Metagenome Family F106073

Overview

Basic Information

• Family ID: F106073
• Family Type: Metagenome
• Number of Sequences: 100
• Average Sequence Length: 41 residues
• Representative Sequence: MFKKEKAIWPGIIQQPVNALAGSRRIGVKTARPDVDYSSH
• Number of Associated Samples: 5
• Number of Associated Scaffolds: 100

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 0.00 %
• % of genes from short scaffolds (< 2000 bps): 0.00 %
• Associated GOLD sequencing projects: 4
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (99.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Tunicates → Ascidians → Unclassified → Unclassified → Ecteinascidia Turbinata (100.000 % of family members)
• Environment Ontology (ENVO): Unclassified (100.000 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal corpus (100.000 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 0.00%
  Coil/Unstructured: 100.00%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF00078	RVT_1	2.00
PF14291	DUF4371	1.00
PF07645	EGF_CA	1.00

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
All Organisms	root	All Organisms	1.00 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
cellular organisms	root	All Organisms → cellular organisms	1.00 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.00 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.00 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001463|JGI24021J15306_10037970	All Organisms → cellular organisms → Eukaryota → Opisthokonta	5339
3300001463|JGI24021J15306_10065699	Not Available	3342
3300001539|JGI24022J15233_10086058	Not Available	2664
3300001913|JGI24158J21664_10058693	Not Available	3527

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Class

Habitat	Taxonomy	Distribution
Tunicates	Host-Associated → Tunicates	100.00%

Category

Habitat	Taxonomy	Distribution
Ascidians	Host-Associated → Tunicates → Ascidians	100.00%

Type

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Tunicates → Ascidians → Unclassified	100.00%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Tunicates → Ascidians → Unclassified → Unclassified	100.00%

