NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F105913

Metagenome / Metatranscriptome Family F105913

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105913
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 37 residues
Representative Sequence MTNYNKDAVEKAISTSKKPISKKEAKLIHALLKGHK
Number of Associated Samples 82
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 86.67 %
% of genes near scaffold ends (potentially truncated) 1.00 %
% of genes from short scaffolds (< 2000 bps) 4.00 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (94.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(36.000 % of family members)
Environment Ontology (ENVO) Unclassified
(69.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(90.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.81%    β-sheet: 0.00%    Coil/Unstructured: 67.19%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00145DNA_methylase 3.00
PF03237Terminase_6N 2.00
PF03592Terminase_2 2.00
PF00476DNA_pol_A 1.00
PF13538UvrD_C_2 1.00
PF02794HlyC 1.00
PF13539Peptidase_M15_4 1.00
PF01653DNA_ligase_aden 1.00
PF00004AAA 1.00
PF01381HTH_3 1.00
PF03796DnaB_C 1.00
PF01521Fe-S_biosyn 1.00
PF12728HTH_17 1.00
PF07486Hydrolase_2 1.00
PF12705PDDEXK_1 1.00
PF05565Sipho_Gp157 1.00
PF05866RusA 1.00
PF00478IMPDH 1.00
PF13481AAA_25 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 3.00
COG3728Phage terminase, small subunitMobilome: prophages, transposons [X] 2.00
COG0272NAD-dependent DNA ligaseReplication, recombination and repair [L] 1.00
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 1.00
COG0316Fe-S cluster assembly iron-binding protein IscAPosttranslational modification, protein turnover, chaperones [O] 1.00
COG0749DNA polymerase I, 3'-5' exonuclease and polymerase domainsReplication, recombination and repair [L] 1.00
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 1.00
COG2994ACP:hemolysin acyltransferase (hemolysin-activating protein)Posttranslational modification, protein turnover, chaperones [O] 1.00
COG3773Cell wall hydrolase CwlJ, involved in spore germinationCell cycle control, cell division, chromosome partitioning [D] 1.00
COG4570Holliday junction resolvase RusA (prophage-encoded endonuclease)Replication, recombination and repair [L] 1.00
COG4841Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF familyFunction unknown [S] 1.00


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A94.00 %
All OrganismsrootAll Organisms6.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000117|DelMOWin2010_c10103729All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-91035Open in IMG/M
3300001450|JGI24006J15134_10009324Not Available4891Open in IMG/M
3300006749|Ga0098042_1018353Not Available2081Open in IMG/M
3300009550|Ga0115013_10029700Not Available2947Open in IMG/M
3300009786|Ga0114999_10003310Not Available20312Open in IMG/M
3300020246|Ga0211707_1018385Not Available988Open in IMG/M
3300020404|Ga0211659_10070114All Organisms → Viruses1640Open in IMG/M
3300020408|Ga0211651_10021606All Organisms → Viruses3097Open in IMG/M
3300020469|Ga0211577_10001815All Organisms → cellular organisms → Bacteria20247Open in IMG/M
3300022072|Ga0196889_1041226All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-9913Open in IMG/M
3300022821|Ga0222673_1001005Not Available10394Open in IMG/M
3300025071|Ga0207896_1000552All Organisms → cellular organisms → Bacteria7642Open in IMG/M
3300025137|Ga0209336_10002350Not Available8991Open in IMG/M
3300027859|Ga0209503_10023701Not Available2743Open in IMG/M
