amylase (phosphorylase)Carbohydrate transport and metabolism [G] 10.00
COG3280Maltooligosyltrehalose synthaseCarbohydrate transport and metabolism [G] 10.00
COG1523Pullulanase/glycogen debranching enzymeCarbohydrate transport and metabolism [G] 10.00
COG4292Low temperature requirement protein LtrA (function unknown)Function unknown [S] 4.00
COG1109PhosphomannomutaseCarbohydrate transport and metabolism [G] 3.00
COG0033Phosphoglucomutase/phosphomannomutaseCarbohydrate transport and metabolism [G] 3.00
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 1.00
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 1.00
COG1033Predicted exporter protein, RND superfamilyGeneral function prediction only [R] 1.00
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 1.00
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 1.00
COG2315Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR familyTranscription [K] 1.00
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 1.00
COG2409Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamilyGeneral function prediction only [R] 1.00
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 1.00
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 1.00


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil20.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil11.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.00%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil7.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil6.00%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa5.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.00%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil4.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.00%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil3.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil2.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.00%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil1.00%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.00%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.00%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.00%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.00%
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001403Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012EnvironmentalOpen in IMG/M
3300001454Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009826Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1Host-AssociatedOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300014052Permafrost microbial communities from Nunavut, Canada - A23_35cm_12MEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021439Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03EnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300023101Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14EnvironmentalOpen in IMG/M
3300025588Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027370Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027652Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027817Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028879Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3EnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030629Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE093SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20205J14842_101819123300001403Arctic Peat SoilDMAITAQEHTDLKLGDVSAQLDYLREQNESLQKILKEVE*