Habitat

Habitat	Taxonomy	Distribution
Ecteinascidia Turbinata	Host-Associated → Tunicates → Ascidians → Unclassified → Unclassified → Ecteinascidia Turbinata	100.00%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001463	Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 1	Host-Associated
3300001539	Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 2	Host-Associated
3300001689	Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 4	Host-Associated
3300001913	Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 3	Host-Associated
3300027611	Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 2 (SPAdes)	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24021J15306_1000087534	3300001463	Ecteinascidia Turbinata	MLRKKNAIWLDIIQQPVNAGSRRIGVKTARPGVDYRRH*
JGI24021J15306_100086301	3300001463	Ecteinascidia Turbinata	MFKKEKSYLAGIIQQPVNAGSHRIGVKTARPGVDYRPH*
JGI24021J15306_1002105013	3300001463	Ecteinascidia Turbinata	MFKKEKSYLAGIIQQPVNAGSRGIGVKTARPGVDYRPH*
JGI24021J15306_100230482	3300001463	Ecteinascidia Turbinata	MFKKEKSYLACIQQPVKALAGSRQIAIGMNTARPGVE*
JGI24021J15306_100232232	3300001463	Ecteinascidia Turbinata	MFKKEKSYLTGIIQQPVNAGSIRMGVKTARPGIDYRPH*
JGI24021J15306_100245533	3300001463	Ecteinascidia Turbinata	MFKKVKAIWPGIIQQPVNAGSRRIGVKTARPCVDYSIDDIKS*
JGI24021J15306_100248763	3300001463	Ecteinascidia Turbinata	LHIIFKKEKSYLAGIIQQPVNALAGSRRIGVKTARPGVDYSSH*
JGI24021J15306_1002868614	3300001463	Ecteinascidia Turbinata	MFKKNKALAIIQQPVNAFADTRRIDVKTARPGVDYSSH*
JGI24021J15306_1003610014	3300001463	Ecteinascidia Turbinata	MFKKEKAIWPGINQQPINAGSRRIGVKTARPGVDYRPH*
JGI24021J15306_100379703	3300001463	Ecteinascidia Turbinata	MKEKSIWSGIIQQPVNAHAGSRRIDVKTARPGVDYSSH*
JGI24021J15306_1003801411	3300001463	Ecteinascidia Turbinata	MFKKEKGIWSGIIQQAVNALAGSRRIGVKTARPGVDCSSH*
JGI24021J15306_100559414	3300001463	Ecteinascidia Turbinata	MFKKEKSYLPGIIQQPVNALASSHKIGMKTARPGVDYGYH*
JGI24021J15306_100618797	3300001463	Ecteinascidia Turbinata	MFKKEKSYSIWLCIIQQPVNALAGSRRIGLKTARPGVDYS
JGI24021J15306_100655815	3300001463	Ecteinascidia Turbinata	MSQYNFLRRKKAIWPGIIQQPVNAGSRRMGVKTARPGVDYRPH*
JGI24021J15306_100656994	3300001463	Ecteinascidia Turbinata	MFKKEKGYLAGIIQQPVNALAGSHRIGVKTARPGVDYSSH*
JGI24021J15306_100726126	3300001463	Ecteinascidia Turbinata	MFKKENAIWPGIIQQPVNALAGSRRIGVKTARPDVDYSSH*
JGI24021J15306_100733862	3300001463	Ecteinascidia Turbinata	MFKKEQSYNIWLCIIQQPVNALADSRRIGLKTVRPGVDYSSH*
JGI24021J15306_100882274	3300001463	Ecteinascidia Turbinata	LHVIFKKEKSYLACIQQLVKALAGSRRIGMKTARPGVE*
JGI24021J15306_100898152	3300001463	Ecteinascidia Turbinata	MFKKEKSYLTCGVIQQPVNALAGSRRIGVKTARPGEDYSSH*
JGI24021J15306_100916995	3300001463	Ecteinascidia Turbinata	MFKREKSYNIWLCIIQQPVNALVGTRIIGLKTAMPGVDYSSD*
