NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F105938

Metagenome / Metatranscriptome Family F105938

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105938
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 55 residues
Representative Sequence MKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC
Number of Associated Samples 93
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 59.60 %
% of genes near scaffold ends (potentially truncated) 46.00 %
% of genes from short scaffolds (< 2000 bps) 86.00 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (67.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(31.000 % of family members)
Environment Ontology (ENVO) Unclassified
(34.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 66.67%    β-sheet: 0.00%    Coil/Unstructured: 33.33%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00912Transgly 26.00
PF07883Cupin_2 9.00
PF07077DUF1345 3.00
PF01783Ribosomal_L32p 2.00
PF03928HbpS-like 1.00
PF07879PHB_acc_N 1.00
PF01019G_glu_transpept 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0744Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidaseCell wall/membrane/envelope biogenesis [M] 26.00
COG4953Membrane carboxypeptidase/penicillin-binding protein PbpCCell wall/membrane/envelope biogenesis [M] 26.00
COG5009Membrane carboxypeptidase/penicillin-binding proteinCell wall/membrane/envelope biogenesis [M] 26.00
COG4291Uncharacterized membrane proteinFunction unknown [S] 3.00
COG0333Ribosomal protein L32Translation, ribosomal structure and biogenesis [J] 2.00
COG0405Gamma-glutamyltranspeptidaseAmino acid transport and metabolism [E] 1.00
COG5394Polyhydroxyalkanoate (PHA) synthesis regulator protein, binds DNA and PHASignal transduction mechanisms [T] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms67.00 %
UnclassifiedrootN/A33.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000907|JGI11871J12876_105368Not Available517Open in IMG/M
3300000956|JGI10216J12902_101233740All Organisms → cellular organisms → Bacteria → Proteobacteria675Open in IMG/M
3300002075|JGI24738J21930_10071775Not Available718Open in IMG/M
3300002568|C688J35102_118772394All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300004643|Ga0062591_101596300All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300005147|Ga0066821_1006217All Organisms → cellular organisms → Bacteria → Proteobacteria768Open in IMG/M
3300005158|Ga0066816_1019252All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium566Open in IMG/M
3300005163|Ga0066823_10000156All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales7359Open in IMG/M
3300005169|Ga0066810_10030224All Organisms → cellular organisms → Bacteria → Proteobacteria964Open in IMG/M
3300005332|Ga0066388_101583534All Organisms → cellular organisms → Bacteria1152Open in IMG/M
3300005339|Ga0070660_100714282All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300005355|Ga0070671_100088307All Organisms → cellular organisms → Bacteria2594Open in IMG/M
3300005356|Ga0070674_100452746All Organisms → cellular organisms → Bacteria1060Open in IMG/M
3300005406|Ga0070703_10480863Not Available555Open in IMG/M
3300005437|Ga0070710_11283763Not Available544Open in IMG/M
3300005456|Ga0070678_100763385All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300005546|Ga0070696_101047046Not Available684Open in IMG/M
3300005564|Ga0070664_100051691All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3479Open in IMG/M
3300005577|Ga0068857_100840638All Organisms → cellular organisms → Bacteria878Open in IMG/M
3300006038|Ga0075365_10009902All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia5518Open in IMG/M
3300006038|Ga0075365_10552651All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium814Open in IMG/M
3300006163|Ga0070715_11077788Not Available505Open in IMG/M
3300006175|Ga0070712_100624628All Organisms → cellular organisms → Bacteria → Proteobacteria914Open in IMG/M
3300006574|Ga0074056_11767703Not Available804Open in IMG/M
3300006579|Ga0074054_11952893All Organisms → cellular organisms → Bacteria → Proteobacteria915Open in IMG/M
3300006581|Ga0074048_13461038All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300006605|Ga0074057_12279657All Organisms → cellular organisms → Bacteria → Proteobacteria746Open in IMG/M
3300006953|Ga0074063_10111036All Organisms → cellular organisms → Bacteria → Proteobacteria679Open in IMG/M
3300009011|Ga0105251_10503874Not Available566Open in IMG/M
3300009036|Ga0105244_10143084All Organisms → cellular organisms → Bacteria → Proteobacteria1149Open in IMG/M
3300009143|Ga0099792_10640675Not Available681Open in IMG/M
