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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F106130 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 100 |
| Average Sequence Length | 71 residues |
| Representative Sequence | VQNEPNDPVSGEAAATPTSQTVDVTGSSAATPTNGFRAFVRRRELVIFFVLSYLIAWSTLPFGSF |
| Number of Associated Samples | 81 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 100.00 % |
| % of genes near scaffold ends (potentially truncated) | 1.00 % |
| % of genes from short scaffolds (< 2000 bps) | 1.00 % |
| Associated GOLD sequencing projects | 78 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.32 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (100.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (35.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (38.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (51.000 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 25.81% β-sheet: 0.00% Coil/Unstructured: 74.19% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.32 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF03551 | PadR | 4.00 |
| PF07730 | HisKA_3 | 3.00 |
| PF02517 | Rce1-like | 3.00 |
| PF00196 | GerE | 2.00 |
| PF00474 | SSF | 2.00 |
| PF00072 | Response_reg | 1.00 |
| PF00005 | ABC_tran | 1.00 |
| PF02567 | PhzC-PhzF | 1.00 |
| PF01663 | Phosphodiest | 1.00 |
| PF11774 | Lsr2 | 1.00 |
| PF16927 | HisKA_7TM | 1.00 |
| PF11716 | MDMPI_N | 1.00 |
| COG ID | Name | Functional Category | % Frequency in 100 Family Scaffolds |
|---|---|---|---|
| COG1695 | DNA-binding transcriptional regulator, PadR family | Transcription [K] | 4.00 |
| COG1733 | DNA-binding transcriptional regulator, HxlR family | Transcription [K] | 4.00 |
| COG1846 | DNA-binding transcriptional regulator, MarR family | Transcription [K] | 4.00 |
| COG1266 | Membrane protease YdiL, CAAX protease family | Posttranslational modification, protein turnover, chaperones [O] | 3.00 |
| COG3850 | Signal transduction histidine kinase NarQ, nitrate/nitrite-specific | Signal transduction mechanisms [T] | 3.00 |
| COG3851 | Signal transduction histidine kinase UhpB, glucose-6-phosphate specific | Signal transduction mechanisms [T] | 3.00 |
| COG4449 | Predicted protease, Abi (CAAX) family | General function prediction only [R] | 3.00 |
| COG4564 | Signal transduction histidine kinase | Signal transduction mechanisms [T] | 3.00 |
| COG4585 | Signal transduction histidine kinase ComP | Signal transduction mechanisms [T] | 3.00 |
| COG0384 | Predicted epimerase YddE/YHI9, PhzF superfamily | General function prediction only [R] | 1.00 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 100.00 % |
| Visualization |
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| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300010147|Ga0126319_1042519 | Not Available | 875 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 35.00% |
| Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 9.00% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 9.00% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 4.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 4.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 3.00% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 2.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.00% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 2.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.00% |
| Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 2.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 2.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.00% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 2.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 2.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.00% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 1.00% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 1.00% |
| Sugarcane Root And Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil | 1.00% |
| Soil | Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil | 1.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.00% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 1.00% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 1.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 1.00% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 1.00% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000363 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300000709 | Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA F1.4 TB amended with BrdU and acetate no abondance | Environmental | Open in IMG/M |
| 3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
| 3300001431 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly | Environmental | Open in IMG/M |
| 3300003324 | Sugarcane bulk soil Sample H2 | Environmental | Open in IMG/M |
| 3300003911 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
| 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
| 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
| 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
| 3300006903 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5 | Host-Associated | Open in IMG/M |
| 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009789 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28 | Environmental | Open in IMG/M |
| 3300010036 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26 | Environmental | Open in IMG/M |
| 3300010041 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A | Environmental | Open in IMG/M |
| 3300010044 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60 | Environmental | Open in IMG/M |
| 3300010045 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61 | Environmental | Open in IMG/M |
| 3300010147 | Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010166 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27 | Environmental | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012477 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610 | Host-Associated | Open in IMG/M |
| 3300012488 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610 | Host-Associated | Open in IMG/M |
| 3300012507 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610 | Host-Associated | Open in IMG/M |
| 3300012884 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 | Environmental | Open in IMG/M |
| 3300012897 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1 | Environmental | Open in IMG/M |
| 3300012904 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1 | Environmental | Open in IMG/M |
| 3300012908 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1 | Environmental | Open in IMG/M |
| 3300012911 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2 | Environmental | Open in IMG/M |
| 3300012938 | Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015 | Environmental | Open in IMG/M |
| 3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
| 3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
| 3300018031 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1 | Environmental | Open in IMG/M |
| 3300018051 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1 | Environmental | Open in IMG/M |
| 3300018066 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1 | Environmental | Open in IMG/M |
| 3300018081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1 | Environmental | Open in IMG/M |
| 3300019869 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2 | Environmental | Open in IMG/M |
| 3300019875 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2 | Environmental | Open in IMG/M |
| 3300021078 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo | Environmental | Open in IMG/M |
| 3300021510 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex | Environmental | Open in IMG/M |
| 3300022889 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4 | Environmental | Open in IMG/M |
| 3300022915 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4 | Environmental | Open in IMG/M |
| 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028704 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379 | Environmental | Open in IMG/M |
| 3300028708 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152 | Environmental | Open in IMG/M |
| 3300028721 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355 | Environmental | Open in IMG/M |
| 3300028722 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368 | Environmental | Open in IMG/M |
| 3300028744 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367 | Environmental | Open in IMG/M |
| 3300028754 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157 | Environmental | Open in IMG/M |
| 3300028768 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119 | Environmental | Open in IMG/M |