JGI24021J15306_101005533	3300001463	Ecteinascidia Turbinata	MFKKEKSYLACIIQQPVDALAGSRRIGMTTARPGVDYSSH*
JGI24021J15306_101054145	3300001463	Ecteinascidia Turbinata	MLRIKKLFTKKKVICPGIIQQPVNARSRRIGVKTARPGVDYRPH*
JGI24021J15306_101180695	3300001463	Ecteinascidia Turbinata	VFNKEKSYSIWLCIIQQPVSALAGSRRIGLKTARPGVDYSSH*
JGI24021J15306_101297922	3300001463	Ecteinascidia Turbinata	MFKKENAIWPGIIQQPLNAGSRRIGVKTARPDVDYRRH*
JGI24021J15306_101467821	3300001463	Ecteinascidia Turbinata	MFKKEKSYSIWLCIIQQPVNALAGSRRIGLKTAKPGVDYSTH*
JGI24021J15306_101510362	3300001463	Ecteinascidia Turbinata	MFKKEKIYLPSIIQQPVNALAGSRRIGVKTARPGVDYSSH*
JGI24021J15306_101897491	3300001463	Ecteinascidia Turbinata	MFKKQKAIWPGIIQQPVNAFAGSRKIGVKTARPGVDYSSH*
JGI24021J15306_102021983	3300001463	Ecteinascidia Turbinata	MFKKEKSYRPGIIQQPVNALAGSRRIGVKTPRPGVETVNIKM
JGI24021J15306_102076142	3300001463	Ecteinascidia Turbinata	MFKKERSYSIWLCIIPQPVNALTGSRRIGLKTARPGVDYSSH*
JGI24021J15306_102116971	3300001463	Ecteinascidia Turbinata	MKEESYSNSLCIIQQPVNALAGTHRIGLKTARPGVGNG
JGI24021J15306_102445571	3300001463	Ecteinascidia Turbinata	EKSYSIWLCIIQQPVNALAGSRRIGLKTARLGVDYRPHFES*
JGI24021J15306_102530042	3300001463	Ecteinascidia Turbinata	MFKKGIWPGTITQQPVNAGSRGIGVKTAIPGVDFRTH*
JGI24021J15306_102535182	3300001463	Ecteinascidia Turbinata	MFKKEKSYRPGIIQQPANALGGSRKIGVKTARPGVDYSSH*
JGI24021J15306_102551412	3300001463	Ecteinascidia Turbinata	MFKKEKIYLTSIIQQPVNALAGSCRIGVKTARPGVDYSSH*
JGI24022J15233_1000015723	3300001539	Ecteinascidia Turbinata	VSQNNNNLHIMFKNKKAIWLGIIQQPVNALAGSRRIGVKTARPGVDCSSH*
JGI24022J15233_1000019635	3300001539	Ecteinascidia Turbinata	MFKKEKSYLTGGVIQQPVNALAGSRRIGVKTARPGVDYSSH*
JGI24022J15233_1000461819	3300001539	Ecteinascidia Turbinata	MFRKKKSILPGIIQQPVNALAGSRRIGMKTAWPGVDYSSQRARVPLLV*
JGI24022J15233_1001099012	3300001539	Ecteinascidia Turbinata	MFQKEKSYLAGIIQQPVNALAGSRRIRPGLDSSSQQKSQSYPASLNYRSQ*
JGI24022J15233_100496003	3300001539	Ecteinascidia Turbinata	MFKKEKGYLAGIIQQAVNALAGSRRIGVKTARPGVDCSSH*
JGI24022J15233_100599167	3300001539	Ecteinascidia Turbinata	MKEKSYLAGIIQQPVNAHAGSRRIDVKTARPGVDYSSH*
JGI24022J15233_100675051	3300001539	Ecteinascidia Turbinata	LHIIFKKEKAIWPGIIQQPVNAGSRRIGVKTARPGVDHSSH*
JGI24022J15233_100694104	3300001539	Ecteinascidia Turbinata	MFKKNKAIWPGINQQPINAGSRRIGVKTARPGVDYRPH*
JGI24022J15233_100796703	3300001539	Ecteinascidia Turbinata	MFKKEKSYRPGIIQQPVNAGSRRIGVKTAKARADYRPH*
JGI24022J15233_100821592	3300001539	Ecteinascidia Turbinata	MFKKENAIWPGIIQQPVNAGSRGIGVKTARPCVDYRRHYLRARVL*
JGI24022J15233_100854301	3300001539	Ecteinascidia Turbinata	LHIIFKKDKSYRPGIIQQPVNAGSRRIGVKTTKPGVDY*
JGI24022J15233_100860581	3300001539	Ecteinascidia Turbinata	MFKKEKASIWLGIIQQPVNALAGSRRIGLKTARPGVDYSSH*
JGI24022J15233_101019672	3300001539	Ecteinascidia Turbinata	MFKKEKSSIWSGIIQQPVNAGSRRRGVMIAKPAVDYRPH*
JGI24022J15233_101317092	3300001539	Ecteinascidia Turbinata	MFNPLRKKKAIWPGIIRQPVNALAGSRRIGMTTARPGVDYSSHKI*
JGI24022J15233_101379642	3300001539	Ecteinascidia Turbinata	MFKKKKAIWLGIIQQPVNALAGTRRINLKTARPGVDYSSH*
JGI24022J15233_101401774	3300001539	Ecteinascidia Turbinata	LHIIFKKEKNIWPGIIQQPANAGSRGIGVKTAKPCVDYRPH*
JGI24022J15233_101428611	3300001539	Ecteinascidia Turbinata	MFKKEKSYLAGIIQQPVNALAGSRRIGMTTARPGVDYSSHKKS*
JGI24022J15233_101467503	3300001539	Ecteinascidia Turbinata	MKKAIWPGNGIIQQPVNALAGSRRIGVKTARPVVDYSSH*
JGI24022J15233_101785651	3300001539	Ecteinascidia Turbinata	MFKKEKSIWPGIIQQPVNAGSHRTGLKTVMPDVDY
JGI24022J15233_101796542	3300001539	Ecteinascidia Turbinata	MFKKEKSYRPDIIQQSVNTGSRISIGVKTARPGVDYTPQ*
JGI24022J15233_101942432	3300001539	Ecteinascidia Turbinata	MSKKEKGISGLWPGIIQQPVNALAGSRRIGIKTA*
JGI24022J15233_102073021	3300001539	Ecteinascidia Turbinata	LRKKNAIWPGIIQQPVNAGSRRIGVKTAMPGVEFVDYRPH*
JGI24022J15233_102131461	3300001539	Ecteinascidia Turbinata	MFKQEKSYLAGIIQQPVNVGSHRTGLKTAMPDVDYRPH*
JGI24022J15233_102204243	3300001539	Ecteinascidia Turbinata	MFKKEKSYLWPGIIQQPVNALAGSRRIGMKTARPGVDYSSY*
JGI24022J15233_102395152	3300001539	Ecteinascidia Turbinata	MSKKEKAIWPGIIQQSVNAGSRRIGVKTARPSVDYSSH*
JGI24022J15233_102418651	3300001539	Ecteinascidia Turbinata	LHIIFKKEKSYRPGIIQQPAKAGSRRIGVKTAEPRVDYRPH*
JGI24022J15233_102464951	3300001539	Ecteinascidia Turbinata	KKEKSYSIWLCIIQQPVNALAGSRRIGLKTARLGVDYRPHFES*
JGI24022J15233_102495843	3300001539	Ecteinascidia Turbinata	MFKKEKSYLTGIIQQPANAASHRTGLKTVMPDVDYRQH*
JGI24159J19872_100047903	3300001689	Ecteinascidia Turbinata	LHIIFKKEKSYLACIIQQPVNALAGSRRIGVKTARPGVDYSSH*
JGI24159J19872_100165349	3300001689	Ecteinascidia Turbinata	MLHIMFKKEKSYRPGIIQQPVNAGSRRKGVKTARPG*
JGI24159J19872_1002918713	3300001689	Ecteinascidia Turbinata	MKQKNLHIMFKKKASDLVGIIQQPVNALAGSRRIGVKTASPGLDNSSH*
JGI24159J19872_100334055	3300001689	Ecteinascidia Turbinata	MFKKEKSYRHGIIQQPVNAGSRRIGVKTAMPGVDYRVTPH*
JGI24159J19872_100361026	3300001689	Ecteinascidia Turbinata	MFKKEKAIWPGIIQQPVNALAGSRRIGVKTARPDVDYSSH*
JGI24159J19872_100437996	3300001689	Ecteinascidia Turbinata	MFKKEKSYRPGINQQQVNAGSRRIGVKTARPGVDYRPH*
JGI24159J19872_100455105	3300001689	Ecteinascidia Turbinata	MLRKKNAIWPGIIQQPVNAGSRRIGVKTVKPGLDYRPHYGKRARVLC*
JGI24159J19872_100469538	3300001689	Ecteinascidia Turbinata	MSKKEKAIWPGIIQQPVNAGSRRIGVKTARPGVDYSSH*
JGI24159J19872_100479033	3300001689	Ecteinascidia Turbinata	MFKKEKSYRPGIIQQPANVGSGRIGVKAARLHVDCRPH*
JGI24159J19872_100492495	3300001689	Ecteinascidia Turbinata	MFKKEKASIWLGIIQQPVNALAGLRRIGLKTARPGVDYSSH*
JGI24159J19872_100586467	3300001689	Ecteinascidia Turbinata	MFKKEKSYSIWLCIIQQPVNALAGSRRIGLKTARPGVDYSS