3300009156|Ga0111538_13028718All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium587Open in IMG/M
3300009177|Ga0105248_10307473All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides agariphilus1785Open in IMG/M
3300010043|Ga0126380_11864582Not Available546Open in IMG/M
3300010044|Ga0126310_11223979Not Available604Open in IMG/M
3300010047|Ga0126382_10358102All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1121Open in IMG/M
3300010362|Ga0126377_11877026All Organisms → cellular organisms → Bacteria → Proteobacteria675Open in IMG/M
3300010371|Ga0134125_10652390All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1162Open in IMG/M
3300010396|Ga0134126_10516015All Organisms → cellular organisms → Bacteria → Proteobacteria1375Open in IMG/M
3300010400|Ga0134122_10104161All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2251Open in IMG/M
3300010400|Ga0134122_12873597Not Available535Open in IMG/M
3300010403|Ga0134123_11989183Not Available639Open in IMG/M
3300012206|Ga0137380_10628567All Organisms → cellular organisms → Bacteria → Proteobacteria937Open in IMG/M
3300012924|Ga0137413_10074380All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2045Open in IMG/M
3300012951|Ga0164300_10276237All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → unclassified Hyphomonadaceae → Hyphomonadaceae bacterium866Open in IMG/M
3300012951|Ga0164300_10339717All Organisms → cellular organisms → Bacteria → Proteobacteria802Open in IMG/M
3300012957|Ga0164303_10777750Not Available655Open in IMG/M
3300012961|Ga0164302_11954411Not Available501Open in IMG/M
3300012984|Ga0164309_11945536Not Available504Open in IMG/M
3300012986|Ga0164304_11820356Not Available509Open in IMG/M
3300013306|Ga0163162_12493489Not Available595Open in IMG/M
3300014969|Ga0157376_12398431Not Available567Open in IMG/M
3300015372|Ga0132256_100482611All Organisms → cellular organisms → Bacteria1349Open in IMG/M
3300017965|Ga0190266_10081812All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides agariphilus1266Open in IMG/M
3300018000|Ga0184604_10112218Not Available859Open in IMG/M
3300018027|Ga0184605_10490717Not Available536Open in IMG/M
3300018067|Ga0184611_1225724All Organisms → cellular organisms → Bacteria → Proteobacteria666Open in IMG/M
3300018077|Ga0184633_10102537All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides agariphilus1479Open in IMG/M
3300018083|Ga0184628_10044035All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2245Open in IMG/M
3300018429|Ga0190272_10293951All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides agariphilus1253Open in IMG/M
3300018465|Ga0190269_10834721Not Available669Open in IMG/M
3300018465|Ga0190269_11918676Not Available511Open in IMG/M
3300018469|Ga0190270_12500308Not Available578Open in IMG/M
3300018476|Ga0190274_11840266All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria700Open in IMG/M
3300019279|Ga0184642_1353550All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium643Open in IMG/M
3300019767|Ga0190267_10635917Not Available670Open in IMG/M
3300019887|Ga0193729_1026047All Organisms → cellular organisms → Bacteria → Proteobacteria2500Open in IMG/M
3300025899|Ga0207642_10039814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides agariphilus2046Open in IMG/M
3300025901|Ga0207688_10001807All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales11384Open in IMG/M
3300025903|Ga0207680_10212258All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1324Open in IMG/M
3300025915|Ga0207693_10344170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides agariphilus1167Open in IMG/M
3300025937|Ga0207669_11649346Not Available547Open in IMG/M
3300026041|Ga0207639_11114931All Organisms → cellular organisms → Bacteria → Proteobacteria740Open in IMG/M
3300026041|Ga0207639_12251798Not Available506Open in IMG/M
3300026555|Ga0179593_1091339All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2204Open in IMG/M
3300026557|Ga0179587_10303308All Organisms → cellular organisms → Bacteria → Proteobacteria1030Open in IMG/M
3300027909|Ga0209382_11579240All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria650Open in IMG/M
3300028380|Ga0268265_11687355All Organisms → cellular organisms → Bacteria → Proteobacteria639Open in IMG/M
3300028704|Ga0307321_1004769All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2252Open in IMG/M
3300028707|Ga0307291_1079910All Organisms → cellular organisms → Bacteria → Proteobacteria805Open in IMG/M
3300028708|Ga0307295_10003261All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3702Open in IMG/M
3300028709|Ga0307279_10026648All Organisms → cellular organisms → Bacteria → Proteobacteria833Open in IMG/M