| 3300028771 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369 | Environmental | Open in IMG/M |
| 3300028778 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142 | Environmental | Open in IMG/M |
| 3300028784 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121 | Environmental | Open in IMG/M |
| 3300028787 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381 | Environmental | Open in IMG/M |
| 3300028790 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122 | Environmental | Open in IMG/M |
| 3300028793 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159 | Environmental | Open in IMG/M |
| 3300028811 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149 | Environmental | Open in IMG/M |
| 3300028814 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183 | Environmental | Open in IMG/M |
| 3300028876 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140 | Environmental | Open in IMG/M |
| 3300028884 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195 | Environmental | Open in IMG/M |
| 3300028885 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185 | Environmental | Open in IMG/M |
| 3300031082 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031114 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Host-Associated | Open in IMG/M |
| 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Host-Associated | Open in IMG/M |
| 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Host-Associated | Open in IMG/M |
| 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Host-Associated | Open in IMG/M |
| 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Host-Associated | Open in IMG/M |
| 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Host-Associated | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| ICChiseqgaiiFebDRAFT_136955552 | 3300000363 | Soil | MNTRTVQNEPNDPAAGEPSGTPTMDSVATQSSATIPSNGFRAFVRRRELVIFFALSYLIAWSTIPWGSFLAFSPL |
| KanNP_Total_F14TBDRAFT_10077271 | 3300000709 | Soil | MKTRIEQNEPNDPASGEAFGMPTFQTVDMNGKSATAPVNGFRAFVRRRELVIFFVMSYLIAWSTVPFGTFIAFSPLVSAIVVVLIAEGLPGLAR |
| JGI10216J12902_1001708392 | 3300000956 | Soil | MKTRIVQNDPNDPALGEGSGTPRTQTVDAGNSATAPTNGFRAFVRRRELVIFFVLCYLIGWSALPWGSFIAFAPLISAIVVVSIAEGLP |
| JGI10216J12902_1077395452 | 3300000956 | Soil | MKTRIVQNEPNDPVAGETPLTPTNPAPDSPESLATTPTNGFRAFVRRRELVIFFALSYLIAWSGLPFGSFL |
| F14TB_1001788092 | 3300001431 | Soil | MKTRIEQNEPNDPASGEAFGMPTFQTVDMNGKSATAPVNGFRAFVRRRELVIFFVMSYLIAWSTVPFGTFIAFSPLVSAIVV |
| soilH2_100747412 | 3300003324 | Sugarcane Root And Bulk Soil | MKTRIVQNEPSDPIPGEASVLDVSPTVGMSEHSVAAPTNGFRAFVRRRELVIFFVLCYLIGWSKAICPS* |
| JGI25405J52794_101408022 | 3300003911 | Tabebuia Heterophylla Rhizosphere | MKTRIVQNEPNDPIPGEASASGVSPTVDMSEHSVAAPTNAFRAFVRRRELVIFFVLCYLIGWSALPWGTFNAFAPLIS |
| Ga0062593_1012811301 | 3300004114 | Soil | MKTRIVQNEPNDPVAGETPLTPTNPAPDSPESLATTPTNGFRAFVRRRELVIFFALSYLIAWSGLPFGSFLAFAPIVSAIVVVT |
