NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F105918

Metagenome / Metatranscriptome Family F105918

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105918
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 40 residues
Representative Sequence MAREADQIAQDYSAMLGSVSVITNCLDDDNEFCNDMTS
Number of Associated Samples 77
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 97.00 %
% of genes from short scaffolds (< 2000 bps) 89.00 %
Associated GOLD sequencing projects 67
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (60.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(30.000 % of family members)
Environment Ontology (ENVO) Unclassified
(92.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(89.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 60.53%    β-sheet: 0.00%    Coil/Unstructured: 39.47%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF13884Peptidase_S74 90.00
PF137592OG-FeII_Oxy_5 9.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms76.00 %
unclassified Hyphomonasno rankunclassified Hyphomonas13.00 %
UnclassifiedrootN/A11.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10041213All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium2409Open in IMG/M
3300000101|DelMOSum2010_c10172176All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium762Open in IMG/M
3300000101|DelMOSum2010_c10275792All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium515Open in IMG/M
3300000115|DelMOSum2011_c10177224All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium610Open in IMG/M
3300000116|DelMOSpr2010_c10229007All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium578Open in IMG/M
3300000117|DelMOWin2010_c10064291All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium1517Open in IMG/M
3300001450|JGI24006J15134_10196219All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium SB2619Open in IMG/M
3300001472|JGI24004J15324_10082561All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium866Open in IMG/M
3300001472|JGI24004J15324_10095970Not Available771Open in IMG/M
3300001472|JGI24004J15324_10102855All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium730Open in IMG/M
3300001472|JGI24004J15324_10115139All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300001472|JGI24004J15324_10125406All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium SB2623Open in IMG/M
3300001589|JGI24005J15628_10090500All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1052Open in IMG/M
3300002482|JGI25127J35165_1029215All Organisms → Viruses → Predicted Viral1274Open in IMG/M
3300002483|JGI25132J35274_1043778All Organisms → cellular organisms → Bacteria982Open in IMG/M
3300002488|JGI25128J35275_1024164All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1467Open in IMG/M
3300005086|Ga0072334_10385888All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium649Open in IMG/M
3300006164|Ga0075441_10063186All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium1451Open in IMG/M
3300006164|Ga0075441_10291842unclassified Hyphomonas → Hyphomonas sp.596Open in IMG/M
3300006193|Ga0075445_10045912All Organisms → Viruses → Predicted Viral1753Open in IMG/M
3300006752|Ga0098048_1033341unclassified Hyphomonas → Hyphomonas sp.1670Open in IMG/M
3300006752|Ga0098048_1212855Not Available569Open in IMG/M
3300006793|Ga0098055_1244908All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium675Open in IMG/M
3300006920|Ga0070748_1188598All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium757Open in IMG/M
3300006928|Ga0098041_1241513All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium576Open in IMG/M
