Basic Information | |
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Family ID | F105999 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 100 |
Average Sequence Length | 44 residues |
Representative Sequence | MKCDEIRERMPDVAAGFSEPTADEGQHLASCGECAEHLKAMR |
Number of Associated Samples | 91 |
Number of Associated Scaffolds | 100 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 0.00 % |
% of genes from short scaffolds (< 2000 bps) | 0.00 % |
Associated GOLD sequencing projects | 85 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.62 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (100.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (12.000 % of family members) |
Environment Ontology (ENVO) | Unclassified (27.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (54.000 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 44.29% β-sheet: 0.00% Coil/Unstructured: 55.71% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.62 |
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Visualization |
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Watersheds Peatland Bog Forest Soil Bog Peatland Freshwater Sediment Iron-Sulfur Acid Spring Watersheds Soil Soil Vadose Zone Soil Tropical Forest Soil Bulk Soil Grasslands Soil Surface Soil Peatlands Soil Soil Soil Soil Hardwood Forest Soil Soil Untreated Peat Soil Rice Paddy Soil Peatland Tropical Peatland Permafrost Tropical Forest Soil Forest Soil Soil Corn, Switchgrass And Miscanthus Rhizosphere Soil Palsa Peat Soil Corn Rhizosphere Corn Rhizosphere Rhizosphere |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI12635J15846_103794162 | 3300001593 | Forest Soil | MKCNEVRERMPDVAAGFNEPTTDEGKHLESCGECAE |
Ga0062384_1006400541 | 3300004082 | Bog Forest Soil | MKCNCDEIRERMPEVAAGFDAPTADENEHLADCTACAEKLKEMRATMALLDE |
Ga0062389_1039877222 | 3300004092 | Bog Forest Soil | MKCDEVRERMPDVAAGLSQATTEESRHLSGCTGCAGQLEEFRRTMA |
Ga0058891_14540641 | 3300004104 | Forest Soil | MKCEEIRERVLDVAAGRSEPTKEESTHLASCTACAQQWKS |
Ga0058897_111447512 | 3300004139 | Forest Soil | MKCEEIRERVLDVAAGRSEPTKEESAHLASCDACALQLKS |
Ga0062589_1012328601 | 3300004156 | Soil | MKCEQVRERMPDVAAGLSEATAAESSHLASCTGCAEQFKAMQETMTLLDEW |
Ga0068966_14217002 | 3300004476 | Peatlands Soil | VAERVKEEVVMNCNEIRERMPEVAAGFSETTADESKHLESCGACAEELKA |
Ga0068958_12999652 | 3300004609 | Peatlands Soil | MKCEEIRERMPDVAAGLSQPTAEEGQHLASCAACAEQLKAMSATMALLD |
Ga0068927_13298792 | 3300004610 | Peatlands Soil | MKCDEIRERMPDVAAGFSEPTADEGQHLASCGECAEHLKAMRATMALL |
Ga0072325_12859452 | 3300004972 | Peatlands Soil | MNCEKIHERMPDVASGLSEFTAEESQHLARCKGCAEQLAAM |
Ga0070711_1015116592 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MKCEEIRERMPDVAAGFSDITSGESDHLANCIACSKQLKTM |
Ga0070734_100974273 | 3300005533 | Surface Soil | MKCEEIREKMIDVAAGVSQTTAEENNHLATCATCAEQL |
Ga0070734_102811811 | 3300005533 | Surface Soil | MKCEEIRERMPDVAAGLSQPTTEDSNHLASCSACA |
