NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F106118

Metagenome Family F106118

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F106118
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 65 residues
Representative Sequence MQVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAVAFGSRPDIFYVLIPGYEDPFPIRTRQMELVNASR
Number of Associated Samples 70
Number of Associated Scaffolds 99

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 75.00 %
% of genes near scaffold ends (potentially truncated) 24.00 %
% of genes from short scaffolds (< 2000 bps) 73.00 %
Associated GOLD sequencing projects 60
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (47.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(46.000 % of family members)
Environment Ontology (ENVO) Unclassified
(89.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(90.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 7.29%    β-sheet: 26.04%    Coil/Unstructured: 66.67%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 99 Family Scaffolds
PF07728AAA_5 4.04
PF05728UPF0227 2.02
PF13203DUF2201_N 2.02
PF00118Cpn60_TCP1 1.01
PF12728HTH_17 1.01
PF01909NTP_transf_2 1.01
PF00856SET 1.01
PF13365Trypsin_2 1.01
PF11645PDDEXK_5 1.01
PF00462Glutaredoxin 1.01

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 99 Family Scaffolds
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 1.01


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms53.00 %
UnclassifiedrootN/A47.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10073429All Organisms → Viruses → Predicted Viral1559Open in IMG/M
3300001450|JGI24006J15134_10000143Not Available57887Open in IMG/M
3300001460|JGI24003J15210_10136544Not Available647Open in IMG/M
3300002488|JGI25128J35275_1000336All Organisms → cellular organisms → Bacteria14661Open in IMG/M
3300002514|JGI25133J35611_10051459All Organisms → cellular organisms → Bacteria1388Open in IMG/M
3300002514|JGI25133J35611_10175135Not Available575Open in IMG/M
3300005430|Ga0066849_10018016All Organisms → Viruses → Predicted Viral2869Open in IMG/M
3300005514|Ga0066866_10053861All Organisms → cellular organisms → Bacteria1519Open in IMG/M
3300006735|Ga0098038_1019543All Organisms → Viruses → Predicted Viral2585Open in IMG/M
3300006751|Ga0098040_1017319All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2385Open in IMG/M
3300006752|Ga0098048_1109214Not Available834Open in IMG/M
3300006754|Ga0098044_1003022All Organisms → cellular organisms → Bacteria8547Open in IMG/M
3300006754|Ga0098044_1288364Not Available630Open in IMG/M
3300006789|Ga0098054_1030879All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium2096Open in IMG/M
3300006789|Ga0098054_1085694All Organisms → Viruses → Predicted Viral1186Open in IMG/M
3300006789|Ga0098054_1240199Not Available655Open in IMG/M
3300006793|Ga0098055_1026401All Organisms → Viruses → Predicted Viral2433Open in IMG/M
3300006793|Ga0098055_1036498All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium2020Open in IMG/M
3300006923|Ga0098053_1065961Not Available738Open in IMG/M
3300006928|Ga0098041_1240352Not Available578Open in IMG/M
3300007229|Ga0075468_10054178All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium1355Open in IMG/M