3300028717|Ga0307298_10045042All Organisms → cellular organisms → Bacteria → Proteobacteria1200Open in IMG/M
3300028754|Ga0307297_10217191All Organisms → cellular organisms → Bacteria → Proteobacteria672Open in IMG/M
3300028768|Ga0307280_10019208Not Available1949Open in IMG/M
3300028787|Ga0307323_10166465Not Available796Open in IMG/M
3300028790|Ga0307283_10038364All Organisms → cellular organisms → Bacteria → Proteobacteria1100Open in IMG/M
3300028790|Ga0307283_10165236All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium618Open in IMG/M
3300028793|Ga0307299_10330062Not Available572Open in IMG/M
3300028828|Ga0307312_10433232All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides agariphilus865Open in IMG/M
3300028875|Ga0307289_10048559All Organisms → cellular organisms → Bacteria → Proteobacteria1694Open in IMG/M
3300028875|Ga0307289_10207776Not Available805Open in IMG/M
3300028876|Ga0307286_10285324All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium608Open in IMG/M
3300028885|Ga0307304_10142072All Organisms → cellular organisms → Bacteria → Proteobacteria994Open in IMG/M
3300030997|Ga0073997_11631857All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium591Open in IMG/M
3300031455|Ga0307505_10198283All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides agariphilus926Open in IMG/M
3300031908|Ga0310900_10740848All Organisms → cellular organisms → Bacteria → Proteobacteria790Open in IMG/M
3300032205|Ga0307472_100586411All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria981Open in IMG/M
3300032211|Ga0310896_10806558Not Available538Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil31.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil5.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.00%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere2.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.00%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.00%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.00%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.00%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000907Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1EnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4Host-AssociatedOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005147Soil and rhizosphere microbial communities from Laval, Canada - mgLMCEnvironmentalOpen in IMG/M
3300005158Soil and rhizosphere microbial communities from Laval, Canada - mgHAAEnvironmentalOpen in IMG/M
3300005163Soil and rhizosphere microbial communities from Laval, Canada - mgHMBEnvironmentalOpen in IMG/M
3300005169Soil and rhizosphere microbial communities from Laval, Canada - mgHPAEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006574Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006605Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009036Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028704Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379EnvironmentalOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028709Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118EnvironmentalOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028790Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030997Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300034151Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI11871J12876_10536823300000907Forest SoilMKTTVMKLAFAKFAIALALAGGVALGAVAVSLTGATASFAQQCIPHYDS
JGI10216J12902_10123374013300000956SoilMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQ
JGI24738J21930_1007177513300002075Corn RhizosphereMKTTVKFALAKFVLGLAXAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC*
C688J35102_11877239413300002568SoilFRRGTKEQWRMNMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC*
Ga0062591_10159630013300004643SoilMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQAAPYC*
Ga0066821_100621723300005147SoilMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC*
Ga0066816_101925223300005158SoilRGTKEQWRMNMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC*
Ga0066823_1000015693300005163SoilMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC*
Ga0066810_1003022423300005169SoilMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDTSGAQTAPYC*
Ga0066388_10158353423300005332Tropical Forest SoilMQTTMTKFAIALAVAGGVALSAVAVSLTSASAQPRWQGQCIPQYDSSGAQVAPYC*
Ga0070660_10071428233300005339Corn RhizosphereMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYD
Ga0070671_10008830713300005355Switchgrass RhizosphereMKTTVKFALAKLVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQAAPYC*