JGI20205J14842_102308913300001403Arctic Peat SoilADEYRRLADLAITAQEHTDLKLGEVSAQLDYLREQNESLQKILKEVE*
JGI20204J15135_101179633300001454Arctic Peat SoilDEYRRLADLAITAQEHTDLKLGEVSAQLDYLREQNESLQKILKEVE*
Ga0070714_10115223613300005435Agricultural SoilQLELAGGEQYRRLAEEYRRLSDLAITAQEHTDLKLGEVTAQLDHLQEQMASLQKILKDVE
Ga0070714_10163849523300005435Agricultural SoilLAEEYRRLADVAITAQEHTDLKLGDLSAQLDYLREQNESMQKILSEVE*
Ga0070710_1154064313300005437Corn, Switchgrass And Miscanthus RhizosphereQLAEEYRRLSDLAITVQEHVDLKLGELSAQLDHQREQMASMHKILKDVE*
Ga0070711_10005021243300005439Corn, Switchgrass And Miscanthus RhizosphereGTEQYRQLAEEYRRLADVAITAQEHTDLKLGDLSAQLDYLREQSESVQKILREVD*
Ga0070711_10011968433300005439Corn, Switchgrass And Miscanthus RhizosphereTGTEQYRQLTDEYRRLADLAITAQEHTDLKLGDLSAQLDYLREQNESLQKILKEVE*
Ga0070681_1110978723300005458Corn RhizosphereEEYRRLADVAITAQEHTDLKLGDLSAQLDYLRDQSDSMQKILREVE*
Ga0070730_10007197123300005537Surface SoilMTGGEQYRLLAEEYRRLSDLAVTAQEHSDLKLGEVTAQLDHMQAQMDSLQRILKEVE*
Ga0070731_1087492523300005538Surface SoilAQIELTGGEQYRKLAEEYRRLADMAITAQEHTDIKLSDVSAQLDYLREQNASLHKILKEVE*
Ga0070761_1068531713300005591SoilYRGLADEYRRLSDLAITAQEHTDLKLGDVGVQLDYLREQMESLQKILKEVE*
Ga0070761_1103518523300005591SoilTGGEQYRKLAEEYRRLADLAITAQEHTDLKLGDVSAQLDYVREQNESLQKILREVE*
Ga0070764_1052018013300005712SoilADEYRRLSDLAITAQEHTDLKLGDVGVQLDYLREQMESLQKILKEVE*
Ga0070764_1084042913300005712SoilRRLADLAITAQEHTDLKLGDVSAQLDYVREQNESLQKILREVE*
Ga0070766_1074585813300005921SoilADLAITAQEHTDLKLGDVSAQLDYLREQNESLQKILKEVE*
Ga0070717_1156552613300006028Corn, Switchgrass And Miscanthus RhizosphereLADVAITAQEHTDLKLGDLSAQLDYLRDQSDSMQKILKEVD*
Ga0070717_1170876213300006028Corn, Switchgrass And Miscanthus RhizosphereADEYRRLADVAITAQEHTDLKLGDLSAQLDYLREQNDSMQKILSEVE*
Ga0079221_1015008313300006804Agricultural SoilARKRVQLELTGTEQYRRLAEEYRRLADVAITAQEHTDLKLGDLSAQLDYLRDQSDSMQKILKEVE*
Ga0079221_1134011413300006804Agricultural SoilRLADTAITTQEHTDLKLGDVSAQLDHLREQMASLQKILKDVE*
Ga0116222_126511823300009521Peatlands SoilYRKLAEEYRRLADLAITAQEHTDLKLGDVSAQLDYLREQNESLQKILKEVE*
Ga0116220_1039940723300009525Peatlands SoilVTLVVHTDLKLGDLGAQLDYLREQNESLQKILKEVE*
Ga0105237_1249526513300009545Corn RhizosphereAQVELTVGEQYRQLAEEYRRLSDTAITSQEHTDLKLGDVSAQLDHLREQIASLQKILKDVE*
Ga0105238_1276458713300009551Corn RhizosphereTEQYRQLTDEYRRLADLAITAQEHADLKLGDLSVQLDYLREQNESLQKILKEVE*
Ga0116224_1020771223300009683Peatlands SoilQYRKLAEEYRRLADLAITAQEHTDLKLGDVSAQLDYLREQNESLQKILKEVE*
Ga0123355_1174650413300009826Termite GutLAEEYRRLADIAITAQEHTDLKLADVSVQLDFLRQQNESLQKILREVE*
Ga0126378_1122318813300010361Tropical Forest SoilRLADLAITAQEHTDLKLGDMSVRIDHLMDQMASLQTILKEVE*
Ga0126377_1303923313300010362Tropical Forest SoilEEYRRLADVAITAQEHTDLKLGDLSAQLDYLRDQSDSMQKILKEVE*
Ga0136449_10223141623300010379Peatlands SoilAITAQEHTDLKLGDVSAQLDYLREQNESLQKILKEVE*
Ga0136449_10456238823300010379Peatlands SoilVTSSDTYRKLADEYRRLAEMAITAQEHTDLKLGDLGIRLEQVRDQLDSVQRILKDVE*
Ga0134121_1146880323300010401Terrestrial SoilQLTDEYRRLADLAITAQEHNDLKLGDLSVQLDYLREQNESLQKILKEVE*