Ga0070733_107366651 | 3300005541 | Surface Soil | MKCDEIRERMPEVAAGFGEFTADEGKHLTSCGACTEKLKEIRATVALL |
Ga0070732_101704861 | 3300005542 | Surface Soil | MKCDEIRERMPEVAAGFSPITAEEGQHLDNCVNCAEHLKSLRATMAL |
Ga0070732_102871882 | 3300005542 | Surface Soil | MNCDEIRERMPEVTAGFGELTADEDKHLASCDACTKQWKEMRAT |
Ga0068857_1010375242 | 3300005577 | Corn Rhizosphere | MKCEQLRERMPDVAAGLSEATAAESSHLAGCPSCAEQFKAMQETM |
Ga0070762_106824952 | 3300005602 | Soil | MKCEEIRERMPEVAAGFSEPTVEEGKHLESCGACTEQLKAMRSTMALLD |
Ga0075291_10632682 | 3300005884 | Rice Paddy Soil | MKCEDIRERMPDVAAGVTQPTSAESNHLASCTSCADQLKAMRETMSLLDQW |
Ga0075029_1000484271 | 3300006052 | Watersheds | MKCDEIRERMLDVAAGLREPTAQESNHLASCSACAEQLK |
Ga0075029_1006953942 | 3300006052 | Watersheds | MKCDEIRERMPEVAAGLAEPTAEEGQHLAGCAACAEQLK |
Ga0075029_1008181022 | 3300006052 | Watersheds | MNCNEIRDRMPDVAAGFSEPTADESNHLKSCGACAEEMKALQATM |
Ga0075019_105559342 | 3300006086 | Watersheds | MNCQEIRERMPEVAAGFGDLTAEESKHVESCGGCAEQMKAMRQTMAVLDEWQ |
Ga0075015_1001145801 | 3300006102 | Watersheds | MNCDEIRERMPEVAAGFGEPTADESKHLATCVACAEQLKA |
Ga0075030_1007647572 | 3300006162 | Watersheds | MNCNQIRERMPEVAAGFSEPTVEENKHLESCGACAEQLKAM |
Ga0070715_102506571 | 3300006163 | Corn, Switchgrass And Miscanthus Rhizosphere | MNCKEIRERMPDVAAGFSAPTADERKHLDSCGNCAEQLKGMQ |
Ga0075021_109870802 | 3300006354 | Watersheds | MKYDCNEIRERMPDVAAGFNALTTDENQHLANCAGCA |
Ga0102924_12658782 | 3300007982 | Iron-Sulfur Acid Spring | MKCDEIRERMPEVAAGLSPITLEEGQHLESGVNCAEHLKSLRATMALLDEWRAPEPAIRRAA |
Ga0105237_106280612 | 3300009545 | Corn Rhizosphere | MKCDDIRERMPDVAAGVSQPTSAESNHLASCTSCADQLKAMRETMS |
Ga0116105_12420962 | 3300009624 | Peatland | MRVKGEVVMNCNEIRERMPEVAAGFSDATADENKHLESCGACTEELKAM |
Ga0126379_124524302 | 3300010366 | Tropical Forest Soil | MKCEEIRERMPDVAAGYSAPTADESSHLAGCTSCAEQLKGMRATLSL |
Ga0126381_1007195311 | 3300010376 | Tropical Forest Soil | MKCNEIVERIPDVAAAFSNPTVEESAHLAACSACAEKLKAMRAT |
Ga0138534_11104301 | 3300011061 | Peatlands Soil | MKCDEIRERMPDVAAGFSEPTADEGQHLASCGECAEHLKAMRATMALLDEWQ |
Ga0138594_10171112 | 3300011067 | Peatlands Soil | MKCDEIRERMPDVAAGFSEPTADEGQHLASCGECAEHLKAMRA |
Ga0138595_10424131 | 3300011071 | Peatlands Soil | MNCNEIRERMPEVAAGFSETTADESKHLKSCGACAEELKG |
Ga0138576_12471522 | 3300011088 | Peatlands Soil | MKCNCEEIRERMPDVAAGFDALTADESQHLTGCTACTG |
Ga0138579_13040342 | 3300011090 | Peatlands Soil | MNCNEIRERMPEVAAGFSETTADESKHLESCGACAEELKGMRATMALLDEW |
Ga0137390_112192011 | 3300012363 | Vadose Zone Soil | MNCNEIRERMPDVAAGFGEPTADEGKHLESCGACAEQLKAM |
Ga0181531_102782881 | 3300014169 | Bog | MNCNEIRERMPDVAAGFSEATPDDGKHLETCAACAE |
Ga0181535_101820653 | 3300014199 | Bog | MNCNEIRERMPDVAAGFSEATPDDGKHLETCAACAEALKGMKATMAV |
Ga0181519_100807391 | 3300014658 | Bog | MKCDEIRERMPEVAAGFGELTADESNHLASCNTCEQQLKSMRAT |
Ga0137409_109926211 | 3300015245 | Vadose Zone Soil | MKYDCNDIRERMPDVAAGFNALTTDESQHLASCAGCTEQLKS |