3300029319|Ga0183748_1003692Not Available7873Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine36.00%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous14.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine11.00%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh7.00%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater7.00%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean5.00%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water3.00%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine2.00%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine2.00%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.00%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine1.00%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater1.00%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.00%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine1.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.00%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine1.00%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.00%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.00%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake1.00%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water1.00%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.00%
Pond SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Pond Soil1.00%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001352Pelagic Microbial community sample from North Sea - COGITO 998_met_07EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300005825Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.184_BBBEnvironmentalOpen in IMG/M
3300005912Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKDEnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006305Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0025mEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006749Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007609Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MGEnvironmentalOpen in IMG/M
3300007668Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_A_D2_MGEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300008963Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R1_B_H2O_MGEnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009550Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 MetagenomeEnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017952Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020207Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020246Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX555934-ERR599105)EnvironmentalOpen in IMG/M
3300020400Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)EnvironmentalOpen in IMG/M
3300020404Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)EnvironmentalOpen in IMG/M
3300020408Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118)EnvironmentalOpen in IMG/M
3300020436Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300021323Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R9.63AS (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300022176Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022821Saline water microbial communities from Ace Lake, Antarctica - #801EnvironmentalOpen in IMG/M
3300024062 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_1EnvironmentalOpen in IMG/M
3300024343Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fractionEnvironmentalOpen in IMG/M
3300025071Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)EnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025101Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025301Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025880Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)EnvironmentalOpen in IMG/M
3300026097Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027714Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027859Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300029318Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289EnvironmentalOpen in IMG/M