Ga0126350_1126192213300010880Boreal Forest SoilQAELAGGEQYRALAEEYRRLADLAITAQEHTDLKLGEVTAQLDHLRDQSDSLQKILKEVE
Ga0126350_1203142623300010880Boreal Forest SoilAGGEQYRALAEEYRRLADLAITAQEHTDLKLGEVTAQLDHLREQSDSLQKILKEVE*
Ga0126350_1242046513300010880Boreal Forest SoilMAITAQEHTDLKLGDVSAQLDYLREQNESLQKILKEVE*
Ga0137379_1125530123300012209Vadose Zone SoilMAITAREHTDLKLGDVSAQLDYLREQNESLQKILKEVE*
Ga0137378_1025456223300012210Vadose Zone SoilMAITSQEHTDLKLGDLSAQLDYLREQNDSLQKILKEVE*
Ga0157370_1122246613300013104Corn RhizosphereLTGTEQYRQLTDEYRRLADLAITAQEHNDLKLGDLSVQLDYLREQNESLQKILKEVE*
Ga0120109_103190213300014052PermafrostDYRCLAEEYRRLAEMAITAQEHTDLKLGDVTMQIGQVREQMESVQRILKDVE*
Ga0182024_1061743733300014501PermafrostLAITAQEHTDLKLGEVSAQLDYLREQNESLQKILKEVE*
Ga0187808_1045905913300017942Freshwater SedimentITAQEHTDLKLGQINAQLDYLREQTESLQKILKEVE
Ga0187783_1018686413300017970Tropical PeatlandEQYRQMADEYRRLADLAITAQEHTDLKLGDVGVQLDYLREKIESLQKILEDVE
Ga0187805_1044276513300018007Freshwater SedimentITAQEHTDLKLGDVSAQLDYLREQNASLQKILKDVE
Ga0187805_1048711313300018007Freshwater SedimentSGEEYRRLAEEYRRLADMAITAQEHTDLKLGDVSVRIDYLREQMESLQKILSEVE
Ga0210395_1064699113300020582SoilQLTGGERYRALAEEYRRLSDLAITSQEHTDLKMGEISAQLDHLRSQIDSLQKILRDVE
Ga0210395_1133173823300020582SoilLADEYRRLADMAITAQEHTDLKLGDVSAQLDYLREQNASLQKILKEVE
Ga0210400_1154171313300021170SoilLAGSEQYRALAEEYRRLSDLAITAQEHTDLKMGEVSAQLDYLRAQVDSLQKILRDVE
Ga0210385_1104629923300021402SoilLAEEYRRLADMAITAQEHTDLKLGDVSAQLDYLREQNESLQKILKDVE
Ga0210397_1021848013300021403SoilALTTQEHTDLRLGDISARLDHLREQMASLQRILKDVE
Ga0210389_1021974613300021404SoilMAITSQEHTDLKLGDVSAQLDHLREQMASLQKILKDVE
Ga0210389_1050175433300021404SoilRLTSDEQYRALAEEYRRLSDLAITAQEHTDLKMGEVSAQLDHLRAQIGSLQKILRDVE
Ga0210386_1140719623300021406SoilTSQEHTDLKLGDVSAQLDHLREQMASLQKILKDVE
Ga0213879_1027855913300021439Bulk SoilKADVTSGEQYRQLTDEYRRFADMAITAQEHADLKLGDVSVQIDYLRDQMESLQKILKEVE
Ga0210398_1135156813300021477SoilARAFGARRSAKAELTSGEKYRGLADEYRRLADLAVTAQEHTDLKLGDVGVQLDYMREQMESMQKILKEVE
Ga0224557_112176133300023101SoilLADLAITAQEHTDLKLGELSAQLDYVREQNDSLQKILKEVE
Ga0208586_112782813300025588Arctic Peat SoilRRLADLAITAQEHTDLKLGEVSAQLDYLREQNESLQKILKEVE
Ga0207692_1018973913300025898Corn, Switchgrass And Miscanthus RhizosphereEQYRQLTDEYRRLADLAITAQEHTDLKLGDLSAQLDYLREQNESLQKILKEVE
Ga0207692_1109135923300025898Corn, Switchgrass And Miscanthus RhizosphereELTSGEQYHQLAEEYRRLSDLAITVQEHVDLKLGELSAQLDHQREQMASMHKILKDVE
Ga0207654_1054592423300025911Corn RhizosphereDEYRRLADVAITAQEHTDLKLGDLSAQLDYLRDQSDSMQKILSEVE
Ga0207663_1096638023300025916Corn, Switchgrass And Miscanthus RhizosphereLTSGEQYHQLAEEYRRLSDLAITVQEHVDLKLGELSAQLDHQREQMASMHKILKDVE
Ga0207676_1242188223300026095Switchgrass RhizosphereVAITAQEHTDLKLGDLSAQLDYLREQNDSMQKILSEVE
Ga0209010_104234823300027370Forest SoilRLADLAITAQEHTDLKLADVGVQLDYLREKIESMQKILEDVE
Ga0209007_107038823300027652Forest SoilKLTSGEQYRRLADEYRRLADLAITAQEHTDLKLGDVGVQLDYLREKIESMQKILEDVE
Ga0209073_1002261433300027765Agricultural SoilTGTEQYRQLADEYRRLADVAITAQEHTDLKLGDLSAQLDYLREQNDSMQKILSEVE
Ga0209074_1033661623300027787Agricultural SoilLADVAITAQEHTDLKLGDLSAQLDYLREQNDSMQKILSEVE
Ga0209112_1001315943300027817Forest SoilRKVQAELSGGQQYRALSEEYRRLADLAITAQEHTDLKLGEVTAQLDHLREQSDSLQKILKEVE