| Ga0063356_1040417321 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MKTRIVQNEPNDPAPGKASVAPKGQSVDTTGSSATTPTNGFRTFVRRRELVIFFVLTYLIAWSTVPF |
| Ga0062595_1017927612 | 3300004479 | Soil | MKTRIVQNEPNDPAPGKASVAPKGQSVDTTGSSATTPTNGFRTFVRRRELVIFF |
| Ga0068868_1008196622 | 3300005338 | Miscanthus Rhizosphere | MKTRIVQSEPNDPTSGHTSVTPTRQTADVTGSSAAPPTNGFRTFVRRRELVIFFALTYLIAWSTLPFGSFLA |
| Ga0068868_1013703792 | 3300005338 | Miscanthus Rhizosphere | VQNEPNDPVSGEAAVTPTSQTGDVRGSPAAIPTNGFRAFVRRRELVIFFVLSYLIAWSTLPFGGFLAFAPLVSAIVVVLIAEGLPGLAR |
| Ga0070700_1001055161 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MKTRIVQSEPNDPTSGHTSVTPTRQTADVTGSSAAPPTNGFRTFVRRRELVIFFALTY |
| Ga0068852_1010967491 | 3300005616 | Corn Rhizosphere | MKTRIVQSEPNDPTSGHTSVTPTRQTADVTGSSAAPPTNGFRTFVRRRELVIFFALTYLIAWST |
| Ga0081455_110507322 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MERYDHNIGCPTNLTEELGMKTRIVQNEPNDPAPREASVTRASQTADDTEGPGIVPPNGFRAFVRRRELVIFFALSYLIAWSTVPFGSFLAFSPLV |
| Ga0075426_102442082 | 3300006903 | Populus Rhizosphere | MKTRIVQNEPNDPVSGEAAGRLRGQTADVTGSSATTSTNGFRAFVRRRELVIFFVLSYLIAWS |
| Ga0105240_113949371 | 3300009093 | Corn Rhizosphere | MKTRIVQSEPNDPTSGHTSVTPTRQTADVTGSSAAPPTNGFRTFVRRRELVIF |
| Ga0105240_115215351 | 3300009093 | Corn Rhizosphere | MKTRIVQNEPNDPVSGGAAVTPADQATDITGSSATTPTNGFRAFVRRRELVIFFVLSYLIAWSTLPFGSFLAFAPIVSAV |
| Ga0105245_105191353 | 3300009098 | Miscanthus Rhizosphere | MKTRIVQNEPNDPAPGKASVAPKGQSVDTTGSSATTPTNGFRTFVRRRELVIFFAL |
| Ga0105245_112157482 | 3300009098 | Miscanthus Rhizosphere | VQNEPNDPVSGEAAVTPTSQTGDVRGSPAAIPTNGFRAFVRRRELVIFFVLSYLIAWSTLPFGGFLAFAPLVSAIVVVLIGEGLPGLARLGRRVIKWRVNW |
| Ga0111538_125984481 | 3300009156 | Populus Rhizosphere | MKTRIVQNEPNDPISGEASAPSVSSTVDRSRRSSPVPKNAFRAFVRRRELVIFFVLSYLIAWSGTPFGCFYAFSPLISAIVVVSIAEG |
| Ga0126307_100226601 | 3300009789 | Serpentine Soil | VQNKPNDPVSGGAAVTPTSQTGDVRGSSAATPTNGFRAFVRRRELVIFFVLS |
| Ga0126305_104014561 | 3300010036 | Serpentine Soil | MKTRIVQNEPNDPTSEGASGTPTVQNVEVTGSSATAPTNGFRAFVRRRELVIFFAISYLIAWSTLPWGSFLAFSPLLSAIIVVAVAEGWRGLAQ |
| Ga0126305_105126591 | 3300010036 | Serpentine Soil | MTTPGAGIVQNEPNDPVSGEAAVTPTSQAGDVTGSSAATPTNGFRAFVRRRELVIFFVLSYLIAWST |
| Ga0126312_107519241 | 3300010041 | Serpentine Soil | MKTRIVQNEPNDPASGEASETPTIQAVEVSRGFVTTPTNGFRAFVRRRELVIFFALSYLIAWSTVPFGMFLAFSPLVSAIVVVLIAEGLP |
| Ga0126310_101447582 | 3300010044 | Serpentine Soil | MQSARGAGIVQNEPNDPVSGEAVATPTSQTVDMTGSSGATPTNGFRAFVRRRELVIFFVLSYLIAWSTLPFGSFLAFAPLVSAIGVVAIGEGWPGLARLGRISFPPALLSDSAC* |
| Ga0126310_114111751 | 3300010044 | Serpentine Soil | MTTPGAGIVQNEPNDPVSGEAAVTPTSQAGDVTGSSAATPTNGFRAFVRRRELVIFFVLSYLIAWSTLPF |
| Ga0126311_107290411 | 3300010045 | Serpentine Soil | VQNEPNDPVSGEAAGTPPSQTVKVTGSSTATPTNGFRAFVRRRELVIFFVLSYLIAWSTLPFGGFLAFAPLVSAIVVVLIAEGLPG |
| Ga0126311_112741711 | 3300010045 | Serpentine Soil | MLSARGAGIVQNEPNDPVSVEAAGTPTSQTGDVRGSSAATPTNGFRAFVRRRELVIFF |