Ga0134072_101780632 | 3300015357 | Grasslands Soil | MKCEQLRERMPDVAAGLSEATAAESSHLASCISCAEQF |
Ga0182034_114400822 | 3300016371 | Soil | MKCEEIRERMPDVAAGFSELTTEESNHLAGCAACAEQLKGMR |
Ga0181511_12152122 | 3300016702 | Peatland | MNCNQVRERMPEVAAGFSEFTTDEGKHLESCGACAEEL |
Ga0187802_102190602 | 3300017822 | Freshwater Sediment | MKCDEIRERMTDVAAGCSEFTADESSHLATCMGCAEQLK |
Ga0187818_101851391 | 3300017823 | Freshwater Sediment | MNCEEIRERMPDVAAGLSQATAEEGQHLASCAACAEQLKAMSATMAL |
Ga0187824_103987482 | 3300017927 | Freshwater Sediment | MKCEQLRERMPDVAVGLSEATAAENSHLASCTSCAEQF |
Ga0187809_103335672 | 3300017937 | Freshwater Sediment | MKCDEIRERMPDVAAGLNQFTADENQHFESCAACAEQLKAMRATMTLLDDWHARE |
Ga0187819_102689402 | 3300017943 | Freshwater Sediment | MKCDEIRQRIPDVAAGFSEATTEDSNHLASCGECAEKLKSMRA |
Ga0187817_110028602 | 3300017955 | Freshwater Sediment | MKCEEIRERMVDEAAGLRPATEDESVHLASCAACAEQLNAMRA |
Ga0187782_100932941 | 3300017975 | Tropical Peatland | MKCDEIRERMPDVAAGFAELTVEDGQHLTSCQPCTAKLK |
Ga0187782_101801091 | 3300017975 | Tropical Peatland | MNNVLKCEEIRERMPDLAAGFGEATAGELEHLASCAA |
Ga0187889_104847511 | 3300018023 | Peatland | MKCEEIRERMPDVAAGLSQPTAEEGQHLASCAACAEQLRAMSATM |
Ga0187871_107095322 | 3300018042 | Peatland | MKCDEIRERMPEVAAGFGELTADESNHLASCSRCEEQLKSMR |
Ga0187858_102547431 | 3300018057 | Peatland | MNCNEIRERMPEVAAGFSDATADENKHLESCGACTEELKAMR |
Ga0187765_106573002 | 3300018060 | Tropical Peatland | MKCNEICERMADVAAGFGEFTADERSHLASCIGCAEQLKAMRSTMSLLDEW |
Ga0187770_110158512 | 3300018090 | Tropical Peatland | MKYSLNCDDIRDRMPDVAAGFSKPTTEESNHLASCSACTEQLKAMRATMTLLDEWQVPEP |
Ga0187800_11681972 | 3300019278 | Peatland | VMKCNEIRERMADVAAGFGEFTADESTHLASCIGCA |
Ga0182025_10231431 | 3300019786 | Permafrost | MKCDEIRERMPDVAAGFSKPTIDEGMHLESCGTCAQEFEGVARDN |
Ga0193726_11118471 | 3300020021 | Soil | MNCNQIRERMPDVAAGFSEPTTVEGNHLESCSACAEELKA |
Ga0210396_101121994 | 3300021180 | Soil | MNCNEIRERMPEVAAGFGDATADENKHLESCGACAE |
Ga0210393_108886171 | 3300021401 | Soil | MNCAEIRERMPDVAAGFSEPAADENKHLESCPACAEQLKSMRATMALL |
Ga0210385_101917973 | 3300021402 | Soil | MKCDEIRERMPEVAAGFSELTTDEGKHVESCGACTE |
Ga0210385_103018461 | 3300021402 | Soil | MKEMKCNEIRERMPEVAAGFDKLTLDEGKHLESCAAC |
Ga0210383_111462721 | 3300021407 | Soil | MNCNEIRERMPDVAAGFSELTADEGKHLESCGACAE |
Ga0210394_116780302 | 3300021420 | Soil | MKCDEIRERMPEVAAGFGELRADESNHLASCSTCEEQLKSMRATMSLLDEWQVP |
Ga0213879_102593351 | 3300021439 | Bulk Soil | MNCQEIRERMPEVAAGFDALTADESKHLESCGGCSEQWKGMRQ |
Ga0182009_103313751 | 3300021445 | Soil | MKCEQLRERMPDVAAGLSEATAAESSHLAGCPSCAEQFKAMQET |
Ga0213852_13430762 | 3300021858 | Watersheds | LREAVMNCNEIRDRMPDVAAGFTQLTADEERHFGSCAACTEQLKSMRATM |
Ga0242654_100601182 | 3300022726 | Soil | MNCDEIRERMPEVAAGFGEATLEEHKHLSSCADAPSN |
Ga0242654_103915902 | 3300022726 | Soil | MGEKSLGEAVMKCDEIRERMLDVAAGFSQPTADEGKHLESCGTCAEDLRAMR |