3300008050|Ga0098052_1339181Not Available564Open in IMG/M
3300009074|Ga0115549_1069879All Organisms → Viruses → Predicted Viral1212Open in IMG/M
3300009132|Ga0118730_1305666All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium813Open in IMG/M
3300009426|Ga0115547_1055459All Organisms → Viruses → Predicted Viral1386Open in IMG/M
3300009593|Ga0115011_10002433Not Available12938Open in IMG/M
3300009593|Ga0115011_10011916All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium5789Open in IMG/M
3300009593|Ga0115011_10111348All Organisms → Viruses → Predicted Viral1946Open in IMG/M
3300009593|Ga0115011_10152471All Organisms → Viruses → Predicted Viral1677Open in IMG/M
3300009790|Ga0115012_10008237All Organisms → cellular organisms → Bacteria6276Open in IMG/M
3300009790|Ga0115012_10029826All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium3517Open in IMG/M
3300009790|Ga0115012_10299209Not Available1210Open in IMG/M
3300010149|Ga0098049_1021136All Organisms → Viruses → Predicted Viral2145Open in IMG/M
3300010149|Ga0098049_1166344Not Available680Open in IMG/M
3300010149|Ga0098049_1284234Not Available500Open in IMG/M
3300014818|Ga0134300_1027511All Organisms → cellular organisms → Bacteria1216Open in IMG/M
3300017697|Ga0180120_10288280Not Available659Open in IMG/M
3300017705|Ga0181372_1010330All Organisms → Viruses → Predicted Viral1681Open in IMG/M
3300017705|Ga0181372_1067576Not Available604Open in IMG/M
3300017710|Ga0181403_1026612All Organisms → Viruses → Predicted Viral1224Open in IMG/M
3300017717|Ga0181404_1109252Not Available676Open in IMG/M
3300017719|Ga0181390_1173227Not Available531Open in IMG/M
3300017720|Ga0181383_1145028Not Available638Open in IMG/M
3300017724|Ga0181388_1111290All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300017724|Ga0181388_1132869All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium593Open in IMG/M
3300017724|Ga0181388_1177214Not Available505Open in IMG/M
3300017728|Ga0181419_1094767Not Available738Open in IMG/M
3300017730|Ga0181417_1163592All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300017731|Ga0181416_1101261Not Available687Open in IMG/M
3300017733|Ga0181426_1098786Not Available586Open in IMG/M
3300017738|Ga0181428_1077488Not Available775Open in IMG/M
3300017738|Ga0181428_1108061Not Available651Open in IMG/M
3300017743|Ga0181402_1117615Not Available682Open in IMG/M
3300017745|Ga0181427_1003292All Organisms → Viruses → Predicted Viral4070Open in IMG/M
3300017745|Ga0181427_1088968Not Available755Open in IMG/M
3300017748|Ga0181393_1009269All Organisms → Viruses → Predicted Viral3032Open in IMG/M
3300017750|Ga0181405_1178449Not Available518Open in IMG/M
3300017756|Ga0181382_1064717All Organisms → Viruses → Predicted Viral1031Open in IMG/M
3300017757|Ga0181420_1086545Not Available973Open in IMG/M
3300017759|Ga0181414_1099202All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300017763|Ga0181410_1165440Not Available617Open in IMG/M
3300017764|Ga0181385_1056715All Organisms → Viruses → Predicted Viral1216Open in IMG/M
3300017764|Ga0181385_1068188All Organisms → Viruses → Predicted Viral1098Open in IMG/M
3300017768|Ga0187220_1235763Not Available548Open in IMG/M
3300017768|Ga0187220_1235763Not Available548Open in IMG/M