| Ga0126319_10425191 | 3300010147 | Soil | MKTRIVQNEPNDPAPGEPSVTPTMRSVEVRGRSATTPTNGFRAFVRRRELVIFFALSYLIAWSTLPFGTFLAFAPL |
| Ga0126306_106291351 | 3300010166 | Serpentine Soil | VQYEPNDPVSGEAAVTPTSQSADVTGSSTATPTNGFRTFVRRRELVIFFVLSYLIAWSTLPFGGFLAFG |
| Ga0150985_1202420511 | 3300012212 | Avena Fatua Rhizosphere | MKTRIVQNEPNDPGSGEVSITPQSQSSDAAASRAAPTNGFRAFVRRRELVIFFVLSYL |
| Ga0157336_10091851 | 3300012477 | Arabidopsis Rhizosphere | MAIRPQGADMKTRIVQNEPNDPAPGEASVAPTGQSVDTRGSSATPPTNGFRAFVRRRELVIFFVLCYLIGWSALPWGSFLAFAPLISAIVVV |
| Ga0157336_10184291 | 3300012477 | Arabidopsis Rhizosphere | MKTRIVQNEPNDPAPGEPSVTPTMRSVEVRRSSATTPTNGFRAFVRRRELVIFFALSYLIAWSTLPFGTFLAFAPLLSA |
| Ga0157343_10113271 | 3300012488 | Arabidopsis Rhizosphere | MKTRIVQNEPNDPAPGEASVAPTGQSVDTRGSSATPPTNGFRAFVRRRELVIFFVLCYLIGWSALPWGSFLAFAPLISAIVVVSIAEGLPGLARLGRRVIR |
| Ga0157342_10199351 | 3300012507 | Arabidopsis Rhizosphere | MKTRIVQNEPNDPAPGEASVAPTGQSVDTRGSSATPPTNGFRAFVRRRELVIFFVLCYLIGWSALPWGSFLAFAPLISAIV |
| Ga0157300_10869071 | 3300012884 | Soil | MKTRIEQNEPNDPVSGEASGTPTIQTVEVNANSATAPTNGFRAFVRRRELVVFFVLSYVIAWSTLPVGTFIAFSPLVSAIVVVLI |
| Ga0157285_101481162 | 3300012897 | Soil | MKTRIVQNEPNDPAPGETSIAPKGQSVDTTGSSATTPTNGFRTFVRRRELVIFFAL |
| Ga0157282_101597671 | 3300012904 | Soil | MKTRIEQNEPNDPVSGEASGTPTIQTVEVNANSATAATNGFRAFVRRRELVVFFVLSYVIAWSTLPVGTFIAFSPLVS |
| Ga0157286_104524392 | 3300012908 | Soil | LQNEPNDPVSGEAAATPTSQTIKVTGSSAATPTNGFRAFVRRRELVIFFVLSY |
| Ga0157301_100204742 | 3300012911 | Soil | MKTRIEQNEPNDPAYGEASGTPTSQTVEVDGNSATAPTSGFRAFVRRRELVIFFVLS |
| Ga0162651_1000261032 | 3300012938 | Soil | MKTRIVQNEPNDPVSGEAAATPTSQTIKVTGSSAATPTNGFRAFVRRRELVIF |
| Ga0164300_105589213 | 3300012951 | Soil | MKTRIVQNEPNDPVSGQASVTPTRQTADVTTNSATPANGFRTFVRRRELVIFFALTYLIA |
| Ga0164307_111131641 | 3300012987 | Soil | MKTRIVQNEPNDPAPGKASVAPKGQSVDTTGSSATTPTNGFRTFVRRRELVIFFALTYLIAWSTVPFGSFLAFSPL |
| Ga0163162_110172581 | 3300013306 | Switchgrass Rhizosphere | MKTRIVQNEPSDPVSGGAAVTPPGQATDMTGSSATTSTNGFRAFVRRRELVIFFVLSY |
| Ga0182008_109114472 | 3300014497 | Rhizosphere | MKTRIEQNEPNDPASGEASGTPTIQTVEVNGNSATAPTNGFRAFVRRRELVSFFVLSYLIAWSTLPFGTFGAYAPLISAI |
| Ga0132257_1037227411 | 3300015373 | Arabidopsis Rhizosphere | MKTRIVQNEPNDPASGEGSASTSQVDLAASPAMTTPTNGFRAFVRRRELVIFF |
| Ga0163161_105005451 | 3300017792 | Switchgrass Rhizosphere | MKTRILQNEPNDPVSGEAAGRLRGQTADVTGSSATTSTNGFRAFVRRRELVIFFVLSYLIAWSTVPF |
| Ga0184634_104691762 | 3300018031 | Groundwater Sediment | MKTRIVQNDPNDPGSGEASITPQSQSPDAAASRAAPTNGFRAFVRRRELVIFFVLSYLIAWSPLPFG |
| Ga0184620_100893771 | 3300018051 | Groundwater Sediment | MKTRIVQSEPNDPTSGQASVTPTRQTADVTRSSAAPPTNGFRTFVRRRELVIFFALTYLIAWSTLPFGSFLAFSPL |
| Ga0184617_11374971 | 3300018066 | Groundwater Sediment | MKTRIEQNEPNDPISAEASGTPTIQTVEVNGNSATAPTNGFRAFVRRRELVIFFALTYLIAWSTLPFGTFL |
| Ga0184625_103656032 | 3300018081 | Groundwater Sediment | MKTRIVQNEPNDPGSGEASITPQSQSPDAAASRAAPTNGFRAFVRRRELVIFFVLSYLIAWS |