Ga0224545_10225402 | 3300022881 | Soil | MKCDEIRERMPDVAAGFSKPTIDEGMHLESCGTCAQELKALRATMAVLDEWQTP |
Ga0247551_1011902 | 3300023552 | Soil | MNCNEIRERMPDVAAGFSEASPDDGKHLETCAACAEALKGMKATMAVL |
Ga0207685_103927392 | 3300025905 | Corn, Switchgrass And Miscanthus Rhizosphere | MNCKEIRERMPDVAAGFSAPTADERKHLDSCGNCAEQLKGMQATMA |
Ga0207646_111194332 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MKCEEIRERMPDVAAGFSEVTTEESNHLAGCSVCTEQ |
Ga0207726_10216481 | 3300027045 | Tropical Forest Soil | MKCDEIRERMPEVAAGFSELSADENQHLAGCQACAEQLKAMRSTMALLD |
Ga0207780_10443562 | 3300027313 | Tropical Forest Soil | MKCEEIRERMPDVAAGFSESTTEESNHLAGCAVCAEQLKGMRATMSLLDE |
Ga0209333_11101322 | 3300027676 | Forest Soil | MKCDEIRERMPDLAAGFSQPTRDEGKHMESCGACAQQLQALRAT |
Ga0209040_100719111 | 3300027824 | Bog Forest Soil | MKCDEIRGRMPDVAAGFSQATAEENNHLATCEVCSEQLKAMRD |
Ga0209060_105429791 | 3300027826 | Surface Soil | MKCEEIREKMIDVAAGVSQTTAEENNHLATCATCAEQ |
Ga0209167_100880183 | 3300027867 | Surface Soil | MKCDEIRERMPDMAAGFGELTADEGNHLAICSAYGTTEIV |
Ga0209624_105535302 | 3300027895 | Forest Soil | MKCDEIRERMPDVAAGLSQATTEENRHFSSCTGCAG |
Ga0209006_107183921 | 3300027908 | Forest Soil | MKNNCDEIRERMPEVAAGFDAATAEESQHLATCTECTEKLKEMRSTMALLDEWQ |
Ga0209526_104848262 | 3300028047 | Forest Soil | MKCNEIHEWMPDVAAGFSEPTPDESKHLESCGACAQQLKEMRATMTLLDG |
Ga0189899_1045861 | 3300028445 | Peatlands Soil | MKCDEIRERMPDVAAGFSEPTADEGQHLASCGECAEHLKAMR |
Ga0265338_100229961 | 3300028800 | Rhizosphere | MKCDEIRERIPDVAAGFSEPTADESQHLASCNDCAEQL |
Ga0302221_101254573 | 3300028806 | Palsa | MKCDEIRERMPDVAAGFSEATAEESSHLAGCGACSEQLKAMQSTMALLDEWQTP |
Ga0311340_101530824 | 3300029943 | Palsa | MNCNEIRERMPDVAAGFSAATLDDGKHLETCGACAEELKAMRATMALLDEWKV |
Ga0307496_100652312 | 3300031200 | Soil | MKCQDIREKMSDVAAGFSEPTADESNHLATCNVCAEQLK |
Ga0307476_104170612 | 3300031715 | Hardwood Forest Soil | MKCDEIRERMPDMAAGYSQPTGDEGEHLESCGDCAQELKAMRETMILLDEW |
Ga0307474_109371271 | 3300031718 | Hardwood Forest Soil | MKCDEILERMPEVAAGFSELTTDEGKHVESCGACSEKLKAMRA |
Ga0307477_101696632 | 3300031753 | Hardwood Forest Soil | MKCDEIRERMPDMAAGYSQPTGDEGEHLESCGDCAQELKA |
Ga0307479_106626282 | 3300031962 | Hardwood Forest Soil | MTCNEIRERMPDVAAGLDQLTADESTHLASCKECAGKLGE |
Ga0307479_115626751 | 3300031962 | Hardwood Forest Soil | MKCDEIRERMPDVAAGFCEPTADEGRHLESCGACAQQLKAMRATMALLDEWKVKEPS |
Ga0311301_108550051 | 3300032160 | Peatlands Soil | MKCEEIRERMPDVAAGLSQPTAEEGQHLASCAACAEQLKAMSATMALL |
Ga0311301_110173132 | 3300032160 | Peatlands Soil | LAKSVKGEVVMNCNEIRERMPEVAAGFSEPTADEAKHLENCGACAEQLKGM |
Ga0335075_107353111 | 3300032896 | Soil | MKCDEIRERLPDVAAGLSQATAEETQHLSSCGGCADQLKE |
Ga0326726_121787772 | 3300033433 | Peat Soil | MKCEEVRERMPDVAAGFSEPTADESQHLASCGECSEQLKAM |
Ga0370492_0306072_1_150 | 3300034282 | Untreated Peat Soil | MNCDEIRERMPDVAAGFSEPTADENKHLESCAACVEQLTSMRATMALLDE |
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