3300017769|Ga0187221_1073057All Organisms → Viruses → Predicted Viral1073Open in IMG/M
3300017772|Ga0181430_1077947All Organisms → Viruses → Predicted Viral1002Open in IMG/M
3300017776|Ga0181394_1204966Not Available600Open in IMG/M
3300017782|Ga0181380_1166795Not Available746Open in IMG/M
3300020165|Ga0206125_10003573All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria14699Open in IMG/M
3300020165|Ga0206125_10005151Not Available11188Open in IMG/M
3300020182|Ga0206129_10101154All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium1511Open in IMG/M
3300020385|Ga0211677_10189231Not Available857Open in IMG/M
3300022178|Ga0196887_1053420All Organisms → Viruses → Predicted Viral1022Open in IMG/M
3300025103|Ga0208013_1168405Not Available513Open in IMG/M
3300025120|Ga0209535_1043929All Organisms → Viruses → Predicted Viral1967Open in IMG/M
3300025120|Ga0209535_1053717All Organisms → Viruses → Predicted Viral1696Open in IMG/M
3300025128|Ga0208919_1143994Not Available742Open in IMG/M
3300025132|Ga0209232_1001153All Organisms → cellular organisms → Bacteria14670Open in IMG/M
3300025141|Ga0209756_1003071All Organisms → cellular organisms → Bacteria13803Open in IMG/M
3300025141|Ga0209756_1218532Not Available717Open in IMG/M
3300025168|Ga0209337_1000103Not Available68795Open in IMG/M
3300025168|Ga0209337_1019333All Organisms → Viruses → Predicted Viral4006Open in IMG/M
3300025168|Ga0209337_1021218All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium3777Open in IMG/M
3300025168|Ga0209337_1025495All Organisms → Viruses → Predicted Viral3361Open in IMG/M
3300025594|Ga0209094_1048174All Organisms → Viruses → Predicted Viral1120Open in IMG/M
3300026257|Ga0208407_1144254Not Available727Open in IMG/M
3300027906|Ga0209404_10001407Not Available16204Open in IMG/M
3300027906|Ga0209404_10003819All Organisms → cellular organisms → Bacteria → Proteobacteria8746Open in IMG/M
3300028022|Ga0256382_1156059Not Available547Open in IMG/M
3300031766|Ga0315322_10180339All Organisms → Viruses → Predicted Viral1490Open in IMG/M
3300031774|Ga0315331_10050266All Organisms → Viruses → Predicted Viral3094Open in IMG/M
3300031774|Ga0315331_10323549All Organisms → Viruses → Predicted Viral1135Open in IMG/M
3300031774|Ga0315331_10337792Not Available1107Open in IMG/M
3300031774|Ga0315331_10542182Not Available839Open in IMG/M
3300031775|Ga0315326_10477238Not Available804Open in IMG/M
3300032032|Ga0315327_10669673Not Available637Open in IMG/M
3300032073|Ga0315315_10715074Not Available917Open in IMG/M
3300032088|Ga0315321_10257172All Organisms → cellular organisms → Bacteria1127Open in IMG/M
3300032088|Ga0315321_10267399All Organisms → Viruses → Predicted Viral1100Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine46.00%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater30.00%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater10.00%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater4.00%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine3.00%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous2.00%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.00%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.00%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300002488Marine viral communities from the Pacific Ocean - ETNP_2_60EnvironmentalOpen in IMG/M
3300002514Marine viral communities from the Pacific Ocean - ETNP_6_85EnvironmentalOpen in IMG/M
3300005430Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69EnvironmentalOpen in IMG/M
3300005514Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263EnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009132Combined Assembly of Gp0139359, Gp0139510EnvironmentalOpen in IMG/M
3300009426Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420EnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300014818Marine microbial communities to study oil droplet degradation from Trondheimsfjord, Norway - 0152 : 8 days incubationEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017730Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017733Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23EnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300017750Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017763Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017769Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)EnvironmentalOpen in IMG/M
3300017772Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020182Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2EnvironmentalOpen in IMG/M
3300020385Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025594Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430 (SPAdes)EnvironmentalOpen in IMG/M
3300026257Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300031766Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515EnvironmentalOpen in IMG/M
3300031774Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300032032Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M
3300032088Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1007342923300000101MarineMKIGDLVRCTTVDGKPVGLVVERFFFVSEPRTHTDIFYVLIPGYEDPFPIRTRQMELVNASR*
JGI24006J15134_10000143543300001450MarineMQVGDLVRCMTIDNKPVGLVVGRFNPAHNPLDAVAFGSRPDIFYVMIPGYEDSFPIRTRQMELVNASR*
JGI24003J15210_1013654413300001460MarineMKVGDLVRCMTVDGKPVGLIVERFNPAHNPLDAMAFGSRPDIFYVLIPRYEDPFPIRTRQMELVNASR*
JGI25128J35275_100033683300002488MarineMKVGDLVRCMTVDGKPVGLVVEEFRFAMKPTNETEIFYVLIPGYEDPFPIRTSQMELVNASR*
JGI25133J35611_1005145933300002514MarineMKVGDLVRCMTVDGNPVGLVVERFSPAHSRLDSPKARPDIFYVLIPGYEDSFPIRTNQMELVNASR*
JGI25133J35611_1017513513300002514MarineGDLVRCTTVDGKPVGLVVERFDPAHNPLDAMAFGSRPDIFYVLIPGYEDPFPIRTRQMELVNASR*
Ga0066849_1001801683300005430MarineMKVGDLVRCMMVDGRPVGLVVERFNPAHNPLDTVAFGSRPDIFYVLIPGYEDPFPIRTRQMELVNASR*
Ga0066866_1005386153300005514MarineMKVGDLVRCMMVDGRPVGLVVERFVFAVKPTNHTDIFYVLIPGYEDPFPIRTSQMELVNASR*
Ga0098038_101954343300006735MarineVQVGDLVKCTTIDGNPVGLIVERFNPAHNPLDAVAFGSRPDIFYVLIPGYQDPFPIRTRQMELVNASR*
Ga0098040_1017319113300006751MarineMKIGDLVKCMTVDGQPVGLVVERFTAAHSRLDRPKLRPDIFYVLIPGYEDSFPIRTSQMEKINVS*
Ga0098048_110921413300006752MarineMQVGDLVRCTTVDGKPVGLVVERFSPAHSRLDSPKLRPDIFYVLIPGYEDSFPIRTSQMELVNAS
Ga0098044_100302213300006754MarineMQVGDLVRCTTVDGKPVGLVVERFSPAHSRLDSPKLRPDIFYVLIPGYEDSFPIRTNQMELVNASR*
Ga0098044_128836423300006754MarineMKDRDIKIGDLVRCMTVDRRPVGLVVERFVFAVKPTNHTDIFYVLIPGYEDPFPIRTRQMELVNASR*
Ga0098054_103087953300006789MarineMQVGDLVRCTTVDGKPVGLVVERFFFVSEPRTHTDIFYVLIPGYEDPFPIRTRQMELVNASR*