3300006929|Ga0098036_1081388unclassified Hyphomonas → Hyphomonas sp.998Open in IMG/M
3300006947|Ga0075444_10057797All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1809Open in IMG/M
3300006990|Ga0098046_1091407All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300007276|Ga0070747_1260914unclassified Hyphomonas → Hyphomonas sp.600Open in IMG/M
3300007276|Ga0070747_1321248All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium530Open in IMG/M
3300007539|Ga0099849_1027792All Organisms → Viruses → Predicted Viral2431Open in IMG/M
3300008218|Ga0114904_1020071Not Available1976Open in IMG/M
3300008220|Ga0114910_1071665Not Available1071Open in IMG/M
3300008220|Ga0114910_1071853All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1069Open in IMG/M
3300008220|Ga0114910_1116186All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04785Open in IMG/M
3300008220|Ga0114910_1193166All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium563Open in IMG/M
3300009418|Ga0114908_1084926All Organisms → Viruses → Predicted Viral1077Open in IMG/M
3300009418|Ga0114908_1136842All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium794Open in IMG/M
3300009428|Ga0114915_1090553Not Available921Open in IMG/M
3300009428|Ga0114915_1220639All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium516Open in IMG/M
3300009601|Ga0114914_1075055All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300009605|Ga0114906_1220761All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium628Open in IMG/M
3300010149|Ga0098049_1085204unclassified Hyphomonas → Hyphomonas sp.993Open in IMG/M
3300017730|Ga0181417_1064641unclassified Hyphomonas → Hyphomonas sp.890Open in IMG/M
3300017730|Ga0181417_1161039All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium541Open in IMG/M
3300017744|Ga0181397_1069498All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium950Open in IMG/M
3300017745|Ga0181427_1149246All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium566Open in IMG/M
3300017751|Ga0187219_1231302unclassified Hyphomonas → Hyphomonas sp.502Open in IMG/M
3300017755|Ga0181411_1153997All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium660Open in IMG/M
3300017764|Ga0181385_1065300All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1125Open in IMG/M
3300017767|Ga0181406_1039104All Organisms → Viruses → Predicted Viral1478Open in IMG/M
3300017767|Ga0181406_1221148All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium559Open in IMG/M
3300017773|Ga0181386_1268387All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium502Open in IMG/M
3300017782|Ga0181380_1170537All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium736Open in IMG/M
3300018420|Ga0181563_10528476All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300021960|Ga0222715_10209771All Organisms → Viruses → Predicted Viral1159Open in IMG/M
3300022074|Ga0224906_1063832unclassified Hyphomonas → Hyphomonas sp.1148Open in IMG/M
3300022178|Ga0196887_1037740All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1302Open in IMG/M
3300022925|Ga0255773_10332782Not Available605Open in IMG/M
3300022929|Ga0255752_10095089All Organisms → Viruses → Predicted Viral1640Open in IMG/M
3300024314|Ga0228657_1072119All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300025101|Ga0208159_1051298unclassified Hyphomonas → Hyphomonas sp.854Open in IMG/M
3300025127|Ga0209348_1110562unclassified Hyphomonas → Hyphomonas sp.844Open in IMG/M
3300025128|Ga0208919_1162569All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium687Open in IMG/M
3300025137|Ga0209336_10077792All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium973Open in IMG/M