| Ga0193705_10383811 | 3300019869 | Soil | METRMVQNEPNDPASGEPSVTPTVGSAEVTRSSATIPTNGFRAFVRRRELVIFFVLAYAIAWSPLPFGTF |
| Ga0193701_10130832 | 3300019875 | Soil | MKTRIVQNEPNDPVSGQASVTPRRQTDDMTGSSAATPANGFRAFVRRRELVIFFALTYLIAWSTLPFGSFLAFSPLVSAIIV |
| Ga0210381_100925332 | 3300021078 | Groundwater Sediment | VQNEPNDPVSREAAATPTSQTVDVTGSSAATPTNGFRAFVRRRELVIFFVLSYLIAWSTLPFGSF |
| Ga0222621_10270681 | 3300021510 | Groundwater Sediment | MKTRIVQNEPNDPGSGEASITPQSQSPDAAASRAAPTNGFRAFVRRRELVIFFVLSYLIAWSPLPFGTFGAFSPIISAIIVVLIAEGL |
| Ga0222621_10317243 | 3300021510 | Groundwater Sediment | VQNEPNDPVSGEAAATPTSQTVKVTGSSAATPTNGFRAFVRRRELVIFFVLSYLIAWSTLPFGSFLPFAPIVSAIVVVAIAEGL |
| Ga0247785_10387441 | 3300022889 | Soil | MKTRIEQNEPNDPVSGEASGTPTIQTVEVNANSATAPTNGFRAFVRRRELVVFFVLSYVIAWSTLPVGTFIAFSPLVSAIVVVLIAEGLPGLARLGRRVI |
| Ga0247790_100164902 | 3300022915 | Soil | MKTRIEQNEPNDPASGEASGTPTIETAEVNGNSMTAPTNGFRAFVRRRELVIFFVLCYLI |
| Ga0207688_104062901 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | MKTRIVQNEPNDPVSGEAAGRLRGQTADVTGSSATTSTNGFRAFVRRRELVIFFVLSYLIAWSTVPFGSFL |
| Ga0207681_102753591 | 3300025923 | Switchgrass Rhizosphere | MKTRIVQSEPNDPTSGHTSVTPTRQTADVTGSSAAPPTNGFRTFVRRRELVIFFALTYLIAWSTLPFGSFL |
| Ga0207668_111038252 | 3300025972 | Switchgrass Rhizosphere | MKTRIVQNEPNDPVQAEPSATPAGQANDIPGSSATTPINGFRAFVRRRELVIFFVLSYLIAWSTLPFGSFLAFAPIL |
| Ga0207708_100671891 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | MKTRIVQSEPNDPTSGHTSVTPTRQTADVTGSSAAPPTNGFRTFVRRRELVIFFALTYLIAWSTL |
| Ga0207698_106483911 | 3300026142 | Corn Rhizosphere | MKTRIVQNEPSDPVSGGAAVTPPGQATDITGSSATTSTNGFRAFVRRRELVIFFVLS |
| Ga0207698_110311871 | 3300026142 | Corn Rhizosphere | MKTRIVQSEPNDPTSGHTSVTPTRQTADVTGSSAAPPTNGFRTFVRRRELVIFFALTYLIAWSTLPFGS |
| Ga0307321_10518672 | 3300028704 | Soil | METRMVQNEPNDPASGEPSVTPTVGSAEVTRSSATIPTNGFRAFVRRRELVIFFVLAYAIAWSPLPFGTFGAFSPIISAIIVVL |
| Ga0307295_100657473 | 3300028708 | Soil | VQNEPNDPVSGEAAATPTSQTVKVTGSSAATPTNGFRAFVRRRELVIFFVLSYLIAWSTLPFGSFLP |
| Ga0307295_101328911 | 3300028708 | Soil | VQNEPNGPVSGEAAATPTSQTVDVTGSSAATPTNGFRAFVRRRELVIFFVLS |
| Ga0307315_100639331 | 3300028721 | Soil | MKTRIEQNEPNDPASGEASGTPTSQTVEVNGNSATAPTNGFRAFVRRRELVIFFV |
| Ga0307315_101403261 | 3300028721 | Soil | VQNEPNDPVSGEAAATPTSQTVKVTGSSAATPTNGFRAFVRRRELVIFFVLSYLIAWSTLPFG |
| Ga0307319_101548061 | 3300028722 | Soil | VQNEPNDPVSREAAATPTSQTVDVTGSSAATPTNGFRAFVRRRELVIFFVLSYLIA |
| Ga0307318_102205421 | 3300028744 | Soil | VQNEPNDPVSGEAAATRSSQTVDVTGSSAATPTNGFRTFVRRRELVIFFVLSYL |
| Ga0307297_102746841 | 3300028754 | Soil | MKTRIVQNEPNDPAPGEASGTPTIQTVEMTGRSATVPTNGFRAFVRRRELVIFFALSYLIAWSTLPWGSFLALSPLLSA |
| Ga0307280_100075871 | 3300028768 | Soil | MKTRIVQNEPNDPGSGEASITPQSQSPDAAASRAAPTNGFRAFVRRRELVIFF |
| Ga0307320_100236811 | 3300028771 | Soil | MKTRIEQNEPNDPISAEASGTPTIQTVEVNGNSATAPTNGFRAFVRRRELVIFFALTYLIAWSTLPFGTFLAFSPLVSAIVV |
| Ga0307320_100923682 | 3300028771 | Soil | METRMVQNEPNDPASGEPSVTPTVGSAEVTRSSATIPTNGFRAFVRRRELVIFFVLAYAIAWSPLPFGTFGAFSPIISAI |
