NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F106027

Metagenome Family F106027

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F106027
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 55 residues
Representative Sequence VAKALGGSFKLVMLAPRTVREMTQLLRGVFLANHLASNDNLTRTTKRQNTYNEN
Number of Associated Samples 7
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 4
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms Symbiont
(80.000 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.12%    β-sheet: 0.00%    Coil/Unstructured: 54.88%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00078RVT_1 1.00
PF00503G-alpha 1.00
PF00075RNase_H 1.00
PF08954Trimer_CC 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG2319WD40 repeatGeneral function prediction only [R] 1.00


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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Marine Gutless Worms SymbiontHost-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms Symbiont80.00%
Marine Gutless Worms SymbiontHost-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont20.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003810Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius ilvae ELBA.2Host-AssociatedOpen in IMG/M
3300003985Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius ilvae ELBA.1Host-AssociatedOpen in IMG/M
3300004144Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius ilvae PIANOSA.1 (version 2)Host-AssociatedOpen in IMG/M
3300004264Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius ilvae PIANOSA.2Host-AssociatedOpen in IMG/M
3300004632Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius ilvae PIANOSA.1Host-AssociatedOpen in IMG/M
3300027599Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius ilvae ELBA.2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027615Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius ilvae ELBA.1 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0056113_101074613300003810Marine Gutless Worms SymbiontSFKLVTLAPKTVREMTQLLRGVFLANHLASNYNLTRTIKRQHIQ*
Ga0056112_100079813300003985Marine Gutless Worms SymbiontVDVAKALGGSFKFVTLAPRTVREMTQLLRGVFLANNLASNDNLTGTTKRQTTHTMKLTIHKKXP*
Ga0066189_1014365913300004144Marine Gutless Worms SymbiontALEGSFKLVTLAPRTVREMTQPLRGIFRANHLSSNDNLTRTTKRQNIYNKD*
Ga0049108_1035302223300004264Marine Gutless Worms SymbiontGSFKLVTLAPRTVREMTQLLRGIFLANHLASNDDLTRTTKRQNTYNEN*
Ga0049107_1000107813300004632Marine Gutless Worms SymbiontLVTLAPRTVRKMTQLLRGVFLANHLASNDNLTRTTKRQNTYNEN*
Ga0049107_1000214213300004632Marine Gutless Worms SymbiontMELAPNPRHSGGAKALGVSFKLVTLAPRTVREMTQLLRGVFLANHLASNDNLTRPTKRLNTYNEN*
Ga0049107_1000371913300004632Marine Gutless Worms SymbiontHIIVEVAKALGGSFKLVTLAPRTVREMTQLLRGVFLANNLTRNDNLTRTTKRQNTYNEN*
Ga0049107_1000830673300004632Marine Gutless Worms SymbiontMELAPNPHYIGGAKALGGSFKVVMLAPRTVREMTQLLRGVYLANHLASNDNLTRTTKRQNTYNEN*
Ga0049107_1001389643300004632Marine Gutless Worms SymbiontVEVAKALGGSFKLVTLAPRTVSEMTQLLRGDFIAKHMASNDNLTRTTKRQNTYNEN*
Ga0049107_1001504113300004632Marine Gutless Worms SymbiontLAPRTVREMTQLLRGVFLANHLASNDNLTRTTKRQNTYNEH*
Ga0049107_1002055713300004632Marine Gutless Worms SymbiontIIVEVAKALGGSFKLVTLAPRTVREMTQLLRGVFLANHLALASTDNLTRTTKRQHT*
Ga0049107_1003276813300004632Marine Gutless Worms SymbiontVEVAKALGGSFKLVKLAPKTVREMTQLLRGVFLANHLASNDNLTRTTKRQNTYNEN*
Ga0049107_1003550043300004632Marine Gutless Worms SymbiontVEVAKALGGSFKLVMLAPRTVREMTQLLREDFLANHLASNDNLTRTTKRQNTYNEN*
Ga0049107_1003795583300004632Marine Gutless Worms SymbiontGGSFKLVTLAPRTVREMTQLLRGVFLANHLASNDNLTRTTKRQNTYSEN*
Ga0049107_1003889713300004632Marine Gutless Worms SymbiontEVAKALGGSFKLVTLAPRTVREMTQLLRGVFLANHLANNGGPFLTRTTARQNTYNEN*
Ga0049107_1004289913300004632Marine Gutless Worms SymbiontVEVAKALGGSFRLVTLAPRTVREMTQLLRGVFLANHLASNDKLTRTTKRQN
Ga0049107_1005925043300004632Marine Gutless Worms SymbiontMLAPRTVREMTQLLRGVFLANHLASNDNLTRTTKRQNTYNEN*
Ga0049107_1006060313300004632Marine Gutless Worms SymbiontHVIVEVAKALGGSFKLVTLAPRTVREMTQLLRGVFLANHLASNDNLTRTTKRQKKYNEN*
Ga0049107_1006154923300004632Marine Gutless Worms SymbiontMEVAKALGGSFKLVTLAPRTVREMTHLLRGVVLANNLASNDNLTRTTKRQNTYNEN*
Ga0049107_1006333973300004632Marine Gutless Worms SymbiontLLTHIIVEVAKALGGSFKLVTLAPKTVREMTQLLRGVFLVNNLASNDNLTRTTKRQTIHTMKTNST*
Ga0049107_1008880313300004632Marine Gutless Worms SymbiontMELTHIIVEVAKALGGSCKLVTLAPRTVREMTQLLRGVFLANHLANNDNLTRTTKRQNTYNEN*
Ga0049107_1009098243300004632Marine Gutless Worms SymbiontPALLLFTTAQKGWNYLLTHIIVEVAKALGGSFKLVTLAPRTVREMTQLLRVVFLANHLASNDNLTRTTKRQNTYNEN*
Ga0049107_1009133113300004632Marine Gutless Worms SymbiontMELALTHIIVEVAKALGGSFKLVALVPRTVREMTQLLRGVFLANHLASNDSLTRTTKRQNTYNEN*
Ga0049107_1009637643300004632Marine Gutless Worms SymbiontKLVTLAPRTVREMTQLLRGVFLANHLASNDNLTRTTKRQNAYNEN*
Ga0049107_1011140013300004632Marine Gutless Worms SymbiontKALGGLFKLVTLAPRTVREMTQLLRGVFLANHLASNDNLIRTTRRQNTYNEN*
Ga0049107_1011520313300004632Marine Gutless Worms SymbiontQKGWNELLTHIIVEVAKALGGSFKLVTLAPKTVREMSQLLRGVFLANNLASNDNKTRTTKRQNTYNEN*
Ga0049107_1011839913300004632Marine Gutless Worms SymbiontLVTLAPRTVREMTQLLRGVFLANHLANNDNLTRTTKKKQNAYNEN*
Ga0049107_1013029723300004632Marine Gutless Worms SymbiontMELAPNPHYCIVEVAKALGGSFKLVTLVPRTVMEMTQLLRGVFLANHLANNDNLTRTTKGQNTYNDKKLR*
Ga0049107_1013300813300004632Marine Gutless Worms SymbiontKALGGSFKLVTLAPRTVREMTQLLRGVFLANHLASNDNLTRTTKRQHI*
Ga0049107_1013446913300004632Marine Gutless Worms SymbiontTHIIVEVAKALGGSFKLVMLAPRTVREMTQLLRGVFLANHLARNDNLTRTTKRLKTYNEN
Ga0049107_1014669033300004632Marine Gutless Worms SymbiontSFKLVTLAPRTVREMTQLLRGIFLANHLASNDNLTRTTNRQNTYNEN*
Ga0049107_1014751313300004632Marine Gutless Worms SymbiontMEVAKALGDSFKLVKLAPKTVREMTQLLRGVFLANNLASNDNKTRKTKRQNMHIQ*
Ga0049107_1015728633300004632Marine Gutless Worms SymbiontMVEVAKTLGGSFKLVTLVPRTVREMTQLLRGVFLANHLPSNDNLTRTTKRQNTYNEN*
Ga0049107_1015729533300004632Marine Gutless Worms SymbiontLVMLAPRTVREMTQLLRGVFLANHLASNDNLTRTTKRQNTHNEN*
Ga0049107_1015862733300004632Marine Gutless Worms SymbiontMEVAKALGGSFKLVTLAPRTVREMTQVLRGVFLANHLASNDNLTRTTKRQNTYNEK*
Ga0049107_1016106023300004632Marine Gutless Worms SymbiontMEVTKALGGSFKLVTLAPRTVREMTQRLIGVFLANHLASNDNLTRTTKRQNTYNEN*
Ga0049107_1016573123300004632Marine Gutless Worms SymbiontVEVAKALGGSFKLVTLAPRTVREMTQLLRGVFLANHLASNDNLTITTKKQNTYNEN*
Ga0049107_1016686413300004632Marine Gutless Worms SymbiontMELAPIYIIVEVAKALEGSFKLVTLAPRTVREMTQLLRGVFLANHLANNDNLTRTTKRQKTYNETNNT*
Ga0049107_1019365123300004632Marine Gutless Worms SymbiontSFKLVTLAPRTVREMTQLLRGVFLANHLASNDNLTRTTKRQNTYNEN*
Ga0049107_1019466013300004632Marine Gutless Worms SymbiontMVEVAKALGGSFKLVMLAPRTVREMTQLLRGVFLANHLASDDNLTRTTKRQNTYNEN*
Ga0049107_1019557713300004632Marine Gutless Worms SymbiontMKLAPNPLYSGGGSFKLVMLVPRTVRKMTQLLRGVILANHLASNDNLTRTTKRQNTYNEN
Ga0049107_1019997923300004632Marine Gutless Worms SymbiontMELAPEFLTHIIVEVAKALGVGCSFKLVTLAPRTVREMTQLLRGVFLANHLASNDNLTRTTK
Ga0049107_1020806613300004632Marine Gutless Worms SymbiontMELTHIIVEVAKALGGSFKLVTLAPRAVREMTQLLRGVFLANHLASNDNLTRTNKRQNTYNEH*
Ga0049107_1022659523300004632Marine Gutless Worms SymbiontVPITVVEVAKALGGSFKLVTLAPRTVREMTQLLRGIFLANHLANNDNLSRTTKRQNTYNEN*
Ga0049107_1023688333300004632Marine Gutless Worms SymbiontKLVMLAPRTVREMTQLLRGVFLANNLASNDNLTRTTKRQNTHTQ*
Ga0049107_1024281313300004632Marine Gutless Worms SymbiontAKALGGSFKLVTLAPRTVREMTQLLRGVFLANHLASNDNLSRTTKRQNTYNEN*
Ga0049107_1026760733300004632Marine Gutless Worms SymbiontVEVAKALGCSFKLVTLAPRTVREMTQLLRGVFLANHLANNDNLTRTT
Ga0049107_1028005223300004632Marine Gutless Worms SymbiontMELAPNPRYSGGIAKALGSSIKLVTLAPRTVREMTQLLRGVFLANHLASNDNLTRTTKRQNTYNEN*
Ga0049107_1028453523300004632Marine Gutless Worms SymbiontMEVAKALGGSFKLVMLVPKTVREMTQLLRGVFLANHLASNDNLTKTTKRQNTYNEN*
Ga0049107_1028607313300004632Marine Gutless Worms SymbiontMEVAKDLGGSFKLVTLAPRTVREMTQLLRGVFLANHLARNDNLTRTTKRQNTHNEN*
Ga0049107_1028630033300004632Marine Gutless Worms SymbiontVEVAKALGGSFKLVTLMPKTVREMTQLLRGVFLANHLASNDNLSRTTKRQTTHTMKTNNT
Ga0049107_1029217523300004632Marine Gutless Worms SymbiontLLTHIIVEVAKALGGSFKLVTLAPRTVREMTQLLRGVFLDNHLASNDNLTRTTKRQNTYNEN*
Ga0049107_1029235913300004632Marine Gutless Worms SymbiontIIVEVAKALGGSFKLDANVKNCKGDDSLLRGVFLANNLANNDNLTRTTKRQNTYNEN*
Ga0049107_1029936013300004632Marine Gutless Worms SymbiontGGSFKLVTLAPRTVREMTQLLRGVFLANHLASNDNLTRTIQRQNTYNEN*
Ga0049107_1030567613300004632Marine Gutless Worms SymbiontKLVTLAPRTVREMTQLLRGVFLANHLASNDNLTRTTKRQNIYNEN*
Ga0049107_1033801213300004632Marine Gutless Worms SymbiontAKALGGSFKLVTLAPRTVREMTQLLRGVFLANHLARNDNLTRTTKRQNMKTNNT*
Ga0049107_1034079013300004632Marine Gutless Worms SymbiontMVEVAKALGGSLKLVTLAPKTVREMTQLLRGVFLANHLASNDNLTRTTKRQ
Ga0049107_1034249623300004632Marine Gutless Worms SymbiontMEVAKALGGSFKLVTLAPRTVREMTQLLRGVFLDNHLATNDNLTRTTKRQNTYNEN*
Ga0049107_1034885723300004632Marine Gutless Worms SymbiontMAQKGWNSLLTHIVVEVAKALGGTFKLVTLAPRTVREMTQLLRGVFVANHLASNDNLTRTTKRQNTYNEN*
Ga0049107_1035424713300004632Marine Gutless Worms SymbiontMELAPNPHYSGGAKALGGSFKLVTLAPKTVREITQLLRGVFLANNLASNDNKTKTTKRQNTYNEN*
Ga0049107_1037320013300004632Marine Gutless Worms SymbiontVEVAKALGGSFKLVTLAPRTVRKMTQLLRGVFLANHLASNDNLTRTTKRQ
Ga0049107_1037463023300004632Marine Gutless Worms SymbiontVEVVKALGGLFKLVTLAPKTVREMTQLLRGANNLASNDNLTRTTKRQNTYNEN*
Ga0049107_1040296713300004632Marine Gutless Worms SymbiontAHIIVEVAKALGGLYKLVMLAPRTVREMTQLLRGVFLANHLASNDNLTRTTKRQNTYNEN
Ga0049107_1041268223300004632Marine Gutless Worms SymbiontVEVAKALGGSFKLVTLAPRTVREMTQLLRGVFLANHLASNDNLTRTT
Ga0049107_1041346613300004632Marine Gutless Worms SymbiontALGGSFKLVTLAPRTVREMTQLLRGVFLANHLASNDNLTRARQNTYNEN*
Ga0049107_1042970713300004632Marine Gutless Worms SymbiontVEVAKALGGSFELGTLAPKTVREMTQLLRGVFLANHLANNDNLTGTTKRQNTYNEN*
Ga0049107_1044119413300004632Marine Gutless Worms SymbiontMELAPNPHYSGGAKALTGLFKLVTLAPRTVREMTQLLRGVFLVNHLASNDNLTRTTKRQNIYNEN*
Ga0049107_1044412333300004632Marine Gutless Worms SymbiontLAPNPYYSGGAKALGGSFKLVTLAPRTVREMTQLLRGVFLANHLASNDNLTRTTKRQNTYNEN*
Ga0049107_1044960723300004632Marine Gutless Worms SymbiontVTLAPRTVREMTQLLRGVFLANHLASNDNLTRTTKRQNTYNEN*
Ga0049107_1048676823300004632Marine Gutless Worms SymbiontALGGSFKLVTLAPRTVREMTQLLRGVFLANNLASNDNLTKTTKRQNTYNEN*
Ga0049107_1048724523300004632Marine Gutless Worms SymbiontKGWKWLLTHIIVEVAKALGGSFKLVTLAPRTVREMTQLLIGAFLANHLTTNDNLTRTTKTQNT*
Ga0049107_1048952823300004632Marine Gutless Worms SymbiontIVEVAKALGGSFKLVTLAPRTVREMTQLLRGVFLANHLASNDNFTRTTKRQNTYNEN*
Ga0049107_1049335823300004632Marine Gutless Worms SymbiontLLTHIIVEVAKALGGSFKLVTLAPRTVREMTQLLRGVFLVNHLASNDN*
Ga0049107_1049375833300004632Marine Gutless Worms SymbiontEVAKALGGSFKLVTLAPRTVREMTQLLRGVFLANNLASNEYLIRTTRRQNTYNEN*
Ga0049107_1049823923300004632Marine Gutless Worms SymbiontKGWKWLLTHIIVEVAKALGGSFKLVTLAPRTVREMTQLLRGAFLANHLATNDNLTRTTKTQNTYNEN*
Ga0049107_1050530313300004632Marine Gutless Worms SymbiontLVTLAPRTVREMTQLLRGVFLANHLASNDNLTRTTKRQNT*
Ga0049107_1051784213300004632Marine Gutless Worms SymbiontEVAKALGGSFKLVTLAPRTVREMTQLLRGVFLANNLASNGNLTRTTKRQKTYNEN*
Ga0049107_1052002213300004632Marine Gutless Worms SymbiontVEVAKALAGSFKLVMLASRTVREMTQLLRGVFLANHLARNDNLTRTTKRQNTYNEN*
Ga0049107_1054202213300004632Marine Gutless Worms SymbiontHIIVEVAKALGGSFKLVTLVPRTVREMTQLLRGVFLANHFASNDNLTKTTKRQNTYNEN*
Ga0049107_1058006513300004632Marine Gutless Worms SymbiontVEIAKALGGSFKIVTLAPITVRKMTQLLRGVFLANHLASTDNLTRTTKRQNT
Ga0049107_1060870413300004632Marine Gutless Worms SymbiontGSFKLLKLAPRTVREMIHLLKWVFLANNLASNDNLTRTTKRQNTYNEN*
Ga0049107_1063486613300004632Marine Gutless Worms SymbiontLGGSFKLVTLAPRTVREMTQLLRGVFLANHLASNDNLTRKTKSKNTNDEN*
Ga0209786_105167313300027599Marine Gutless Worms SymbiontVTLAPKTVREMTQLLRGVFLANHLASNDNLTRTTKRQNT
Ga0209786_107470013300027599Marine Gutless Worms SymbiontLVTLAPRTVREMTEMLTGVFLANHLASNDNLTRTTKRQNTYNEN
Ga0209786_118658013300027599Marine Gutless Worms SymbiontMEVAKALGGSFKLVMLVPKTVREMTQLLRGVFLANHLASNDNLTKTTKRQNTYNEN
Ga0209786_121500613300027599Marine Gutless Worms SymbiontLGGSFKLVTLAPRTVREMTQLLRGVFLANHLASNDNLTRSTKRQNTYNEN
Ga0209786_121650913300027599Marine Gutless Worms SymbiontREMTQLLRGVFLANHLASNDNLTRTTKRQNTYNEN
Ga0209786_136686213300027599Marine Gutless Worms SymbiontVAKSLGGSFKLVTLAPRTVREMTQLLRGVFLANHLASNDNLTKTTKRQNT
Ga0209786_137990813300027599Marine Gutless Worms SymbiontLTHIIVEVAKALGGSFKLVSLAPKTVREMTQLLRGVFLVNNLASNDNKTRTTKRQNTYNE
Ga0209678_100133913300027615Marine Gutless Worms SymbiontVVEVAKALGGSFKLVTLAPRTVREMTQLLRGVFLANHLANNGGPFLTRTTARQNTYNEN
Ga0209678_102022213300027615Marine Gutless Worms SymbiontLTHVIMEIAKALGGSFKLVTLAPRTVREMTQLLRGVFLANHLARNDNLTRTTKRQNMKTNNT
Ga0209678_102768323300027615Marine Gutless Worms SymbiontVAKALVGSFKLVTLAPRTVREMTQLLRAAFLANHLASNDNLTRTTKRQNTYNEN
Ga0209678_109979623300027615Marine Gutless Worms SymbiontDGTLLTHIIVEVAKALRGSFKLVTLAPRTVREMTQLLREVFLANHLASNDNLTKTTKRQNTYNEN
Ga0209678_110280923300027615Marine Gutless Worms SymbiontVAKALGGSFKLVTLAPRTVRETTQLLRGVFLANHLASNDNLTGTTKRQNTYNEN
Ga0209678_122211613300027615Marine Gutless Worms SymbiontVAKALGGSFKLVMLAPRTVREMTQLLRGVFLANHLASNDNLTRTTKRQNTYNEN
Ga0209678_123938413300027615Marine Gutless Worms SymbiontTAQKGWKLLLTHIIVEVAKALGGSFKLVTLAPRTVMEMTQLLRGVFLANHLARNDNLTRTTKRQNTYNEN
Ga0209678_126024513300027615Marine Gutless Worms SymbiontRTVREMIQLLRGVFLANHLASNDNLTRTTKTQNIHNEN
Ga0209678_128087913300027615Marine Gutless Worms SymbiontTLAPRTVREMTQLLRGVFLANHLASNDNLTRTTKRQNTYNEN
Ga0209678_129364513300027615Marine Gutless Worms SymbiontHIIVKVAKALGGLFKLVTLAPRTVREMTQLLRGFFLSNHLASNDNLTRTTKRQNTFNEN
Ga0209678_134425813300027615Marine Gutless Worms SymbiontMELTHIIVEVAKALGGSCKLVTLAPRTVREMTQLLRGVFLANHLANNDNLTRTTKRQNTYNEN


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