3300025137|Ga0209336_10077892Not Available972Open in IMG/M
3300025137|Ga0209336_10147827All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium SB2623Open in IMG/M
3300025141|Ga0209756_1049197All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium2074Open in IMG/M
3300025151|Ga0209645_1035055unclassified Hyphomonas → Hyphomonas sp.1827Open in IMG/M
3300025168|Ga0209337_1169711All Organisms → cellular organisms → Bacteria → Proteobacteria922Open in IMG/M
3300025237|Ga0208031_1018911All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium SB2929Open in IMG/M
3300025266|Ga0208032_1060708All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium846Open in IMG/M
3300025277|Ga0208180_1129295All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300025282|Ga0208030_1104664Not Available709Open in IMG/M
3300025282|Ga0208030_1118245All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium651Open in IMG/M
3300025543|Ga0208303_1009070Not Available3148Open in IMG/M
3300025652|Ga0208134_1030975All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium1883Open in IMG/M
3300025751|Ga0208150_1101427All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium941Open in IMG/M
3300025759|Ga0208899_1036732All Organisms → Viruses → Predicted Viral2231Open in IMG/M
3300025853|Ga0208645_1140921All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300026504|Ga0247587_1052480All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300027686|Ga0209071_1063944Not Available1100Open in IMG/M
3300027771|Ga0209279_10052066All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1163Open in IMG/M
3300028022|Ga0256382_1092246All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium725Open in IMG/M
3300029319|Ga0183748_1017914All Organisms → Viruses → Predicted Viral2600Open in IMG/M
3300029787|Ga0183757_1008163unclassified Hyphomonas → Hyphomonas sp.3174Open in IMG/M
3300029787|Ga0183757_1011176unclassified Hyphomonas → Hyphomonas sp.2526Open in IMG/M
3300029787|Ga0183757_1042683All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300031519|Ga0307488_10659421All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae598Open in IMG/M
3300031598|Ga0308019_10019643All Organisms → Viruses → Predicted Viral3088Open in IMG/M
3300031598|Ga0308019_10054305All Organisms → Viruses → Predicted Viral1705Open in IMG/M
3300031599|Ga0308007_10199638All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium696Open in IMG/M
3300031626|Ga0302121_10219468All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium538Open in IMG/M
3300031627|Ga0302118_10305673All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium734Open in IMG/M
3300031630|Ga0308004_10187074All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium848Open in IMG/M
3300031659|Ga0307986_10032622All Organisms → Viruses → Predicted Viral2865Open in IMG/M
3300031675|Ga0302122_10337360All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium521Open in IMG/M
3300031696|Ga0307995_1061495All Organisms → Viruses → Predicted Viral1540Open in IMG/M
3300031702|Ga0307998_1163569All Organisms → cellular organisms → Bacteria775Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine30.00%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean16.00%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater12.00%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous10.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine10.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine7.00%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine6.00%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh3.00%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater2.00%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine1.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.00%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.00%
WaterEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Water1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300002482Marine viral communities from the Pacific Ocean - ETNP_2_30EnvironmentalOpen in IMG/M
3300002483Marine viral communities from the Pacific Ocean - ETNP_6_30EnvironmentalOpen in IMG/M
3300002488Marine viral communities from the Pacific Ocean - ETNP_2_60EnvironmentalOpen in IMG/M
3300005086Microbial Community from Halfdan Field MHDA3EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006193Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNAEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009601Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_38EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300017730Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300022925Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaGEnvironmentalOpen in IMG/M
3300022929Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaGEnvironmentalOpen in IMG/M
3300024314Seawater microbial communities from Monterey Bay, California, United States - 70DEnvironmentalOpen in IMG/M
3300025101Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025237Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_38 (SPAdes)EnvironmentalOpen in IMG/M
3300025266Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66 (SPAdes)EnvironmentalOpen in IMG/M
3300025277Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)EnvironmentalOpen in IMG/M
3300025282Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300026504Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 46R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027686Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027771Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300029319Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516EnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031598Marine microbial communities from water near the shore, Antarctic Ocean - #284EnvironmentalOpen in IMG/M
3300031599Marine microbial communities from water near the shore, Antarctic Ocean - #71EnvironmentalOpen in IMG/M
3300031626Marine microbial communities from Western Arctic Ocean, Canada - CB21_surfaceEnvironmentalOpen in IMG/M
3300031627Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1EnvironmentalOpen in IMG/M
3300031630Marine microbial communities from water near the shore, Antarctic Ocean - #38EnvironmentalOpen in IMG/M
3300031659Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82EnvironmentalOpen in IMG/M
3300031675Marine microbial communities from Western Arctic Ocean, Canada - CB21_SCMEnvironmentalOpen in IMG/M
3300031696Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262EnvironmentalOpen in IMG/M
3300031702Marine microbial communities from David Island wharf, Antarctic Ocean - #37EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1004121323300000101MarineMTNRTDDQIAQDYSAMLGSVSVITNVIDDSNEFCNDMT
DelMOSum2010_1017217613300000101MarineMTDRTDEQIAQDYSAMLGSVSVITNVIDDSNEFCND
DelMOSum2010_1027579213300000101MarineMARDADQIAQDYSAMLGSVSVITNVIDDDNPFCNDMTLAEKKE
DelMOSum2011_1017722413300000115MarineMTDRTDEQIAQDYSAMLGSVSVITNVIDDSNEFCN
DelMOSpr2010_1022900723300000116MarineMARDADQIAQDHAAMLGSVSVITNVIDDDNDFCNDMTLAKRKSV*
DelMOWin2010_1006429123300000117MarineMAESVERSDEQKAQDYSAMLGSVSVITNCLDDDNEFCNDMT
JGI24006J15134_1019621913300001450MarineMTRETDQIAQDYSAMLGSVSVITNVIDDGNEFCNDMTTAE
JGI24006J15134_1022173213300001450MarineMTREADQIAQDYSAMLNSVNVIESVLDAKNDFYND