3300029319Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516EnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031785Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MGEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOWin2010_1010372943300000117MarineMTNYNKDAVEKAISTSKKPISKKEAKLIHALLKGHK*
JGI20157J14317_1003362773300001352Pelagic MarineMAYNKDAVNSAIATSRKPVSSKEVKLIHSLLKGHS*
JGI24006J15134_1000932433300001450MarineMTDYNKDAVEKAISTSKKPISKKEAKLIHALLKGNK*
JGI24006J15134_1000941443300001450MarineMYNKKSIDKAIKASSKPISKKETKLIHALLKGHWSKSK*
JGI24003J15210_10004827113300001460MarineMANYEKTAVDKAIATSKKPISKKEAKLIHALLKGHKK*
JGI24004J15324_1002007023300001472MarineVNTYNKEAVEKAIKTSRKPISKKEAKLIHALLKGRKL*
JGI24004J15324_1002037043300001472MarineMENISYNKKSIDKAINASKKPIKKKEAKLIHALLKGHAK*
JGI24004J15324_1003479343300001472MarineMTNYNKDAVDKAIKTSNQPISKKEAKLIHALLKGNK*
JGI24005J15628_1002931033300001589MarineMTTYNKDSVTKAIKADKTIGKKEAKLIHAILKGHGK*
JGI24005J15628_1004916143300001589MarineVSKVIYDKEAVQKAIELSRKPISKSELKLIHALLKGHSK*
Ga0074476_114245023300005825Sediment (Intertidal)MSYNKEAVEKAIKTSRKPISGKEAKLIHALLKGRK*
Ga0075109_107337423300005912Saline LakeMSTYNKESVEKAIKASSKPISKKEGKLIHKLLKGHS*
Ga0070743_1006716123300005941EstuarineMAYNKDAVDKAIATSRKPISGKEAKLIHALLKGRK*
Ga0075466_100196573300006029AqueousMSKYNEKAVEKAIKSSKKPIKTKEAKLIHKLLKGHSR*
Ga0075441_1008820623300006164MarineMYNKKSIDKAIKVSNKPISKKETKLIHALLKGHWSKSK*
Ga0068468_1000617423300006305MarineMTNYDKNAVDKAIATSTKPISKKEAKLIHALLKGNK*
Ga0098038_100908963300006735MarineMANYDKTAVDKAIATSKKPISKKEAKLIHALLKGNKK*
Ga0098037_102759523300006737MarineMTNYDKDAVDKAITTSTKPISKKEAKLIHALLKGNK*
Ga0098042_101835333300006749MarineMNKYNKKAVENLIKQDKSISKKEAKLIHALLKGRN*
Ga0098042_106635213300006749MarineMNKYNKKAVRKLIKQDKSISKKEAKLIHALLKGRN*
Ga0098042_114455923300006749MarineMTNYDKDAVDKAIATSTKPISKKEAKLIHALLKGNK*
Ga0070749_10025667113300006802AqueousMSEYNKEAVEKAIKSSSKPISKKEAKLIHALLKGRS*
Ga0070750_1031647823300006916AqueousMTNYNKDAVEKAISTSKKPISKKEAKLIHALLKGH
Ga0070747_112523833300007276AqueousMSTYKKESVEKAIKSSAKPISKKEGKLIHKLLKGH
Ga0099849_117382633300007539AqueousMANYDKDAVDKAIKTSSKPISKKEAKLIHALLKGHSNG*
Ga0099848_108486823300007541AqueousMAYNKDAVDQAIATSRKPISGKEAKLIHALLKGRK*
Ga0099848_116667333300007541AqueousMATYNKEAVDQAIKTSRQPISKKEARLIHALLKGRKAQG
Ga0102945_101451623300007609Pond WaterMAYNKDAVDNTIANSRKPVSSKEAKLIRALLKGHS*
Ga0102935_131404813300007668Pond SoilMAYNKHSVDRAISTSRKPVSGKEAKLIHKLLKGHSK*
Ga0099850_115516023300007960AqueousMAYNKDAVDRAIATSRKPISGKEAKLIHALLKGRG*
Ga0114905_110149413300008219Deep OceanPRKMTVYNKAAVEKAIQKDKTISKKDAKLIHALLKGHQKQNL*
Ga0114910_122279023300008220Deep OceanMTVYNKAAVEKAIQKDKTISKKDAKLIHALLKGHQKQNL*
Ga0102930_100975293300008963Pond WaterMMYNADSVEKAIQTSSKPISKKQGKLIHALLKGHATQ*
Ga0114915_103740653300009428Deep OceanMYNKKSIDKAIKASSKPISKKETKLIHALLKGHLNR*
Ga0114915_113447613300009428Deep OceanKMYNKKSIDKAIKASSKPISKKETKLIHALLKGHLIRSKTK*
Ga0114932_1001924173300009481Deep SubsurfaceMRTYNKEAVEKAIKTSPIPISKKEAKLIHALLKGRTNTK*
Ga0115003_1021516523300009512MarineMYNKKSIDKAIKVSSKPISKKEAKLIHALLKGYRSKLK*
Ga0115013_1002970083300009550MarineMKNKYNKEAVDRVIKQDKTISKKEAKLIHSLLKGNY*
Ga0115013_1148021223300009550MarineMNNKYNKQAVDKLIKRDKSISKKEAKLIHELLKGR
Ga0115011_1005387453300009593MarineMTNYDKAAVDKAIATSTKPISKKEAKLIHALLKGNK*
Ga0115011_1029960123300009593MarineMANYNKAAVDKAIATSSKPISKNEAKLIHSLLKKGNK*
Ga0114999_10003310433300009786MarineMNGYNKDAVTKEITKDPSISKKGAKLIHALLKGRG*
Ga0115012_1108752923300009790MarineMTNYNKAAVDKAIATSSKPISKNEAKLIHSLLKKGNK*
Ga0098043_119163133300010148MarineMTNYDKEAVDKAITTSTKPISKKEAKLIHALLRGNK*
Ga0129351_130827023300010300Freshwater To Marine Saline GradientRGALNMSTYNKESVEKAIKSSAKPISKKEGKLIHKLLKGHS*
Ga0160423_1004671923300012920Surface SeawaterMKNKYNKEAVDRVIEQDKTISKKEAKLIHALLKGKL*
Ga0181391_115472123300017713SeawaterKMTDYNKDAVEKTIQKDKTISKKDAKLIHALLKEHQK
Ga0181412_115966323300017714SeawaterMANYNKDAVDKAIKTSKQPISKKEAKLIHALLKGYK
Ga0181383_105696123300017720SeawaterMTDYNKDAVEKTIQKDKTISKKDAKLIHALLKGHQKQNF