JGI24159J19872_100641016	3300001689	Ecteinascidia Turbinata	MFKKEKRYRPGIIQQPVNALAGSGEYGVKTARPGVDYSSH*
JGI24159J19872_100734625	3300001689	Ecteinascidia Turbinata	MFKKEKSYSIWLCIIQQPVNALAGSRRIVLKTVRPGVDYSSH*
JGI24159J19872_100956283	3300001689	Ecteinascidia Turbinata	MFKKEKSYRPGIIQQPVNAGSHRTGLKTVMPDVDYRXH*
JGI24159J19872_101118033	3300001689	Ecteinascidia Turbinata	MFKKEKAIWPGIIQQPVNAGSRGIGVKTARPCVDYRRHYLRARVL*
JGI24159J19872_101577554	3300001689	Ecteinascidia Turbinata	VSQTTILHIIFKKEKSYRPGIIQQPANAGSRRIGVKTAKPGVDYRP
JGI24159J19872_101984403	3300001689	Ecteinascidia Turbinata	MFKQEKSYRPGIIQQPVNVASHRTGLKTAMPDVDYRPH*
JGI24159J19872_102501982	3300001689	Ecteinascidia Turbinata	MFKKGIWPGTITQQPVNAGSRGIGVKTARPGVDFRTH*
JGI24158J21664_1000929422	3300001913	Ecteinascidia Turbinata	MFKKEKSYRPGIIQQPVNAGSRGIGVKTARPGVDYRPH*
JGI24158J21664_1002524915	3300001913	Ecteinascidia Turbinata	MFKKEKSYLAGINQQQVNAGSRRIGVKTARPGVDYRPH*
JGI24158J21664_100405744	3300001913	Ecteinascidia Turbinata	MFRKKKSILPGIIQQPVNALAGSRRIGMKTAWPGVDYSSQKS*
JGI24158J21664_100455361	3300001913	Ecteinascidia Turbinata	MKQKNLHIMFKKKASDLVGYYQQPVNALAGSRRIGVKTASPGLDNSSH*
JGI24158J21664_100586931	3300001913	Ecteinascidia Turbinata	MFKKEKSYLACIIQQPVSALAGSREYGVKTARPGVDYSSH*
JGI24158J21664_100602827	3300001913	Ecteinascidia Turbinata	MFKKEKSYSIWLCIIQQPVNALAGSRRIGLKTARPGVDY
JGI24158J21664_100748552	3300001913	Ecteinascidia Turbinata	MFKKENAIWPGIIQQRLNAGSRRIGVKTARPDVDYRRH*
JGI24158J21664_100827304	3300001913	Ecteinascidia Turbinata	MLQIMLRKRKAIWPGIIQQPVNAGSRRIGEKTSKPGVDNRPH*
JGI24158J21664_100853545	3300001913	Ecteinascidia Turbinata	MFKREKSYNIWLCIIQQPVNALVGTRIIGLKTAMPGVDYSSN*
JGI24158J21664_100969972	3300001913	Ecteinascidia Turbinata	MFKKDKSYLAGIIKQPVNALAGSRRIGVKTARPGADYNSH*
JGI24158J21664_101174963	3300001913	Ecteinascidia Turbinata	MFRKKKAIWPGTIIQQPPVNELAGSRRIGVKTASPGVDYSSH*
JGI24158J21664_101187864	3300001913	Ecteinascidia Turbinata	MFKKEKSYPPGIIQQPVNAGSRRIGLKTAKPGVDYRPH*
JGI24158J21664_101241112	3300001913	Ecteinascidia Turbinata	MFKKEKGYRSGIIQQAVNALAGSRRIGVKTARPGVDYSSH*
JGI24158J21664_101256674	3300001913	Ecteinascidia Turbinata	SIWLCIIQQPVSALAGSHRIGLKTARPGIDYSSX*
JGI24158J21664_101499773	3300001913	Ecteinascidia Turbinata	LRIIFKKEKSYRPGIIQQPSNAGSCGIGVKTAKPGLDYRPH*
JGI24158J21664_101592632	3300001913	Ecteinascidia Turbinata	MFKKEKSYRPGIIQQPVNAGSHRTGLKTVMPDVDY
JGI24158J21664_101607392	3300001913	Ecteinascidia Turbinata	MFKKEKSYSIWLCIIQQPVNALAGSRRIGLKTARPGVDYSSH*
JGI24158J21664_102240783	3300001913	Ecteinascidia Turbinata	MDGPYHVGKKKAIWPGIIQQPVNAGSHRIGVKTARPGVDYR
Ga0210059_10269901	3300027611	Ecteinascidia Turbinata	MFKKEKSYLACIQQPVKALAGSRQIAIGMNTARPGVE
Ga0210059_10718162	3300027611	Ecteinascidia Turbinata	MFKKQKAIWPGIIQQPVNAFAGSRKIGVKTARPGVDYSSH