| Ga0307288_100008061 | 3300028778 | Soil | MKTRIEQNEPNDPASGEASGTPTSQTVEVNGNSATAPTNGFRAFVRRRELVIFFVLSYLVAWSTLPIGTFI |
| Ga0307282_100242281 | 3300028784 | Soil | MKTRIVQNEPNDPVSGGAAVTPAGQASHITGSSATTSTNGFRAFVRRRELVIFFALSYVIAWSGLPFGSFLAFAPIVSAIVVVTIAEGLPG |
| Ga0307323_103813651 | 3300028787 | Soil | MKTRIVQSEPNDPTSGQASVTPTRQTADVTRSSAAPPTNGFRTFVRRRELVIFFALTYLIAWSTLP |
| Ga0307283_101654342 | 3300028790 | Soil | VQNEPNDPVSGEAAATPTSQTVDVTGSSAATPTNGFRAFVRRRELVIFFVLSYLIAWSTLPFGSF |
| Ga0307299_102403221 | 3300028793 | Soil | VQNEPNDPVSREAAATPTSQTVDVTGSSAATPTNGFRAFVRRRELVIFFVLSYLIAW |
| Ga0307299_104142402 | 3300028793 | Soil | MKTRIVQSEPNDPTSGQASVTPTRQTADVTRSSAAPPTNGFRTFVRRRELVIFFALSYLI |
| Ga0307292_100038891 | 3300028811 | Soil | VQNEPNDPVSGEAAATPTSQTVDVTGSSAATPTNGFRAFVRRRELVIFFVLSYLIA |
| Ga0307292_104864201 | 3300028811 | Soil | MKTRIVQNEPNDPVSGGAAVTPADQAADITGSSATTPTNGFRAFVRRRELVIFFVLSYLIAWSTLPF |
| Ga0307302_104672901 | 3300028814 | Soil | VQNEPNDPVSGEAAATRSSQTVDVTGSSAATPTNGFRTFVRRRELVIFFVL |
| Ga0307286_100024161 | 3300028876 | Soil | METRMVQNEPNDPASGEPSVTPTVGSAEVTRSSATIPTNGFRAFVRRRELVIFFVLAYAIAWSPLPFGT |
| Ga0307286_100570211 | 3300028876 | Soil | MKTRIVQNEPNDPVSGQASVTPTRQTDGVTGSSAATPTNGFRAFVRRRELVVFFALTY |
| Ga0307308_106036901 | 3300028884 | Soil | MKTRIVQNEPNDPVSGGAAVPPAGQPTDMTGSSATTSTNGFRAFVRRRELVIFFALTYLIAWSTVP |
| Ga0307304_102136192 | 3300028885 | Soil | VQNEPNDPVSGEAAATPTSQTVKVTGSSAATPTNGFRAFVRRRELVIFFVLSYLIAL |
| Ga0308192_10647581 | 3300031082 | Soil | MKTRIEQNEPNDPASGEASGTPTSQTVEVNGNSATAPTNGFRAFVRRRELVIFFVLSYLIAWSTLPIGTF |
| Ga0308187_100302271 | 3300031114 | Soil | MKTRIVQNEPNDPGSGEASITPQSQSPDAAASRAAPTNGFRAFVRRRELVIFFVLSYLIAWSPLPFG |
| Ga0307408_1000302462 | 3300031548 | Rhizosphere | MTTPGAGIVQNEPNDPVSGEAAVTPTSQTGDVRGSSAAPPTNGFRAFVRRRELVIFFVLSYLIAWSTLPFGAFLLLGLSCRRSLSS |
| Ga0307405_101397002 | 3300031731 | Rhizosphere | MTTPGAGIVQNEPNDPVSGEAAVTPTSQTGDVRGSSAAPPTNGSRAFVRRRELVIFFVLSYLIAWSTLPFGAFLLLGLSCRRSLSS |
| Ga0307413_100519555 | 3300031824 | Rhizosphere | MTTPGAGIVQNEPNDPVSGEAAVTPTSQTGDVRGSSAAPPTNGFRAFVRRRELVIFFVLSYLIAWSTLPFG |
| Ga0307410_100043364 | 3300031852 | Rhizosphere | VQNEPNDPVSGEAAVTPTSQTGDVRGSSAAPPTNGFRAFVRRRELVIFFVLSYLIAWSTLPFGAFLLLGLSCRRSLSS |
| Ga0307406_112951971 | 3300031901 | Rhizosphere | VQNEPNYPVSGEAAVTPTSPTVKVTGSSTATPTNGFRTFVRRRELVIFFVLSYLIAWSTLPLGSFLAFAPLVSAIVVV |
| Ga0307416_100000041136 | 3300032002 | Rhizosphere | MTTPGAGIVQNEPNDPVSGEAAVTPTSQTGDVRGSSAAPPTNGFRAFVRRRELVIFFVLSYLIAWSTLPF |
| Ga0307416_1002582001 | 3300032002 | Rhizosphere | MKTRIVQNEPNDPIPGEASGAAASPTADRSEQPVAAPTNAFRAFVRRRELVIFFVLSYLIAWSGMPFGSFYAFSP |
| Ga0307416_1007360383 | 3300032002 | Rhizosphere | VRYEPNDPVSGEAAATSTSQTGDVRGSSAAPPRNGFRAFVRRRELVIFFVLS |
| Ga0307416_1011111791 | 3300032002 | Rhizosphere | VQNEPSDPVSGEAAGTPTSQTVQVTGSSTATPTNGFRTFVRRRELVIFFVLSYL |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |