NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F106058

Metagenome Family F106058

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F106058
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 44 residues
Representative Sequence MQQRFLFADLIACSTCFGHHYAHHQEFKSIIPWLLLVVFFAV
Number of Associated Samples 9
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 1.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 6
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (99.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut
(100.000 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 83.33%    β-sheet: 0.00%    Coil/Unstructured: 16.67%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF13359DDE_Tnp_4 2.00
PF00078RVT_1 1.00
PF04218CENP-B_N 1.00



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.00 %
All OrganismsrootAll Organisms1.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002175|JGI20166J26741_10060383All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Rhinotermitidae → Coptotermitinae → Coptotermes → Coptotermes formosanus2776Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut100.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001544Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1Host-AssociatedOpen in IMG/M
3300002125Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4Host-AssociatedOpen in IMG/M
3300002175Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5Host-AssociatedOpen in IMG/M
3300002185Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1Host-AssociatedOpen in IMG/M
3300027558Cubitermes ugandensis crop segment gut microbial communities from Kakamega Forest, Kenya - Cu122C (SPAdes)Host-AssociatedOpen in IMG/M
3300027891Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4 (SPAdes)Host-AssociatedOpen in IMG/M
3300027904Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027960Cubitermes ugandensis midgut segment microbial communities from Kakamega Forest, Kenya - Cu122M (SPAdes)Host-AssociatedOpen in IMG/M
3300027984Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20163J15578_1030886513300001544Termite GutMQQSFFADLIACSTCFGHHYARHQELKSIIQWLLPV
JGI20163J15578_1048751333300001544Termite GutMQQRFLFADLIACSKCFGHHYAHHQELKSIIQWLLPVVFRAV
JGI20163J15578_1065667833300001544Termite GutMQQSFFFADLIACSTCFGYHYAHHQELKSIIQWLLPV
JGI20163J15578_1086008933300001544Termite GutMQQRFFADLIACSTCFGHHYAHHQELKSIMQWLLPVV
JGI20165J26630_1014834723300002125Termite GutMQRRFFADLIPCATCFGHHYAHHQELKSIIQWLLPVVFRAVV
JGI20165J26630_1024722413300002125Termite GutMQQRFLFADLIVCSTCFGHHYAHHQELKSIKPWLLPVVFGAVVFKLLVWCGAEG
JGI20165J26630_1033332313300002125Termite GutMPTRCNRGFLFADLIACLTCFGHHYVHLQELKRIIQWLLPVVFRAVVFKLL
JGI20165J26630_1058492923300002125Termite GutMQQRFLFADLIACSKCFGHHYAHHQELKSIIQWLLPVVFRAVVFQV