Ga0098054_108569413300006789MarineLMQVGDLVRCMTVDGKPVGLIVERFISESPMVPMPPMKRVDIFYVLIPGYEDPFPIRTRQMELVNASR*
Ga0098054_124019923300006789MarineMQVGDLVRCTTVDGKPVGLVVERFSPAHSRLDSPKLRPDIFYVLIPGYEDSFPIRTSQMELVNASR*
Ga0098055_102640173300006793MarineMQVGDLVRCTTVDGKPVGLVVERFFFVSEPRTHTDIFYVLIPGYEDPFPIRTRQMELVNA
Ga0098055_103649863300006793MarineMQVGDLVRCMMVEGKPVGLVVERFVFEVHPVNRTDIFYVLIPGYEDPFPIRTRQMELVNASR*
Ga0098053_106596123300006923MarineVQVGDLVRCLTVDGKPVGLVVERFVFEVHPVNRTDIFYVLIPGYEDPFPIRTRQMELVNASR*
Ga0098041_124035213300006928MarineLVRCTTVDGKPVGLVVERFFFVSEPRTHTDIFYVLIPGYEDPFPIRTRQMELVNASR*
Ga0075468_1005417813300007229AqueousLMKIGDLVRCTTVDGKPVGLVVERFFFVSEPRTHTDIFYVLIPGYEDPFPIRTRQMELVNASR*
Ga0098052_133918113300008050MarineMQVGDLVRCTTVDGKPVGLVVERFSPAHSRLDSPKLRPDIFYVLIPGYEDSFPIKTSQMELVNASR*
Ga0115549_106987963300009074Pelagic MarineMQVGDLVRCTTVDGKPVGLVVERFFFVSEPRTHTDIFYVLIPGYGDPFPIRTRQMELVNASR*
Ga0118730_130566623300009132MarineVKVGDLVKCTTVEGKPVGLVVERFSPAHSRLDSPRLRPDIFYVLIPGYEDSFPIRASQMELINASR*
Ga0115547_105545943300009426Pelagic MarineMQVGDLVRCTTVDGKPVGLVVERFSPAHSRLDSPRARPDIFYVLISGYEEPFPIRTRQMELVNASR*
Ga0115011_1000243313300009593MarineMKIGDLVRCLTVEGKPVGLVVEKFVFEAKPTNETDIFYVLIPRYEDPFPIRTSQVEV
Ga0115011_10011916233300009593MarineMKDKDIKIGDLVRCTTVDGKPVGLVVERFSPKTTMPANTIFYVLIPRYEDPFPIRTSQVEVINESR*
Ga0115011_1011134813300009593MarineVGDLVKCMTVDGRPVGLIVERFFFVSEPSTPTGIFYVLIPGHEDPFPIRTRQMELVSASR
Ga0115011_1015247123300009593MarineMKIGDLVRCMTVDGKPMGLIVERFTAAHSRLDRPRLRPDIFYVLIPGYEDSFPIRTSQMELVNASR*
Ga0115012_10008237203300009790MarineMGTIKAGDLVRCMTVDGQPVGLVVERFTAAHSRLDRPRLRPDIFYVLIPGYEEPFPIRTRQMEVVSASR*
Ga0115012_1002982663300009790MarineMRVGDLVRCMTVDGKPVGLVVERFTAAHSRLDRPRLRPDIFYVLIPGYEDPFPIRTRQMELVSASR*
Ga0115012_1029920923300009790MarineMQVGDLVRCMTVDGRPVGLIVERFFFVSEPSTPTGIFYVLIPGHEDPFPIRTRQMELVSASR*
Ga0098049_102113653300010149MarineDGKPVGLVVERFTSGSPMVPMSPMRRVDIFYVLIPGHEDPFPIRTRQMELVNESR*
Ga0098049_116634423300010149MarineMMVEGKPVGLVVERFVFEVHPVNRTDIFYVLIPGYEDPFPIRTRQMELVNASR*
Ga0098049_128423423300010149MarineMQVGDLVRCMTVDGKPVGLIVERFISESPMVPMPPMKRVDIFYVLIPGYEDPFPIRTRQMEVVNASR*
Ga0134300_102751133300014818MarineMQVGDLVRCTTVDGKPVGLVVERFSPAHSRLDSPRARPDIFYVLICGYEDPFPIRTRQMELVNASR*
Ga0180120_1028828023300017697Freshwater To Marine Saline GradientMKVGDLVRCTTVDGKPVGLVVERFFFVSEPRTHTDIFYVLIPGYEDPFPIRTRQMELVNANR
Ga0181372_101033033300017705MarineMQVGDLVRCTTVDGKPVGLVVERFFFVSEPRTHTDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0181372_106757613300017705MarineMKVGDLVRCTTVDGRPVGLVVERFVFAVKPTNHTDIFYVLIPGYEDPFPIRTSQMELV
Ga0181403_102661243300017710SeawaterMKVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAVAFGSRPDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0181404_110925233300017717SeawaterMQVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAVAFGSRPDIFYVLIPGYEDPFPIRT
Ga0181390_117322723300017719SeawaterMQVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAVAFGSRPDIFYVLIPGYEDPFPIRTRQMELVNESR
Ga0181383_114502813300017720SeawaterMQVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAVAFGSRPDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0181388_111129013300017724SeawaterMKERDIKIGDLVRCTTVDKRPVGLVVERFNPAHNPLDAMAFGSRPDIFYVLIPGYEDPFPIRT