JGI24004J15324_1008256123300001472MarineMARETDQIAQDYSAMLGSVSVITNCLDDSNEFCNDMT
JGI24004J15324_1009597023300001472MarineMTRETDQVAQDYSAMLGSVSVITNVIDDSNEFCNDMTTAE
JGI24004J15324_1010285513300001472MarineMTRETDQIVQDYSAMLGSVSVITNVIDDSNEFCNDMTT
JGI24004J15324_1011513933300001472MarineMTRETDQIAQDYSAMLGSVSVITNVIDDSNEFCNDMTTA
JGI24004J15324_1012540613300001472MarineMTRETDQMAQDYSAMLGSVSVITNVIDDSNEFCNDMTTAE
JGI24005J15628_1009050013300001589MarineMTRETDQIVQDYSAMLGSVSVITNVIDDSNEFCNDMTTAEK
JGI25127J35165_102921513300002482MarineMAESEARSDEQKAQDYSAMLGSVSVITNCLDDDDDFCSDMTSA
JGI25132J35274_104377823300002483MarineMAESEXRSERSDEQKAQDYSAMLGSVSVITNCLDDDNDFCNDMT
JGI25128J35275_102416413300002488MarineMAESEARSDEQKAKDYSAMLGSVSVITNCLDDDDDFCSDMTSAEKKE
Ga0072334_1038588813300005086WaterMAESVERSDEQKAQDYSAMLGGVSVITNCLDDDNEFCNDMT
Ga0075441_1006318623300006164MarineMSREAAQIAQDHSALLGSVSVITNVIDDDNEFCNDMTLAEK
Ga0075441_1029184213300006164MarineMAREAAQIAQDHSALLGSVSVITNVIDDDNEFCNDMTLAEK
Ga0075445_1004591223300006193MarineMAREAAQIAQDHSAMLGSVSVITNVIDDDNEFCNDM
Ga0098048_103334113300006752MarineMAESVERSDEQKAQDYSAMLGSVSVITNCLDDDNDFCKDMTGE
Ga0098048_121285513300006752MarineMAESEARSDEQKAQDYSAMLGSVSVITNCLDDDND
Ga0098055_124490813300006793MarineMAESEARSDEQKAQDYSAMLGGVSVITNCLDDDNEFCND
Ga0070748_118859823300006920AqueousMAESVERSDEQIAQDYSAMLGSVSVITNCLDDDNEFCNDMTS
Ga0098041_124151323300006928MarineMSEETTRSDEQKAQDYSAMLGSVSVITNCLDDDNDFCN
Ga0098036_108138823300006929MarineMAESEARSDEQKAQDYSAMLGSVSVITNCLDDDNDF
Ga0075444_1005779713300006947MarineMAREEAQIAQDHSAMLGSVSVITNVIDDNNEFCND
Ga0098046_109140723300006990MarineMAESEARSDEQKAQDYSAMLGSVSVITNCLDDDNDFCN
Ga0070747_126091423300007276AqueousMSRDADQIAQDYSAMLGSVSVITNCLDDDNEFCNDMTSAE
Ga0070747_132124813300007276AqueousMAESEARSDEQIAQDYSAMLGSVSVITNCLDDDNEF
Ga0099849_102779233300007539AqueousMARDADQIAQDHAAMLGSVSVITNVIDDDNDFCNDM
Ga0114904_102007123300008218Deep OceanMARDADQIAQDYSAMLGSVSVITNCLDDDNEFCNDMTS
Ga0114910_107166523300008220Deep OceanMARDADQIAQDYSAMLGSVSVITNCLDDDNEFCNDMTSAEKKE
Ga0114910_107185313300008220Deep OceanMSREADQIAQDYSAMLGSVSVITNCLDDDNEFCNDMT
Ga0114910_111618623300008220Deep OceanMSRDADQIAQDYSAMLGSVSVITNCLDDDNEFCNDMTSAEKKE
Ga0114910_119316623300008220Deep OceanMAREADQIAQDYSAMLGSVSVITNCLDDDNEFCNDMTSA
Ga0114908_108492623300009418Deep OceanMAREADQIAQDYSAMLGSVSVITNCLDDDNDFCNDMTSAEKKE
Ga0114908_113684213300009418Deep OceanMSREADQIAQDYSAMLGSVSVITNCLDDDNEFCNDMTSAE
Ga0114915_109055313300009428Deep OceanMERETAQIAQDYSAMLGSVSVITNVIDDSNEFCNDM
Ga0114915_122063913300009428Deep OceanMARDAEQIAQDHSAMLGSVSVITNVIDDSNDFCNDMTLAEKKERVA
Ga0114914_107505513300009601Deep OceanMAREAAQIAQDYSAMLGSVSVITNVLDADNKFCNDMTNDEKQE
Ga0114906_122076123300009605Deep OceanMSRDADQIAQDYSAMLGSVSVITNCLDDDNDFCNDMT
Ga0098049_108520413300010149MarineMAESVERSDEQKAQDYSAMLGSVSVITNCLDDDNEFCSDMTSAEK
Ga0181417_106464123300017730SeawaterMAESETRSDEQKAQDYSAMLGSVSVITNCLDDNNEFCN
Ga0181417_116103923300017730SeawaterMAESETVERSDEQKAQDYSAMLGSVSVITNCLDDDNEFCNDMTSAEKKER
Ga0181397_106949813300017744SeawaterMSRDADQIAQDYSAMLGSVSVITNCLDDDNDFCNDMTSAEKK
Ga0181427_114924623300017745SeawaterMAREDAQIAQDYSAMLGSVSVITNCLDDSNEFCNDMTSA
Ga0187219_123130223300017751SeawaterMAESETRSDEQIAQDYSAMLGSVSVITNCLDDDDDFCSDMTSA
Ga0181411_115399713300017755SeawaterMARDADQIAQDYSAMLGSVSVITNCLDDDNDFCNDMTSAEKKERV
Ga0181385_106530023300017764SeawaterMAREADQIAQDYSAMLGSVSVITNCLDDNNEFCNDMT
Ga0181406_103910423300017767SeawaterMAESETRSDEQKAQDYSAMLGSVSVITNCLDDSNE
Ga0181406_122114813300017767SeawaterMAESEARSDEQKAQDYSAMLGSVSVITNCLDDADDFCNDMTS
Ga0181386_126838713300017773SeawaterMAESEARSDEQIAQDYSAMLGSVSVITNCLDDDDDFCSDMTSAEKKE
Ga0181380_117053723300017782SeawaterMARDADQIAQDYSAMLGSVSVITNCLDDNNEFCNDM