Ga0070674_10045274623300005356Miscanthus RhizosphereMNMQTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQAAPYC*
Ga0070703_1048086313300005406Corn, Switchgrass And Miscanthus RhizosphereMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPY
Ga0070710_1128376323300005437Corn, Switchgrass And Miscanthus RhizosphereMNMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDTSGAQTAPYC*
Ga0070678_10076338523300005456Miscanthus RhizosphereMNMQTTVKFALGKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQAAPYC*
Ga0070696_10104704613300005546Corn, Switchgrass And Miscanthus RhizosphereMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDTSGAQAAPYC*
Ga0070664_10005169163300005564Corn RhizosphereMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQAAPYCVAIRFAS*
Ga0068857_10084063813300005577Corn RhizosphereMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCI
Ga0075365_1000990223300006038Populus EndosphereMKTTVKFALGRFVLGLALASGLAVSTVAVSLTGATASFAQQCIPHYDTSGAQAAPYC*
Ga0075365_1055265123300006038Populus EndosphereMQMVTRLALAFAVFGGVALSVAAASLTVATPSFAQSQPQCIPHYDSSGAQRPPYC*
Ga0070715_1107778823300006163Corn, Switchgrass And Miscanthus RhizosphereGTKEQWRMNMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC*
Ga0070712_10062462813300006175Corn, Switchgrass And Miscanthus RhizosphereMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPHYDTSGAQTAPYC*
Ga0074056_1176770323300006574SoilKTTVMKLAFAKFAIALALAGGVALGAVAVSLTGATASFAQQCIPHYDSSGAQTAPYC*
Ga0074054_1195289313300006579SoilMKTTVMKLAFAKFAIALALAGGVALGAVAVSLTGATASFAQQCIPHYDSSGAQTAPYC*
Ga0074048_1346103813300006581SoilMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQRCIPHYDSSGAQTAPYC*
Ga0074057_1227965713300006605SoilMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPHYDSS
Ga0074063_1011103623300006953SoilKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC*
Ga0105251_1050387423300009011Switchgrass RhizosphereMNMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPHYDTSGAQTAPYC*
Ga0105244_1014308423300009036Miscanthus RhizosphereMNMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC*
Ga0099792_1064067523300009143Vadose Zone SoilMKTTVMKLAFAKFAIALALAGGVALGAVAVSLTGATASFAQQCIPHYDSSGAQ
Ga0111538_1302871813300009156Populus RhizosphereQWRMNMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC*
Ga0105248_1030747313300009177Switchgrass RhizosphereMNMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFSQQCIPHYDSSGAQTAPYC*
Ga0126380_1186458213300010043Tropical Forest SoilMQTTMMKLAIALAVAGDVALSAAAVSLGGATASFAQWQPQSQCIPHYDTSGAQTAPYC*
Ga0126310_1122397923300010044Serpentine SoilMNMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC*
Ga0126382_1035810223300010047Tropical Forest SoilALAVAGGVALSAAAVSLGGATASFAQWQSQSQCIPHYDSSGAQTAPYC*
Ga0126377_1187702613300010362Tropical Forest SoilMNMQTTVTKLVIALAVAGGVALSAAAVSLGGATASFAQWQPQSQCIPHYDTSGAQTAPYC
Ga0134125_1065239023300010371Terrestrial SoilMNMKTTVKFALAKFVLGLAVAGGLALSTVTVSLTGATASFAQQCIPHYDSSGAQAAPYC*
Ga0134126_1051601523300010396Terrestrial SoilMNMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQAAPYC*
Ga0134122_1010416113300010400Terrestrial SoilFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC*
Ga0134122_1287359713300010400Terrestrial SoilMNMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQ
Ga0134123_1198918323300010403Terrestrial SoilMNMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQHCIPHYDSSGAQTAPYC*
Ga0137380_1062856723300012206Vadose Zone SoilMNPIMKQLAIALAIRAGIALGAAAVSLTTATGSLAQPQCIPHYDSSGAQTAPYC*
Ga0137413_1007438043300012924Vadose Zone SoilMKTTVMKLAFAKFAIALALAGSVALGAVAVSLTGATASFAQQCIPHYDSSGAQTAPYC*
Ga0164300_1027623713300012951SoilMNMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQAAPYC*
Ga0164300_1033971733300012951SoilMNMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPHYDSSG
Ga0164303_1077775023300012957SoilMNMKTTVKFALAKFVLGLALAGGLALSTVAVSLTVATASFAQHCIPHYDSSGAQTAPYC*
Ga0164302_1195441123300012961SoilMKTTVMKLAFAKFAIALALAGGVALGAVAVSLTGATASFAQQGIPHYDSSGAQTAPYC*
Ga0164309_1194553613300012984SoilMNMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAP
Ga0164304_1182035623300012986SoilMNMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPH
Ga0163162_1249348933300013306Switchgrass RhizosphereMNMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQ
Ga0157376_1239843113300014969Miscanthus RhizosphereMNMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYD
Ga0132256_10048261123300015372Arabidopsis RhizosphereMNMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDTSGAQAAPYC*
Ga0190266_1008181223300017965SoilMKTTVMKLAFAKFAIALALAGGVALGAVAVSLTGATASFAQQCIPHYDSSGAQTAPYC
Ga0184604_1011221823300018000Groundwater SedimentRGTKEQWRMNMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDTSGAQTAPYC
Ga0184605_1049071713300018027Groundwater SedimentMKTTVMKLAFAKFAIALALAGSVALGAVAVSLTGATASFAQQCIPHYDSSGAQTAPYC
Ga0184611_122572413300018067Groundwater SedimentMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDTSGAQTAPYC
Ga0184633_1010253713300018077Groundwater SedimentMKMTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC
Ga0184628_1004403513300018083Groundwater SedimentMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASF
Ga0190272_1029395123300018429SoilMKTTVKFALAKFVLGLALAGGLALSTVAVALAGAPASFAPPCIPHYDSSGAQTAPYC
Ga0190269_1083472123300018465SoilMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQAAPYC
Ga0190269_1191867623300018465SoilNMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC
Ga0190270_1250030813300018469SoilMKTTVKFALAKFVLGLALAGGLALGAVAVSLTGATASFAQQCIPHYDSSGAQTAPYC
Ga0190274_1184026623300018476SoilMNMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC
Ga0184642_135355023300019279Groundwater SedimentMKTTVMKLAFAKFAIALALAGGLALGAVAVSLTGATASFAQQCIPHYDTSGAQTAPYC
Ga0190267_1063591713300019767SoilMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQRCIPHYDSSGAQAAPYC
Ga0193729_102604723300019887SoilMKTTVMKLAFAKFAIALALAGGVALGAVAVSLTGATASFAQQCIPHYDTSGAQTAPYC
Ga0207642_1003981413300025899Miscanthus RhizosphereMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC
Ga0207688_1000180773300025901Corn, Switchgrass And Miscanthus RhizosphereMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC
Ga0207680_1021225813300025903Switchgrass RhizosphereVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDTSGAQTAPYC
Ga0207693_1034417033300025915Corn, Switchgrass And Miscanthus RhizosphereMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPHYDTSGAQTAPYC
Ga0207669_1164934613300025937Miscanthus RhizosphereMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIP
Ga0207639_1111493113300026041Corn RhizosphereMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDTSGAQTAP
Ga0207639_1225179823300026041Corn RhizosphereFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC
Ga0179593_109133943300026555Vadose Zone SoilMKTTVKFALGKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDTSGAQTAPYC
Ga0179587_1030330823300026557Vadose Zone SoilMKTTVMKLAFAKFAIALALVGSVALGAVAVSLTGATASFAQQCIPHYDSSGAQTAPYC
Ga0209382_1157924023300027909Populus RhizosphereGIALAVAGGVALSAAAVSLGGATASFAQWQPQSQCIPHYDSSGAQTAPYC
Ga0268265_1168735533300028380Switchgrass RhizosphereMKTTVKFALAKFVLGLAVAGGLALSTVAVSLTGATASFAQQCIPHYDSSGA
Ga0307321_100476923300028704SoilMKTTVMKLAFAKFAIALALAGGVALGAVAVSLTGATASFAQQCIPHYDSSGAQMAPYC
Ga0307291_107991013300028707SoilMKTTVMKLAFAKFAIALALAGGVALGAVAVSLTGATASFAQQ
Ga0307295_1000326123300028708SoilMKTTVKFALGKFVIGLALAGGLALSTVAVSLTGATASFAQQCIPHYDTSGAQTAPYC
Ga0307279_1002664833300028709SoilMKTTVMKLAFAKFAIALALAGSVALGAVAVSLTGATASFAQQCIPHYDTSGAQTAPYC
Ga0307298_1004504233300028717SoilAKFAIALALAGGVALGAVAVSLTGATASFAQQCIPHYDSSGAQTAPYC
Ga0307297_1021719133300028754SoilMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDTSGAQTA
Ga0307280_1001920813300028768SoilMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHY
Ga0307323_1016646523300028787SoilKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDTSGAQTAPYC
Ga0307283_1003836423300028790SoilMKTTVKFALGKFVIGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC
Ga0307283_1016523613300028790SoilTTVMKLAFAKFAIALALAGGVALGAVAVSLTGATASFAQQCIPHYDSSGAQTAPYC
Ga0307299_1033006223300028793SoilMKTTVMKLAFAKFAIALALAGGVALGAVAVSLTGATASFAQQCIPHYDSSGAQT
Ga0307312_1043323233300028828SoilMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDS
Ga0307289_1004855943300028875SoilMKLAFAKFAIALALAGGVALGAVAVSLTGATASFAQQCIPHYDSSGAQTAPYC
Ga0307289_1020777623300028875SoilLGKFVIGLALAGGLALSTVAVSLTGATASFAQQCIPHYDTSGAQTAPYC
Ga0307286_1028532423300028876SoilALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC
Ga0307304_1014207213300028885SoilMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSS
Ga0073997_1163185713300030997SoilDMKTTVMKLAFAKFAIALALAGGVALGAVAVSLTGATASFAQQCIPHYDSSGAQTAPYC
Ga0307505_1019828313300031455SoilMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGA
Ga0310900_1074084823300031908SoilMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQHCIPHYDSSGAQTAPYC
Ga0307472_10058641123300032205Hardwood Forest SoilMKTTFTKFAIALALAGGVALSAAAVSLTSATESSAQPRWQGQCIPQYDSSGAQVAPYC
Ga0310896_1080655813300032211SoilWRMNMKTTVKFALAKFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPY
Ga0364935_0214079_482_6223300034151SedimentFVLGLALAGGLALSTVAVSLTGATASFAQQCIPHYDSSGAQTAPYC

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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