Ga0181388_113286933300017724SeawaterMKVGDLVKCTTVDGKPVGLVVERFNPAHNPLDAMAFGSRPDIFYVLIPGYEDPFP
Ga0181388_117721423300017724SeawaterMQVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAVAFGSRPDIFYVLIPGYEDPFPIRTRQMELV
Ga0181419_109476723300017728SeawaterMKVGDLVRCTTVDGKPVGLIVERFNPAHNPLDAVAFGSRPDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0181417_116359213300017730SeawaterMKVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAMAFGSRPDIFYVLIPGYVDPFPFRTRQMELVNASR
Ga0181416_110126123300017731SeawaterMKVGDLVKCTTVDGKPVGLVVERFNPAHNPLDAMAFGSRPDIFYVLIPGYEDPFPIRTRQMELVNAS
Ga0181426_109878613300017733SeawaterMQVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAMAFGSRPDIFYVLIPGYEDPFPIRTRQMVLVL
Ga0181428_107748823300017738SeawaterMQVGDLVRCMTVDGQPIGLVVERFTAAHSRLDRPKLRPDIFYVLIPGYEDSFPIRTSQMEKINVS
Ga0181428_110806133300017738SeawaterMQVGDLVRCMTVDGKPVGLVVERFNPAHNPLDAMAFGSRPDIFYVLIPGYVDPFPFRTRQMELVNASR
Ga0181402_111761523300017743SeawaterMKVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAMAFGSRPDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0181427_100329223300017745SeawaterMQVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAVAFGSRPDIFYVLIPGYVDPFPFRTRQMELVNASR
Ga0181427_108896843300017745SeawaterMQVGDLVRCTTVDGKPVGLVVERFNPAHNPWDAVACGSRPDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0181393_100926943300017748SeawaterMKVGDLVRCTTVDGTPVGLVVERFNPAHNPLDAVAFGSRPDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0181405_117844933300017750SeawaterMKVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAVAFGSRPDIFYVLIPGYEDPFPIRTRQMELV
Ga0181382_106471713300017756SeawaterRDIKIGDLVRCTTVDKRPVGLVVERFNPAHNPLDAMAFGSRPDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0181420_108654523300017757SeawaterMQVGDLVRCTTVDGKPMGLVVERFNPAHNPLDAMAFGSRPDIFYVLIPGYEDPFPIRTSQMELVNESR
Ga0181414_109920213300017759SeawaterVGDLVRCTTVDGKPVGLVVERFSPAHSRLDSPRLRPDIFYVLIPGYEDSFPIRTSQMELVNASR
Ga0181410_116544023300017763SeawaterMKERDIKIGDLVRCTTVDKRPVGLVVERFNPAHNPLDAMAFGSRPDIFYVLIPGYEDPFPIRTRQMEVVNASR
Ga0181385_105671553300017764SeawaterMQVGDLVRCLTVEGKPVGLVLEKFVFEVKPTNETDIFYVLIPHHEDPFPIRTSQVEVIHASR
Ga0181385_106818843300017764SeawaterMQVGDLVKCTTVDGKPVGLVVEEFRFEMKPTNETEIFYVLIPGYEDPFPIRASQMELVNANR
Ga0187220_123576313300017768SeawaterMKVGDLVRCTTVDGKPVGLVVERFVFVMKPTNHTDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0187220_123576323300017768SeawaterMKVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAVAFGSRPDIFYVLIPGYEDPFPIRTRQMELVNESR
Ga0187221_107305753300017769SeawaterALTASRCYVIYMKERDIKIGDLVRCTTVDKRPVGLVVERFNPAHNPLDAMAFGSRPDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0181430_107794713300017772SeawaterKKKLAVTASRSYIICMKDRDIKIGDLVRCTTVDKRPVGLVVERFNPAHNPLDAMAFGSRPDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0181394_120496613300017776SeawaterMKVGDLVRCMTVDGKPVAVGLIVERFISASPMVPMPPMKRVDIFYVLIPGYEDPFPI
Ga0181380_116679523300017782SeawaterMKVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAVAFGSRPDIFYVLIPRYEDPFPIRTSQMELVNASR
Ga0206125_10003573443300020165SeawaterMQVGDLVRCTTVDGKPVGLVVERFSPAHSRLDSPRARPDIFYVLISGYEEPFPIRTRQMELVNASR
Ga0206125_1000515143300020165SeawaterMQVGDLVRCTTVDGKPVGLVVERFFFVSEPRTHTDIFYVLIPGYEDPFPIRTRQMELVNANR
Ga0206129_1010115413300020182SeawaterMQVGDLVRCTTVDGKPVGLVVERFSPAHSRLDSPRARPDIFYVLISGYEEPFPIRT