JGI20165J26630_1070128723300002125Termite GutMQQRFLFADLIACSTCLGHSYAHHQELKSIIQWLLPVVFRA
JGI20166J26741_1000903323300002175Termite GutMQQRFLFAELIACSTCFGHHYAHHQEFKSIIPWLLLVVFFAV
JGI20166J26741_1006038313300002175Termite GutMQQRFLFANLIACSTCFGHHYAHHQEFKSIIPWLLLVVFFA
JGI20166J26741_1006582323300002175Termite GutMQQRILFADLIACSTCFGHHYAPHQELKSIIQWLLPVVFRAV
JGI20166J26741_1010392523300002175Termite GutMQQRFLFADLIACSTCFGHHYAHHQDLKSIIQWLLPVVFRAVVFQVAGLVW
JGI20166J26741_1032539343300002175Termite GutMQQRFFADLIACSTCFGHHYAHHQELKSIIQWLLPVVF
JGI20166J26741_1039469413300002175Termite GutMQQRFLFADLIACSTFFGHHYAHHQELKSIIQWLLSVVF
JGI20166J26741_1117336113300002175Termite GutMQQRFFFFADLIACSTCFGHHYAHHQEFKSIIPWLLRVVF
JGI20166J26741_1124846113300002175Termite GutMQQSFFADLIACSTCFGHHYAHHQELKSIIQWLLPVV
JGI20166J26741_1149839713300002175Termite GutMQQRFLFADLIACSTCFGHHYAHNQELKSIIQWLLPVVFRAVVFSSSWSG
JGI20166J26741_1153318513300002175Termite GutMQQRFLFADPIVCSTCFGHHYAHHQEFKSIIQWLLRVVFFAVVFQ
JGI20166J26741_1154910813300002175Termite GutRFLFADLIACSTCFGHHYAHHQEFKSIIPWLLRMVFFAVVFQVAGLVWS*
JGI20166J26741_1156318633300002175Termite GutMQQRGFIADLIVCSTCFGHHYAHHQDLKSIIQWLLPVVFRAVVFK
JGI20166J26741_1159859213300002175Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSIIPWLLLVVFFAV
JGI20166J26741_1164283923300002175Termite GutMQQRYFFADLIACSTCFGHHYAHHQELKSIIQWLLPVV
JGI20166J26741_1187623523300002175Termite GutMQQRFLFADLIACSTCFGNHYAHHQEFKSIIPWLLLVVFFA
JGI20166J26741_1190224323300002175Termite GutMQQSFFFADLIACSTCFGHRYAHHQELKSIIQWLLRVVF
JGI20166J26741_1194714423300002175Termite GutMQQRLLFADLIACSTCFGHHYVHRQELKSIIQWLLPVVF
JGI20166J26741_1200815713300002175Termite GutMRQVFFADLIACSTCFGHHYAHHQELKSIIQWLLPVVF
JGI20166J26741_1204862123300002175Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSIIPWLLLVVFFAVVFQVAGL
JGI20166J26741_1206940323300002175Termite GutMQQRFLFADLIARSTCFGHHYAHHQEFKSIIPWLLRVVFFAVVFQ
JGI20166J26741_1218920013300002175Termite GutMQQKLLFADLIACSTCFGHHYAHHQEFKSIIPWLLLV
JGI20166J26741_1218944083300002175Termite GutMQQSFFADLIACSTCFGHHYAHHQELKSIIQWLMPVVF
JGI20166J26741_1225261313300002175Termite GutMQQRFLFADIIACSTCFGHHYAHHQEFKSIIPWLLLVVFFAV
JGI20163J26743_1037150123300002185Termite GutMQQRFLLQILLLAQHVSGTSYAHHQELKSIIQWLLPV
JGI20163J26743_1074765113300002185Termite GutIADLIACSTCFGHHYAHHQEFKSIIQWLLRVVFYALVFQVAGLVWS*
JGI20163J26743_1075780213300002185Termite GutMQQRFVFADLIACSTCFGHHYAHHQELKSIIQWLLPVVF
JGI20163J26743_1093330823300002185Termite GutMQQRFLFVDLIACSTCFGHHYAHHQEFKSIIPWLLLVVFFA
JGI20163J26743_1107434013300002185Termite GutMQQRFLFADLIACSTCFGHHYANHQEFKSIIPWLLRVVFFAVVFQVAGLVGAEGY
JGI20163J26743_1114479213300002185Termite GutMQQSFFADLIACSTCFGHHYAHHQELKSIIQWLMPVVFR
Ga0209531_1016438313300027558Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSIIQWLLRVVFFAVVFQ
Ga0209628_1011439643300027891Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSIIPWLLLVVFFAVVFQVAGLVWS
Ga0209628_1012661213300027891Termite GutMQQRFLFADPIVCSTCFGHHYAHHQEFKSIIQWLLRVVFFAVVFQV
Ga0209628_1012866523300027891Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSIIPWLLLVVFFAVVFQVAGLV
Ga0209628_1014159813300027891Termite GutMQQRFFADLIACSTCFGHHYAHHQELKSIIQWLLPVV
Ga0209628_1019137513300027891Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSIIPWLL
Ga0209628_1019249213300027891Termite GutMQQRYFFADLIACSTCFGHHYAHHQELKSIIQWLLPVVFRAVVFKLL
Ga0209628_1020577813300027891Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSIIPWLLCVVFFAVVFQVAGLV
Ga0209628_1030613613300027891Termite GutMQQRFLFADLIACSTCFGHHYAHHQELKSVTQWLLPV
Ga0209628_1040853733300027891Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSIKPWLLLVVFFAVVFQVAG
Ga0209628_1042463113300027891Termite GutMQQRFLFADLIPCSTCFGHHCAHHQEFKSIIPWLLRVVFFAVVFQVAGLVWS
Ga0209628_1042746513300027891Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSIIPWLLPVVFFAVVFQVAGLVWS
Ga0209628_1042791113300027891Termite GutMQQRFLFADLIACSACFGHHYAHHQELKSIIQWLLPVVFRAV
Ga0209628_1056726313300027891Termite GutMQQRFFADLIACSTCFRHHYAHHQELKSIIQWLLPVVFRAVVFKLLV
Ga0209628_1060377613300027891Termite GutMQQRFLFADLIACSTCFGHHYAHHQELKSIIQWLLP
Ga0209628_1063846513300027891Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSIIPWLLRVVFFA
Ga0209628_1065724823300027891Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSITPWLLRVVFFAVVFQVA
Ga0209628_1070994913300027891Termite GutMQQRFFADLIACSTCFGHHYAHHQELKSIMQWLLPVVFRPVVFKLLVWCGAEG
Ga0209628_1079947413300027891Termite GutMQQSFFFADLIACSTCFGHHYAHHQELKSIIQWLLPVVF
Ga0209628_1114885613300027891Termite GutMQQRFLFADLVACSTCFGHHYAHHQEFKSIIPWLLLVVFFAVVFQ
Ga0209628_1133018723300027891Termite GutMQQRFLFADLTACSTCFGHHYAHHQEFKSIIPWLLLVVFFAVV
Ga0209628_1142289813300027891Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSIIPWLLLVVFFA
Ga0209737_1007153153300027904Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSIIPWLLR
Ga0209737_1015904723300027904Termite GutMQQRFLFADLIACSTYFGHHYAHHQEFKSIIPWLLLVVFFAVVFQVAG
Ga0209737_1018736413300027904Termite GutMPTRCNRGFLFADLIACLTCFGHHYVHLQELKRIIQWLLPVVFRAVVFKLLVWCGAEGYV
Ga0209737_1027212813300027904Termite GutMQQRFLFADLIACSACFGHHYAHHQEFKSIIPWLLLVVFFAVVFQVAGL
Ga0209737_1033464823300027904Termite GutMQQRFLFADLIACSTCFGHHYAHHQELKSIIPWLLLVVFFAVVFQVAGLVWSWGLC
Ga0209737_1038189533300027904Termite GutMPTRCNRGFLFADLIACSTCFGHHYAHHQEFKSIIPWLLLVVFFAVVFQV
Ga0209737_1038229013300027904Termite GutMQQTFLFADLIACSTCFGHHYVHHQEFKSIIPWLLRVVIFAV
Ga0209737_1043617323300027904Termite GutMQQRFFADLIACSTCFGHHYAHHQELKSIIQWLLRVVFFAVVFQVAG
Ga0209737_1044684913300027904Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSIIPWLLLV
Ga0209737_1046687823300027904Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSIIPWLLLVVF
Ga0209737_1061743013300027904Termite GutMQQRFLFADLIACSKCFGHHYAHHQEFKSIIPWLLLVVFLLWF
Ga0209737_1079181013300027904Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSIIPWLLRVVFFAVVFQVAGLVW
Ga0209737_1084424213300027904Termite GutMQQRFLFADLIACSTCFGHHHAHHQELKSIIPWLLLVVFFAVVFQVA
Ga0209737_1085418023300027904Termite GutMQQSFFFADLIACSTCFGHHYAHHQELKSIIQWLLPVVFR
Ga0209737_1094730313300027904Termite GutMQQRFLSDLIACSTCFGHHYAHHQEFKSIIQWLLRVVFCAVVF
Ga0209737_1105739013300027904Termite GutMQQRLLFADLIACSTCFGHHYAHHQEFKSIIPWLLL
Ga0209737_1147879613300027904Termite GutMQQSFFFADLIACSTCFGHNYAHHQELKSIIQWLLPVVFRAVL
Ga0209627_104343913300027960Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSIIPWLLRV
Ga0209627_122820113300027960Termite GutMQQRFLFADLIACSACFGHHYAHHQELKSIIQWLLPVVF
Ga0209629_1000099973300027984Termite GutMQQRFLFADIIACSTCFGHHYAHHQEFKSIIPWLLLVVFFAVVFQVAGLVWS
Ga0209629_1010429243300027984Termite GutMPTRCNRGFYFADLIACSTCFGHHYAHHQEFKSIIPWLLLVVFFAVVFQVAG
Ga0209629_1013374313300027984Termite GutMQQRFFADLIACSTCFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLV
Ga0209629_1019911513300027984Termite GutMQQMISFFADLIACSTCIGHHYAHHQELKIIIQWL
Ga0209629_1023724613300027984Termite GutMQQRFLFADLIACSTCFGHHYAHHQEFKSIIPWLLCVVFFAVVFQVAGLVWS
Ga0209629_1025010513300027984Termite GutMQQRFFSDLIACSTCFGHHYTHHQELKIIIQWLLPVVFRAVVFTLLVWC
Ga0209629_1027085313300027984Termite GutMQQRFLFADLIACSTCFEHHYAHHQEFKSIIPWLLRVVFFAVVFQVAG
Ga0209629_1032262613300027984Termite GutMQQRLLFADLIACSTCFGHHYAHHQELKSIIQWLLRVVF
Ga0209629_1038845713300027984Termite GutMQQSFFFADLIACSTCFGHHYAHHQELKSIIQWLLR
Ga0209629_1047275513300027984Termite GutMQQRFLFADLIACSTCFGHHYAHNQELKSIIQWLLPVVFRAVVFQVAGL
Ga0209629_1050729013300027984Termite GutMQQVFFADLIACSTCFGHHYAHHQELKSIIQWLLSVVFRAVVFKLLV
Ga0209629_1052301313300027984Termite GutMQQKFLFADLIACSTCFGHHYAHHQEFKSIIPWLLLVVFFAVVFQ
Ga0209629_1056622313300027984Termite GutMQQRFLFSDLIACSTCFGHHYAHHQEFKSIIPWLLLVVFFAVVFQVA
Ga0209629_1060560923300027984Termite GutMRQVFFADLIACSTCFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLV
Ga0209629_1062680113300027984Termite GutMQQRFLFADLITCSTCFGHHYAHHQELKSIIQWLLPVVF
Ga0209629_1065481713300027984Termite GutMQQRFLFADLIACSKCFGHHYAHHQELKSIIQWLLPVVFRAVVFQ
Ga0209629_1066884913300027984Termite GutMQQKLLFADLIACSTCFGHHYAHHQEFKSIIPWLLLVVFFAVA
Ga0209629_1075930513300027984Termite GutMQQRFFADLIACSTCFRHHYAHHQELKSIIQWLLRVVFCAVVF
Ga0209629_1083633713300027984Termite GutMQQRFLFADLVACSTCFGHHYAHHQEFKSIIPWLLLVVFFAVVFQVAGLVWS
Ga0209629_1086921813300027984Termite GutMQQRFFADLIACSTCFGHHYAHHQELKSIMQWLLPVAFRAVVFKLLVW
Ga0209629_1103118713300027984Termite GutMQQRFSFADLTACSTCFGHHYAHHQEFKSIIPWLLLVVFFAVVFQVAGLV


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