Ga0181398_112374833300017725SeawaterMKNISYNKKSIDKAINASKKPIKKKEAKLIHALLKGHAK
Ga0181382_106670623300017756SeawaterMTDYNKDAVEKAIQKDKTISKKYAKLIHALLKGHQK
Ga0181565_1000200523300017818Salt MarshMAYNKESVNRAIATSRKPISGKEAKLIHALLKGRG
Ga0181565_10021036163300017818Salt MarshMSYNKEAVEKAIATSRKPISGKEAKLIHALLKGRK
Ga0181565_1014895143300017818Salt MarshMATYNKEAVDEAIKSSNKFGQKITKKEAKLIHALLKGRGK
Ga0181565_1060343043300017818Salt MarshFNEKGNVMAAYDKAAVDKAIKTSSKPISKKEAKLIHALLKGRSNG
Ga0181583_1076179313300017952Salt MarshMAAYDKAAVDKAIKTSSKPISKKEAKLIHALLKGRSNG
Ga0181592_1007443523300018421Salt MarshMSYNKESVDKAIATSRKPISGKEAKLIHALLKGRG
Ga0181570_1010687713300020207Salt MarshMSNYDQAAVDKAIKTSSKPISKKEAKLIHALLKGRSNG
Ga0211707_101838513300020246MarineMKNKYNKEAVDKLIKRDKSISKKEAQLIHALLKGNH
Ga0211636_1041180423300020400MarineMKNKYDKKAVDKLIKLDKSISKKKAKLIHALLKGRN
Ga0211659_1007011423300020404MarineMNKYNKKAVENLIKQDKSISKKEAKLIHALLKGRN
Ga0211651_1002160673300020408MarineMKNKYNKEAIDRAIKQDKTISKKQAKSIHALLKGNY
Ga0211708_1023820323300020436MarineMKNKYNKEAVDRAIKQDKTISKKEAKLIHSLLKGNY
Ga0211577_10001815273300020469MarineMTDYNKDAVEKTIQKDKTISKKDAKLIHALLRGHQKQNF
Ga0210295_118180243300021323EstuarineMSYNKEAVEKAIKTSRKPISGKEAKLIHALLKGRK
Ga0213858_1001920333300021356SeawaterMSYNKESVNKAIATSRKPISGKEAKLIHALLKGRG
Ga0212030_102310423300022053AqueousMSKYNEKAVEKAIKSSKKPIKTKEAKLIHKLLKGHSR
Ga0196889_104122623300022072AqueousMTNYNKDAVEKAISTSKKPISKKEAKLIHALLKGHK
Ga0224906_101029273300022074SeawaterMENISYNKKSIDKAINASKKPIKKKEAKLIHALLKGHAK
Ga0212031_100798143300022176AqueousMSEYNKEAVEKAIKSSSKPISKKEAKLIHALLKGRS
Ga0212031_108337623300022176AqueousMAYNKDAVDQAIATSRKPISGKEAKLIHALLKGRK
Ga0222673_1001005103300022821Saline WaterMSTYNKESVEKAIKASSKPISKKEGKLIHKLLKGHS
(restricted) Ga0255039_1008087123300024062SeawaterMSTYNKESVEKAIKSSAKPISKKEGKLIHKLLKGHS
Ga0244777_10000660233300024343EstuarineMAYNKDAVDKAIATSRKPISGKEAKLIHALLKGRK
Ga0207896_100055283300025071MarineMTDYNKDAVEKAISTSKKPISKKEAKLIHALLKGNK
Ga0208157_106849623300025086MarineMANYDKTAVDKAIATSKKPISKKEAKLIHALLKGNKK
Ga0208159_109493413300025101MarineMNKYNKKAVRKLIKQDKSISKKEAKLIHALLKGRN
Ga0209535_116591833300025120MarineMYNKKSIDKAIKASSKPISKKETKLIHALLKGHWSKSK
Ga0209232_104260833300025132MarineMANYNKDAVDKAIKTSKQPISKKEAKLIHALLKGHK
Ga0209336_1000235043300025137MarineMTNYNKDAVDKAIKTSNQPISKKEAKLIHALLKGNK
Ga0209336_1003218633300025137MarineVNTYNKEAVEKAIKTSRKPISKKEAKLIHALLKGRKL
Ga0209336_1015634123300025137MarineMTNYNKEAVEKAIKTSRKPISKKEAKLIHALLKGRKV
Ga0209634_1003071203300025138MarineMTTYNKDSVTKAIKADKTIGKKEAKLIHAILKGHGK
Ga0209634_1008641103300025138MarineMANYEKTAVDKAIATSKKPISKKEAKLIHALLKGHKK
Ga0209645_103289413300025151MarineMANYNKDAVDKAIKTSKQPISKKEAKLIHALLKGNK
Ga0209337_128219813300025168MarineMYNKKSIDKAIKASSKPISKKETKLIHALLKGHLIRSKIK
Ga0208450_113725823300025301Deep OceanMTVYNKAAVEKAIQKDKTISKKDAKLIHALLKGHQKQNL
Ga0208134_111787813300025652AqueousMSTYKKESVEKAIKSSAKPISKKEGKLIHKLLKGHS
Ga0208162_120229423300025674AqueousMANYDKDAVDKAIKTSSKPISKKEAKLIHALLKGHSNG
Ga0209534_1004134393300025880Pelagic MarineMAYNKDAVNSAIATSRKPVSSKEVKLIHSLLKGHS
Ga0209953_101224443300026097Pond WaterMAYNKDAVDNTIANSRKPVSSKEAKLIRALLKGHS
Ga0209815_123451623300027714MarineMYNKKSIDKAIKVSNKPISKKETKLIHALLKGHWSKSK
Ga0209503_1002370163300027859MarineMNNKYNKQAVDKLIKRDKSISKKEAKLIHELLKGRN
Ga0209404_1013990843300027906MarineMTNYDKAAVDKAIATSTKPISKKEAKLIHALLKGNK
Ga0209404_1061116423300027906MarineMANYNKAAVDKAIATSSKPISKNEAKLIHSLLKKGNK
Ga0185543_104398723300029318MarineMTNYDKDAVDKAIATSTKPISKKEAKLIHALLKGNK
Ga0183748_1003692103300029319MarineMKNKYNKEAIDRAIKQDKTISKKEAKLIHALLKGNY
Ga0183757_101394333300029787MarineMTPYNKEAVEKAIKKSKETISTKEAKIIHALLKGHQSTEGK
Ga0307488_1084340923300031519Sackhole BrineMYNKKSIDKAIKVSSKPISKKEAKLIHALLKGYRSKLK
Ga0310343_1002410143300031785SeawaterMTNYDKNAVDKAIATSTKPISKKEAKLIHALLKGNK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.