Ga0211677_1018923123300020385MarineMQVGDLVRCTTVDGKPVGLVVERFTSASPMVPMSPMRRVDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0196887_105342023300022178AqueousMKIGDLVRCTTVDGKPVGLVVERFFFVSEPRTHTDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0208013_116840523300025103MarineMQVGDLVRCTTVDGKPVGLVVERFSPAHSRLDSPKLRPDIFYVLIPGYEDSFPIRTSQMELVNASR
Ga0209535_104392963300025120MarineMKVGDLVRCMTVDGKPVGLIVERFNPAHNPLDAMAFGSRPDIFYVLIPRYEDPFPIRTRQMELVNASR
Ga0209535_105371733300025120MarineMQVGDLVRCTTVDGKPVGLIVERFNPAHNPLDAVAFGSRPDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0208919_114399433300025128MarineRSYIIYMKVGDLVRCMTVDGRPVGLVVERFFFVSEPKTHTDIFYVLIPSYEDPFPIRTRQMELVNASR
Ga0209232_1001153463300025132MarineMKVGDLVRCMTVDGKPVGLVVEEFRFAMKPTNETEIFYVLIPGYEDPFPIRTSQMELVNASR
Ga0209756_1003071133300025141MarineMKVGDLVRCMMVDGRPVGLVVERFVFAVKPTNHTDIFYVLIPGYEDPFPIRTSQMELVNASR
Ga0209756_121853223300025141MarineMKVGDLVRCMTVDGNPVGLVVERFSPAHSRLDSPKARPDIFYVLIPGYEDSFPIRTNQMELVNASR
Ga0209337_1000103623300025168MarineMQVGDLVRCMTIDNKPVGLVVGRFNPAHNPLDAVAFGSRPDIFYVMIPGYEDSFPIRTRQMELVNASR
Ga0209337_1019333153300025168MarineMQVGDLVRCTTVDGKPVGLVVERFSPAHSRLDSPRLRPDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0209337_1021218113300025168MarineMQVGDLVRCTTIDGNPVGLIVERFISASPMVPIPPMRRVDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0209337_1025495103300025168MarineMQVGDLVRCTTVDGKPVGLVVERFVFVSEPTTPTDIFYVMIPGYEASFPIRTRQMELVNASR
Ga0209094_104817443300025594Pelagic MarineMQVGDLVRCTTVDGKPVGLVVERFFFVSEPRTHTDIFYVLIPGYGDPFPIRTRQMELVNASR
Ga0208407_114425423300026257MarineMKVGDLVRCMMVDGRPVGLVVERFNPAHNPLDTVAFGSRPDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0209404_10001407173300027906MarineMKIGDLVRCLTVEGKPVGLVVEKFVFEAKPTNETDIFYVLIPRYEDPFPIRTSQVEVINESR
Ga0209404_10003819133300027906MarineMGTIKVGDLVKCMTVDGRPVGLIVERFFFVSEPSTPTGIFYVLIPGHEDPFPIRTRQMELVSASR
Ga0256382_115605913300028022SeawaterMKVGDLVKCMTVDGRPVGLIVERFFFVSEPSTPTDIFYVLILGHEDPFPIRTRQMELVNASR
Ga0315322_1018033923300031766SeawaterMQVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAMAFGSRPDIFYVLIPGYEDPFPIRTSQMELVNESR
Ga0315331_1005026663300031774SeawaterMQVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAMAFGSRPDIFYVLIPGYVDPFPFRTRQMELVNASR
Ga0315331_1032354913300031774SeawaterMKDRDIKIGDLVRCMTVDRRPVGLVVERFVFAVKPTNHTDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0315331_1033779243300031774SeawaterMQVGDLVRCTTVDGKPVGLVVERFVFAMKPVNTTDIFYVLIPGYEDPFPIRTSQMELINASR
Ga0315331_1054218233300031774SeawaterMQVGDLVRCTTVDGKPVGLIVERFISASPMVPMPPMKRVDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0315326_1047723823300031775SeawaterMQVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAMAFGSRPDIFYVLIPRYEDPFPIRTSQMELVNASR
Ga0315327_1066967323300032032SeawaterMQVGDLVRCTTVDGKPVGLIVERFNPAHNPLDAVAFGSRPDIFYVLIPGYEDPFPIRTSQMELVNESR
Ga0315315_1071507423300032073SeawaterMQVGDLVKCTTVDGKPVGLVVERFNPARNPLDTLAFGSRPDIFYVLIPGYEDPFPIRTSQMELVNASR
Ga0315321_1025717253300032088SeawaterMQVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAMAFGSRPDIFYVLIPGYEDPFPIRTRQMELVNASR
Ga0315321_1026739933300032088SeawaterMQVGDLVRCTTVDGKPVGLVVERFNPAHNPLDAVAFGSRPDIFYVLIPGYEDPFPIRTSQMELVNESR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.