Metagenome Family F106074

Overview

Basic Information

• Family ID: F106074
• Family Type: Metagenome
• Number of Sequences: 100
• Average Sequence Length: 52 residues
• Representative Sequence: MRFIDETDCKLSVSNGSVNVLSTSKMKTIFLLTLDFAAESTRCRGMISRLQ
• Number of Associated Samples: 5
• Number of Associated Scaffolds: 100

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 0.00 %
• % of genes from short scaffolds (< 2000 bps): 0.00 %
• Associated GOLD sequencing projects: 4
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (100.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Tunicates → Ascidians → Unclassified → Unclassified → Ecteinascidia Turbinata (100.000 % of family members)
• Environment Ontology (ENVO): Unclassified (100.000 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal corpus (100.000 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 41.77%
  β-sheet: 0.00%
  Coil/Unstructured: 58.23%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF05699	Dimer_Tnp_hAT	3.00
PF01758	SBF	2.00
PF00002	7tm_2	1.00
PF08385	DHC_N1	1.00
PF00078	RVT_1	1.00
PF06936	Selenoprotein_S	1.00
PF12739	TRAPPC-Trs85	1.00

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001463|JGI24021J15306_10008312	Not Available	12762
3300027611|Ga0210059_1001202	Not Available	38123
3300027611|Ga0210059_1035721	Not Available	5698

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Class

Habitat	Taxonomy	Distribution
Tunicates	Host-Associated → Tunicates	100.00%

Category

Habitat	Taxonomy	Distribution
Ascidians	Host-Associated → Tunicates → Ascidians	100.00%

Type

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Tunicates → Ascidians → Unclassified	100.00%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Tunicates → Ascidians → Unclassified → Unclassified	100.00%

Habitat

Habitat	Taxonomy	Distribution
Ecteinascidia Turbinata	Host-Associated → Tunicates → Ascidians → Unclassified → Unclassified → Ecteinascidia Turbinata	100.00%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001463	Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 1	Host-Associated
3300001539	Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 2	Host-Associated
3300001689	Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 4	Host-Associated
3300001913	Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 3	Host-Associated
3300027611	Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 2 (SPAdes)	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24021J15306_1000078545	3300001463	Ecteinascidia Turbinata	MRFIDETVCKLSVNNNSVNVLTASKMKTTFLLLDFAAESTRCRGMISRLQ*
JGI24021J15306_1000550529	3300001463	Ecteinascidia Turbinata	MRFIDETDCKLSVNNGSVNVLSTSKMKTIFLLTLDFAVETTRCRGMISRLQ*
JGI24021J15306_1000713722	3300001463	Ecteinascidia Turbinata	MRFNDATDCKLSVSMDSVSVLSTSKMKTVFLLTLDFAAEITRCRE*
JGI24021J15306_100074535	3300001463	Ecteinascidia Turbinata	MRFIDKTDCKLSVSSGSVNVLSTSKIKTIFLLTLDFAAEPTRCIREMISNLQYRVAIDIR
JGI24021J15306_100083126	3300001463	Ecteinascidia Turbinata	MRFINETDCKLSVSNGSVNVLSPSKMKTIFLLTLGFTAETTRCRGMISRLQ*
JGI24021J15306_100094646	3300001463	Ecteinascidia Turbinata	MRFSDEMDCKLSVSIGIVNVPKTSKMKTNFLLKLDFAAESARCRRMISRLQ*
JGI24021J15306_100120272	3300001463	Ecteinascidia Turbinata	MRFVDETDCKLSVSNGSVNVLSTSKMKTIFLLTLGFAAETTRYKGMISRLQ*
JGI24021J15306_1001288913	3300001463	Ecteinascidia Turbinata	MRFIDKTDCKLSVSIGSVNVLSTSKIKNIFLLAAEPTRCMGMIPSLQ*
JGI24021J15306_1001458310	3300001463	Ecteinascidia Turbinata	MRFINETDIDCELSVSNGSVNVLSTSKMKTIFLLTLDFAAEATRCRGTISRLQ*
JGI24021J15306_100277189	3300001463	Ecteinascidia Turbinata	MRFIDETNCNLSVNNDNVNLLSTSKMKTIFLLTLDFVAETARWRGMVSRLQ*
JGI24021J15306_100302272	3300001463	Ecteinascidia Turbinata	MRLIDEADCKLFVNNGSVNILSTSKMKTIFLPLDFAAESTRYRRMISRL*
JGI24021J15306_100313093	3300001463	Ecteinascidia Turbinata	MRFIDEIDCKLSVSNRSVNVLCTSKMKTIFLLTLDFAAESTRGRGLISRLQYDRVAISIR
JGI24021J15306_100313616	3300001463	Ecteinascidia Turbinata	MRFIDETDCKLSVSNGSVNILSIFKMKTIFLLTLDFAAESTRCRGMISRLQ*
JGI24021J15306_100323995	3300001463	Ecteinascidia Turbinata	MRFIDETDCKLSVSNDSVRVLSNSKMNTIFLLTLDFAAETTRWRGMISRLQ*
JGI24021J15306_100424037	3300001463	Ecteinascidia Turbinata	MRFIDETDFKLSVSNGSDNVLSTSKIKNIFLVTSDFAAETTRCRGMISRLQ*
JGI24021J15306_100526352	3300001463	Ecteinascidia Turbinata	MRFIDETVCKLSVNNNSVNVLSTSKMQTIFLLLDFAAESTRCRGMISRLQ*
JGI24021J15306_100627579	3300001463	Ecteinascidia Turbinata	MRFIDETVCKLSVNNGSVNVLSTSKMKTIFLLLDFATESTRCRGVISRLQ*
JGI24021J15306_100748335	3300001463	Ecteinascidia Turbinata	MGFIDETDCKLSVNNGSVNILSTSKTKTIFVPLDFAAESTRCRRMISSFSVGYGGN*
JGI24021J15306_100936814	3300001463	Ecteinascidia Turbinata	MRFIDETDKLSXGNGSDNVLSTSKMKTIFLLTLDFAAKSTRYSGMISRLQ*
JGI24021J15306_101073533	3300001463	Ecteinascidia Turbinata	MRFIDETDCKLSVSNGSISVLSTSKMKTIFLLTLDFAAETTNCREWFHVYSSVAINIR*
JGI24021J15306_101327282	3300001463	Ecteinascidia Turbinata	MRFITETDCKLSVSNGSVNVLSTSKMNTVFLLTLDFAAEFTRCKEMISRLQ*
JGI24021J15306_101344801	3300001463	Ecteinascidia Turbinata	MRFIDETDCKLSVSNCSVSVLSTSKMKTIFLLTLDFAAETTCCREWF
JGI24021J15306_101397142	3300001463	Ecteinascidia Turbinata	MRFIDETDCNPAVSNGSDNVLSTSKIKTVLLLRLDFANEFARYISRMISRLQ*
JGI24021J15306_101469643	3300001463	Ecteinascidia Turbinata	MRFIDETDIDCKLSVSNGSVNVLSTSKIKTIFLLTLDFAAETTRGRGTISHLQ*
JGI24021J15306_101620662	3300001463	Ecteinascidia Turbinata	MRFIDETDCKLSVCNGGINVLNTSKMKTIFLLTLDFAAESTRCRGMISRLQ*
JGI24021J15306_101645272	3300001463	Ecteinascidia Turbinata	MRFIDETDIDCKLSVSNGSVNVLSTSKLKTIFLLMLDFAADITRCRGTISRLQ*
JGI24021J15306_101694822	3300001463	Ecteinascidia Turbinata	MRFIDKTDCKLSVSNGSVTVLSTSKTENIFLHTLDFAAESTRCRGMNDFKFTV*
JGI24022J15233_1000319614	3300001539	Ecteinascidia Turbinata	MHFIDETDCKLSGSNGSVNVLSTSKMKTIFLPTLGFAAETTRCGRMISRLQ*
JGI24022J15233_100049265	3300001539	Ecteinascidia Turbinata	MRFIDETDCKLSINKGSVNVLSVSKMKTIFLLTSDLAAESTRSRGMISRLQ*
JGI24022J15233_1000991115	3300001539	Ecteinascidia Turbinata	MRFIDETGIDCKLSLSKGTVNVLSTSKMKTIFLLTLDFAAETTRCRGTISR
JGI24022J15233_100205335	3300001539	Ecteinascidia Turbinata	MRFIDETDCKLSVSNRSVNILRTSKMKTIFLLTLDFAAESTRCRGMISLLQ*
JGI24022J15233_100279153	3300001539	Ecteinascidia Turbinata	MRFIDKTDCKLSVSNGTVSVLNTSKMKTIFLLMLGIAAETTHCRGMISRLQ*
JGI24022J15233_100329068	3300001539	Ecteinascidia Turbinata	MRFIDETVCKLSVNNNSVNVLITSKMKTIFLLLDFADDSTRCRGMISRLH*
JGI24022J15233_100440027	3300001539	Ecteinascidia Turbinata	MRFINETDIDCKLSVSNGSVNVLSTSKMKTIFLLTLDFAAET
JGI24022J15233_100508693	3300001539	Ecteinascidia Turbinata	MRFIDETDIDCKLSVNEDSVNVLSTSKMKTTFLFTLDFAVETTRCRGMISSLQ*
JGI24022J15233_100512352	3300001539	Ecteinascidia Turbinata	MRFIEEADCKLSASNGSVNVLSTSKMKTIFLPTLDFAAKSTRCRGMISRLQ*
JGI24022J15233_100536181	3300001539	Ecteinascidia Turbinata	MRFIDEIYCKLSVSNGSVSVLSTSKMKTIFLLTLDFAAETTRCREWFHVYSR
JGI24022J15233_100632782	3300001539	Ecteinascidia Turbinata	MRFIDETDCKLSVSNGSVNVLSTSKMKTIFLLTLDFAAESTRCRGMISRLQ*
JGI24022J15233_100664174	3300001539	Ecteinascidia Turbinata	MRFVYETDCKLSVSNGSVNVLSTSKMKTIFLLTLGFAAETTRYKGMISRLQ*
JGI24022J15233_100759393	3300001539	Ecteinascidia Turbinata	MRFSDEMDCKLSVSIGIVNVPKTSEMKTNFLLKLDFAAESARCRRMISRLQ*
JGI24022J15233_100794914	3300001539	Ecteinascidia Turbinata	MRFIDETDYKLSVSNDSVNVLSTSKMKTICPLTLDFTAETTRCRGMISHLQ*
JGI24022J15233_100816953	3300001539	Ecteinascidia Turbinata	MRFIDETDCKLSVSNDSVNALSTSKMKTIFLLTLDFAAETTRSRGMISHLQ*
JGI24022J15233_101066037	3300001539	Ecteinascidia Turbinata	FSCMRFIDETDCKLSVNNGSVNILSTSKMKTIFLPLDFAAESTRCRRMISRLQYDMVAINIR*KL*
JGI24022J15233_101080906	3300001539	Ecteinascidia Turbinata	MRFIDETDCKLSVSNRSVNVLCTSKMKTIFLLTLDFAAESTRGRGMISRLQYDRVAINIR
JGI24022J15233_101223081	3300001539	Ecteinascidia Turbinata	MRFIDETDKLSVGNGSDNVLSTSKMKTIFLLTLDFAAKSTRYSGMISRLQ*
JGI24022J15233_101539503	3300001539	Ecteinascidia Turbinata	MRFIDETDCNPAVSNGSDNVLSTSKIKTILLLRLDFAYEFARYISRMISRLQ*
JGI24022J15233_101698192	3300001539	Ecteinascidia Turbinata	MRFIDETDCKLSVSNGSVNVLSTSKMKTIFLLTLDFAAESTRCRGMI
JGI24022J15233_102132992	3300001539	Ecteinascidia Turbinata	MRFIDETDIDCKLSASKGSVNVLTTSKTKTIFLLTLDFAAETTRCRETISRLQ*
JGI24022J15233_102203691	3300001539	Ecteinascidia Turbinata	MRFIDETNCKLSVSNASVSVLSTSKMKTMFLLTLDFAAEITLQGMVSRLE*
JGI24159J19872_1000709519	3300001689	Ecteinascidia Turbinata	VRFIDKTDCXLSVSXGSVNVLSTSKIKNIILLAAESTRCRGMISSXQ*
JGI24159J19872_1000851411	3300001689	Ecteinascidia Turbinata	MHFIDETDCKLSGSNGSVNVLSTSKMKTIFLPTLGFAAETTRCGRMFSRLQ*
JGI24159J19872_100421522	3300001689	Ecteinascidia Turbinata	MRFIDKTDCKLSVSIGSVNVLSTSKIKNIFLLAAEPTRCMGMISSLQ*
JGI24159J19872_100504578	3300001689	Ecteinascidia Turbinata	MRFIDETVCKLSVNNNSVNVLSTCKMQTIFLLLDFAAESTRCRGMISRLQ*
JGI24159J19872_100596231	3300001689	Ecteinascidia Turbinata	MRFIDETDCKLSVSNDSVRVLSTSKMNTIFLLTLDFAAETTRWRGMISRLQ*
JGI24159J19872_100902501	3300001689	Ecteinascidia Turbinata	RFIDETDIDCKLSVSKGSVNVLSTSKMKTIFLXTLXFAADTTRXRGTISRLQQDRMATNIK*
JGI24159J19872_100907471	3300001689	Ecteinascidia Turbinata	IDEIDCKVCVSTGSVNVLSTSKMKTIFLLTLGFAAETTRCRGMISRFQ*
JGI24159J19872_100971797	3300001689	Ecteinascidia Turbinata	SCMRFIDETDCKLSVNNGSVNILSTSKMKTIFLPLDFAAESTRCRRMISRLQYDMVAINIR*
JGI24159J19872_100972294	3300001689	Ecteinascidia Turbinata	MRFIDETDCKLSVSNGSVSVLSTSKMKTIFLLTLDFAAETTCCREWFHIYSRVAINIR*KL*
JGI24159J19872_102554012	3300001689	Ecteinascidia Turbinata	SCMRFIDETDCKLSVNNGSVNILSTSKMKTIFVPFDFAAKSTRCRRLISRLQ*
JGI24159J19872_102612441	3300001689	Ecteinascidia Turbinata	MRFIDETDCKLSVNNGSVNILSTSKVKTIFLPLDFAAESTRCRRMIS
JGI24158J21664_1000281324	3300001913	Ecteinascidia Turbinata	MDETDCKLSVSNGSVNVLSTSKMKTIFPLTLDFAAETTRCRGTISLLQ*
JGI24158J21664_100030233	3300001913	Ecteinascidia Turbinata	MRVIDETDCKLSVCDNSVTVLSTSKIKTIFLLTLDFAAETTRCTGMISRLQ*
JGI24158J21664_1000791111	3300001913	Ecteinascidia Turbinata	MRFINETDIDCKLSVSNGSVNVLSTSKMKTIFLLTLDFAAETTRCRGTISRLQ*
JGI24158J21664_100144043	3300001913	Ecteinascidia Turbinata	MRFVDETDCKLSVSNGSVNVLSTSEMKTIFLLTLGFAAETTRYKGMISRLQ*
JGI24158J21664_1001611119	3300001913	Ecteinascidia Turbinata	MRFIDEIDCKLSVSNRSVNVLCTSKMKTIFLLTLDFAAESTRGRGLISRLQYDRVAISIR*KL*
JGI24158J21664_100186501	3300001913	Ecteinascidia Turbinata	MRFIDETDIDCKLSVSKGSVNVLSTSKMKTIFLLTLDFAAETTRCRGTFTVG*
JGI24158J21664_100332221	3300001913	Ecteinascidia Turbinata	MRFIDETDKLSVGNGSDNVLSTSKMKTIFLLTLDFAAKSTRYS
JGI24158J21664_100443885	3300001913	Ecteinascidia Turbinata	MRFIDETDCKLSVSNRSVNILRTSKMKTIFLLTLDFAAESTRCRGMISXLQ*
JGI24158J21664_100646225	3300001913	Ecteinascidia Turbinata	MRFIDETDIDCKLSVSNGSVNVLSTSKIKTIFLLTLDFAAETTRGRGTISH*
JGI24158J21664_100826203	3300001913	Ecteinascidia Turbinata	MRFIDETDCKLCVSTGRDNILSTSKMKTIFLFTLGFAAETTRCRGMISGLQ*
JGI24158J21664_100837653	3300001913	Ecteinascidia Turbinata	MRFIDETVCKLSVYNNSVNVLTASKMKTIFLLLDFAAESTRCRGMISRLH*
JGI24158J21664_100960677	3300001913	Ecteinascidia Turbinata	FSCMRFIDETDCKLSVNNGSVNILSTSKMKTIFLPLDFAAESTRCRRMISRLQYDMVAINIR*
JGI24158J21664_100998513	3300001913	Ecteinascidia Turbinata	MRFIDEMDCKLSVSDGSVNVPRTSKLKTIFLLKLDFAAESTRCGGMISRLQ*