Ga0181563_1052847623300018420Salt MarshMAESVERSDEQKAQDYSAMLGSVSVITNCLDDDNDFCNDMTGEEKK
Ga0222715_1020977113300021960Estuarine WaterMTDRTDEQIAQDYSAMLGSVSVITNVLDDDNDFGSDMTTD
Ga0224906_106383223300022074SeawaterMAREADQIAQDYSAMLGSVSVITNCLDDDNEFCNDMTSAE
Ga0196887_103774023300022178AqueousMSEETTRSDEQKAQDYSAMLGSVSVITNCLDDDNEFCNDMTSAE
Ga0255773_1033278213300022925Salt MarshMAESVERSDEQKAQDYSAMLGSVSVITNCLDDDNEFCNDMTGEEKKE
Ga0255752_1009508923300022929Salt MarshMAESEVVERSDEQKAQDYSAMLGSVSVITNCLDDDNDFCNDMTGEEKKE
Ga0228657_107211923300024314SeawaterMTDRTADQIAQDYSAMLGSVSVITNVLDDDNDFGSDMTTDEK
Ga0208159_105129813300025101MarineMAESVERSDEQKAQDYSAMLGSVSVITNCLDDDNDFCNDMTGEE
Ga0209348_111056213300025127MarineMAESEARSDEQKAQDYSAMLGSVSVITNCLDDDNDFCNDMTSAEKK
Ga0208919_116256923300025128MarineMAESVERSDEQKAQDYSAMLGSVSVITNCLDDDNDFCNDMTGE
Ga0209336_1007779213300025137MarineMTRETDQIAQDYSAMLGSVSVITNVIDDSNEFCNDMTTAEK
Ga0209336_1007789223300025137MarineMTRETDQVAQDYSAMLGSVSVITNVIDDSNEFCNDMTTAEK
Ga0209336_1014782713300025137MarineMTRETDQMAQDYSAMLGSVSVITNVIDDSNEFCNDMTTAEK
Ga0209756_104919713300025141MarineMAESVERSDEQKAQDYSAMLGSVSVITNCLDDDNEFCN
Ga0209645_103505513300025151MarineMAESVERSDEQKAQDYSAMLGSVSVITNCLDDDNDFCN
Ga0209337_116971113300025168MarineMTDRTADQIAQDYSAMLGSVSVITNVLDDDNDFGSDMT
Ga0208031_101891113300025237Deep OceanMARKTAQIAQDYSAMLSSVSVITNVIDDSNEFCNDMTTAEKKARV
Ga0208032_106070823300025266Deep OceanMAREAAQIAQDYSAMLGSVSVITNVLDADNKFGNEKT
Ga0208180_112929523300025277Deep OceanMSRDADQIAQDYSAMLGSVSVITNCLDDDNDFCNDMTSAEKKER
Ga0208030_110466413300025282Deep OceanMSREADQIAQDYSAMLGSVSVITNCLDDDNEFCNDMTSAEKK
Ga0208030_111824513300025282Deep OceanMAREADQIAQDYSAMLGSVSVITNCLDDDNEFCNDMTS
Ga0208303_100907023300025543AqueousMAESEAVERSDEQKAQDYSAMLGSVSVITNCLDDDN
Ga0208134_103097513300025652AqueousMAESVERSDEQKAQDYSAMLGSVSVITNCLDDDNDFCK
Ga0208150_110142723300025751AqueousMAESVERSDEQKAQDYSAMLGSVSVITNCLDDDNDF
Ga0208899_103673213300025759AqueousMAESEARSDEQKAQDYSAMLGSVSVITNCLDDDNEFCSDMT
Ga0208645_114092113300025853AqueousMTRETDQIAQDYSAMLGSVSVITNVIDDSNEFCNDMTTAEKKER
Ga0247587_105248023300026504SeawaterMTDRTADQIAQDYSAMLGSVSVITNVLDDDNDFGSDMTTDEKKRTCGT
Ga0209071_106394413300027686MarineMSRETAQIAQDHSAMLGSVSVITNVIDDDNEFCNDMTLAEKKERV
Ga0209279_1005206623300027771MarineMARETAQIAQDYSAMLSSVSVITNVIDDSNEFCND
Ga0256382_109224613300028022SeawaterMTDRTTEELAQDYSAMLGSVSVITNCLDDNNDFCNDM
Ga0183748_101791413300029319MarineMAESEARSDEQKAQDYSAMLGSVSVITNCLDDSNEFCN
Ga0183757_100816323300029787MarineMAREADQIAQDYSAMLGSVSVITNCLDDDNEFCND
Ga0183757_101117613300029787MarineMSRDADQIAQDYSAMLGSVSVITNCLDDDNDFCKDMTSAEKKE
Ga0183757_104268313300029787MarineMSREADQIAQDYSAMLGSVSVITNCLDDDNEFCNDMTSAEKKE
Ga0307488_1065942113300031519Sackhole BrineMARETDQIAQDYSAMLGSVSVITNVIDDSNEFCNDMTTDE
Ga0308019_1001964313300031598MarineMERETAQIAQDYSAMLGSVSVITNVIDDSNEFCNDMTTAEKKAR
Ga0308019_1005430523300031598MarineMARETAQIAQDYSAMLGSVSVITNVIDDSNEFCNDMTTAEKKAR
Ga0308007_1019963823300031599MarineMARETDQIAQDHSAMLGSVSVITNVIDDDNEFCNDM
Ga0302121_1021946813300031626MarineMAREADQIAQDYSAMLGSVSVITNVIDDDNDFCNDMTTDEKK
Ga0302118_1030567323300031627MarineMARDADQIAQDHAAMLGSVSVITNVIDDDNDFCNDL
Ga0308004_1018707413300031630MarineMARDAAQIAQDHSAMLGSVSVITNVIDDDNEFCNDLDLAGKKE
Ga0307986_1003262213300031659MarineMTRDAEQIAQDHSAMLGSVSVITNVIDDDNDFCNDMT
Ga0302122_1033736013300031675MarineMARDADQIAQDHSAMLGSVSVITNVIDDDNDFCNDLDLAGKKERVA
Ga0307995_106149523300031696MarineMARDADQIAQDYSAMLGSVSVITNVIDDDNEFCNDMTTDEKK
Ga0307998_116356913300031702MarineMERETAQIAQDYSAMLGSVSVITNVIDDSNEFCNDMTTAEKKARVARSMSYI

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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