Ga0209112_1032176413300027817Forest SoilAQVELTGGQQYRQLAEEYRRLADLAITAQEHTDIKLGDVSAQLDYLREQNDSLQKILKDV
Ga0209693_1044517613300027855SoilGEQYRQLAEEYRRLSDMAITAQEHADLKLGDVSAQLDHLREQMASLQKILKDVE
Ga0209166_1003298523300027857Surface SoilMTGGEQYRLLAEEYRRLSDLAVTAQEHSDLKLGEVTAQLDHMQAQMDSLQRILKEVE
Ga0302229_1050957913300028879PalsaQYRQLAEEYRRLADMAITTQEHTDMKLGDVTVQLDHLREQTASLQKILKDVE
Ga0311372_1014874863300030520PalsaRAQIELGGGEQYRQLAEEYRRLSDLAITAQEHTDLKLGEVSAQLDYLREQMASLQKILKDVE
Ga0210268_130572623300030629SoilAFGDRRNAEAELTSGEEYRRLADEYRRLADMAITAQEHTDLKLGDVSVRIDYLREQMESLQKILKEVE
Ga0310038_1007715713300030707Peatlands SoilLADLAITAQEHTDLKLGDVSAQLDYLREQNESLQKILKEVE
Ga0302325_1312660013300031234PalsaLAVKKRAQIELGGGEQYRQLAEEYRRLSDLAITAQEHTDLKLGEVSAQLDYLREQMASLQKILKDVE
Ga0302324_10132254023300031236PalsaARKRAQAELTGGEQYRQLAEEYRRLADMAITTQEHTDMKLGDVTVQLDHLREQTASLQKILKDVE
Ga0302326_1129571623300031525PalsaEEYRRLADMAITTQEHTDMKLGDVTVQLDHLREQTASLQKILKDVE
Ga0307478_1063500423300031823Hardwood Forest SoilAAGFGIAAWARAFAARAKARADVADGEQYRQLTDEYRRFADMAITAQEHADLKLGDVSVRIDYLRDQMESLQKILKEVE
Ga0318549_1043740213300032041SoilYRKLADEYRRMADMMITSQEHIDLKLGEFSAQLDHLREQNESLHKILKDVE
Ga0308173_1096651523300032074SoilDVAITAQEHTDLKLGDLSAQLDYLREQNDSMQKILSEVE
Ga0311301_1097446913300032160Peatlands SoilAQIELTGGEQYRKLAEEYRRLADLAITAQEHTDLKLGDVSAQLDYLREQNESLQKILKEV
Ga0307471_10268231013300032180Hardwood Forest SoilQYRQLTDEYRRLADLAITAQEHADLKLGDLSVQLDYLREQNESLQKILKEVE
Ga0335078_1012456513300032805SoilRLADLAITAQEHTDLKLGDVSAQLDYLREQNESLQKILKDVE
Ga0335078_1041708833300032805SoilYRRLAEEYRRLADLAITAQEHTDLKLGDVSAQLDFLREQNESLQKILKDVE
Ga0335069_1152268313300032893SoilRKQAQLELTGTEQYRQLADEYRRLADLAITAQEHTDLKLGDLSAQLDYLREQNESLQKILREVE
Ga0335074_1020546043300032895SoilLAITAQEHTDLKLGDVSAQLDFVREQNESLQKILKEVE
Ga0335074_1055442813300032895SoilGEQYRGLADEYRRLSDLAITAQEHTDLKLGDVGVQLDYLREQMESMQKILKEVE
Ga0335074_1102420513300032895SoilDQYRRLAEEYRRLADLAITAQEHTDLKLGDVSAQLDYLREQNASLQKILKDVE
Ga0335074_1125221013300032895SoilRQSRHQITGGEQYRALAEEYRRLSDLAITAQEHTDLKMGEISVQLDYLRSQNESLQKILRDVE
Ga0335075_1007031663300032896SoilLAEEYRRLADIAITSQEHTDLKLGDLSAQLDYVREQNESLQKILKEVE
Ga0335075_1052905713300032896SoilLAITAQEHTDLKLGDVSAQLDFLREQNESLQKILKEVE
Ga0335075_1093038913300032896SoilDEYRRLVDMAITAQEHTDLKLGDVSAQLDHLREQNDSLQKILKDVE
Ga0335075_1122777823300032896SoilELTSGENYRKLADEYRRLTDMAITAQEHTDLKLGDVSARLDHLREQNASLQKILSDVE
Ga0335075_1141155813300032896SoilTAQEHTDLKLGDVNAQLEYLREQNESLQKILKEVE
Ga0335072_1063386333300032898SoilKRTQLELTGSEQYRRLAEEYRRLADLAITAQEHTDLKLGDVSAQLDYLREQNASLQKILKDVE
Ga0335072_1144853813300032898SoilAITAQEHTDLKLGDVSAQLDFVREQNESLQKILKEVE
Ga0335072_1182627623300032898SoilQAQVELTGGQQYRQLAEEYRRLADLAITAQEHTDIKLGDVSAQLDYLREQNDSLQKILKDVE
Ga0335083_1082063613300032954SoilRQLTDEYRRLADLAITAHEHTDLKLGDLSAQLDYLREQNESLQKILKEVE
Ga0335073_1016409513300033134SoilLTTRKQAQLELTGSEQYRRLAEEYRRLADLAITAQEHTDLKLGDVSAQLDYLREQNASLQKILKDVE
Ga0335073_1029231013300033134SoilAKSRAELTSGEQYRQLTDEYRRFADMAITAQEHTDLKLGDVSVRIDYLRDQMESLQKILKEVE
Ga0335073_1155016233300033134SoilTVVKRVQLERSGDEEFRRLAEEYRRLADLAITAQEHTDLKLLDVSTQLDFLREQNASLQKILSEVE
Ga0335077_1038920713300033158SoilYRRLADVAITAQEHTDLKLGDVSAQLDYLREQNESLQKILKDVE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.