JGI24158J21664_101227643	3300001913	Ecteinascidia Turbinata	MRFIDETDCNPAVSNGSDNVLSTSKIKTVLLLRLDFAYEFARYISRMISRLQ*
JGI24158J21664_101408852	3300001913	Ecteinascidia Turbinata	MGFIDETDCKLSVNNGSVNILSTSKMKTIFVPLDFAAESTRCRRMTSRLQ*
JGI24158J21664_101488542	3300001913	Ecteinascidia Turbinata	MRFIDEADCKLFVNNGSVNILSTSKMKTIFLPLDFAAESTRCRRMISRLQ*
JGI24158J21664_101812401	3300001913	Ecteinascidia Turbinata	MRFIDETDCKLSVNNGSVNILSTSKVKTIFLPLDFAAESTRCRRMISR
JGI24158J21664_102367522	3300001913	Ecteinascidia Turbinata	RFIDETDIDCKLSVSKGSVNVLSTSKMKTIFLLTLDFAADTTRCRGTISRLQQDRMATNIK*
Ga0210059_100073010	3300027611	Ecteinascidia Turbinata	MRFIDETDCKLSVSNGSVNVLSTSKMKTIFLLTLDFAAESTRCRGMISRLQ
Ga0210059_10012026	3300027611	Ecteinascidia Turbinata	MRFIDETDCKLSESDGSVNALSTYKIKKHLSTLDFAAGPSRYSRLTSNLL
Ga0210059_100259026	3300027611	Ecteinascidia Turbinata	MRFIDETDIDCKLSVSNGSVNVLSTSKLKTIFLLMLDFAADITRCRGTISRLQ
Ga0210059_100817912	3300027611	Ecteinascidia Turbinata	MRFIDEMDCKLSVSDGSVNVPRTSKLKTIFLLKLDFAAESTRCGGMISRLQ
Ga0210059_10084785	3300027611	Ecteinascidia Turbinata	MRFIDKTDCKLSVSSGSVNVLSTSKIKTIFLLTLDFAAEPARCIREMISNLQDRVAIDIR
Ga0210059_10099838	3300027611	Ecteinascidia Turbinata	MRFIDETDCKLSVSNRSVNVLCTSKMKTIFLLTLDFAAESTRGRGMISRLQYDRVAINIRXKL
Ga0210059_10124916	3300027611	Ecteinascidia Turbinata	MRFIDETNCNLSVNNDNVNLLSTSKMKTIFLLTLDFVAETARWRGMVSRLQ
Ga0210059_10193151	3300027611	Ecteinascidia Turbinata	MSFIDETDIDCKLSVSKGSVNVLSTSKMKTIFLLTLDFAAETTRCRGTISRLQ
Ga0210059_10260552	3300027611	Ecteinascidia Turbinata	MRFIDKTDCKLSVSNGSVTVLSTSKTENIFLHTLDFAAESTRCRGMNDFKFTV
Ga0210059_10297215	3300027611	Ecteinascidia Turbinata	MRFIDETDCKLSVSNDSVRVLSNSKMNTIFLLTLDFAAETTRWRGMISRLQ
Ga0210059_10310204	3300027611	Ecteinascidia Turbinata	MRFIDETDCKLSVSNGSVSVLSTSKMKTIFLHTLDFAAETTRCREWFHVYSRVAINIRXK
Ga0210059_10351964	3300027611	Ecteinascidia Turbinata	MRFIDETDCKLSVNNGSVNILSTSKMKTIFLPLDFAAESTRCRRMISRLQYDMVAINIR
Ga0210059_10357215	3300027611	Ecteinascidia Turbinata	MRFIDETDCKLSVNKGSVNILSTSKVKTIFLPLDFAAESTRCRRMISRLQ
Ga0210059_10461504	3300027611	Ecteinascidia Turbinata	MRFIDETVCKLSVNNGSVNVLSTSKMKTIFLLLDFATESTRCRGVISRLQ
Ga0210059_10468864	3300027611	Ecteinascidia Turbinata	MRFIDETVCKLSVYNNSVNVLSTSKMKTIFLLLDFAAESTRCRGMISRLH
Ga0210059_10575004	3300027611	Ecteinascidia Turbinata	MRFIDETDCKLSVSNDSVNALSTSKMKTIFLLTLDFAAETTRSRGMISHLQ
Ga0210059_10628395	3300027611	Ecteinascidia Turbinata	MRFIDETDCKLCVSTGSVIVFSTSKMKTIFLFTLGFAAETTRCRGMISRLQ
Ga0210059_10660371	3300027611	Ecteinascidia Turbinata	MRFSDEMDCKLSVSIGIVNVPKTSEMKTNFLLKLDFAAESARCRRMISRLQ
Ga0210059_10685451	3300027611	Ecteinascidia Turbinata	IDETDCKLSASNGSVNVLSTSKMKTIFLLTLGFAAETTRCKGMISRLQ
Ga0210059_10795251	3300027611	Ecteinascidia Turbinata	MRFIDETDCNPAVSNGSDNVLSTSKIKTILLLRLDFAYEFARYISRMISRLQ
Ga0210059_10841191	3300027611	Ecteinascidia Turbinata	MRFIDETDKLSVGNGSDNVLSTSKMKTIFLLTLDFAAKSTRYSGMISRLQ
Ga0210059_11356851	3300027611	Ecteinascidia Turbinata	MRLIDEADCKLFVNNGSVNILSTSKMKTIFLPLDFAAESTRYRRMISRLQ