Metagenome / Metatranscriptome Family F105903

Basic Information
Family ID	F105903
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	112 residues
Representative Sequence	MNHAQKINDLYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCSPPTERGWTKFSDIKLCNAINVSMDAILIDETMQREVNMRHILKILSYFSESMVMA
Number of Associated Samples	92
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	4.00 %
% of genes from short scaffolds (< 2000 bps)	4.00 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (30.000 % of family members)
Environment Ontology (ENVO)	Unclassified (51.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (90.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 83.18% β-sheet: 0.00% Coil/Unstructured: 16.82%
Feature Viewer

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Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF02954	HTH_8	3.00
PF01981	PTH2	3.00
PF13392	HNH_3	2.00
PF04434	SWIM	1.00
PF00004	AAA	1.00
PF01180	DHO_dh	1.00
PF04055	Radical_SAM	1.00
PF00089	Trypsin	1.00
PF03783	CsgG	1.00
PF01176	eIF-1a	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG1990	Peptidyl-tRNA hydrolase	Translation, ribosomal structure and biogenesis [J]	3.00
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	1.00
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	1.00
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	1.00
COG0361	Translation initiation factor IF-1	Translation, ribosomal structure and biogenesis [J]	1.00
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	1.00
COG1462	Curli biogenesis system outer membrane secretion channel CsgG	Cell wall/membrane/envelope biogenesis [M]	1.00
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	1.00
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	1.00
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	1.00
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	1.00

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300004448\|Ga0065861_1028689	Not Available	1560	Open in IMG/M
3300010149\|Ga0098049_1150535	Not Available	719	Open in IMG/M
3300017757\|Ga0181420_1063988	Not Available	1165	Open in IMG/M
3300019459\|Ga0181562_10435211	Not Available	629	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.00%
Host-Associated	Host-Associated	1.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.00%
Algae	Host-Associated → Algae	1.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	96.00%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	3.00%
Green Algae	Host-Associated → Algae → Green Algae	1.00%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	33.00%
Coastal	Environmental → Aquatic → Marine → Coastal	20.00%
Strait	Environmental → Aquatic → Marine → Strait	18.00%
Oceanic	Environmental → Aquatic → Marine → Oceanic	10.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified	8.00%
Pelagic	Environmental → Aquatic → Marine → Pelagic	4.00%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	3.00%
Inlet	Environmental → Aquatic → Marine → Inlet	2.00%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.00%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	1.00%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	30.00%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	20.00%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	18.00%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	10.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	8.00%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	4.00%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	3.00%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	2.00%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.00%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.00%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.00%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	30.00%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	18.00%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	9.00%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	9.00%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	8.00%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.00%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	3.00%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	2.00%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.00%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.00%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.00%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.00%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.00%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.00%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.00%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.00%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.00%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.00%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	1.00%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	1.00%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	1.00%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	1.00%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352018	Saline water microbial communities from Qinghai Lake, Tibetan Plateau -Sample 11630	Environmental	Open in IMG/M
3300000949	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94	Host-Associated	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300003216	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA	Environmental	Open in IMG/M
3300003410	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_153SG_22_DNA	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007778	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009447	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300012525	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300016766	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041409AS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016791	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017751	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)	Environmental	Open in IMG/M
3300020177	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020352	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556084-ERR599144)	Environmental	Open in IMG/M
3300020365	Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX555943-ERR599143)	Environmental	Open in IMG/M
3300020388	Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300022909	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300023084	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300023237	Saline water microbial communities from Ace Lake, Antarctica - #367	Environmental	Open in IMG/M
3300024192	Seawater microbial communities from Monterey Bay, California, United States - 47D	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024326	Seawater microbial communities from Monterey Bay, California, United States - 64D	Environmental	Open in IMG/M
3300024420	Seawater microbial communities from Monterey Bay, California, United States - 40D	Environmental	Open in IMG/M
3300025083	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025840	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026513	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 51R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027714	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)	Environmental	Open in IMG/M
3300027751	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713 (SPAdes)	Environmental	Open in IMG/M
3300027771	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)	Environmental	Open in IMG/M
3300028008	Seawater microbial communities from Monterey Bay, California, United States - 1D_r	Environmental	Open in IMG/M
3300028128	Seawater microbial communities from Monterey Bay, California, United States - 57D	Environmental	Open in IMG/M
3300028391	Seawater microbial communities from Monterey Bay, California, United States - 24D	Environmental	Open in IMG/M
3300031569	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2	Environmental	Open in IMG/M
3300031639	Marine microbial communities from Western Arctic Ocean, Canada - AG5_32.2	Environmental	Open in IMG/M
3300031656	Marine microbial communities from water near the shore, Antarctic Ocean - #67	Environmental	Open in IMG/M
3300031676	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_20m	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
QLA_00075370	2199352018	Saline Water	MNYAQKINSLYEVAESNFVTLQERLEKAIAKSPQFKAQLEAVVDEFRRRNCMPPCERGWTQFLDIKLCRAIQVSMDSILIDETMQRELNMRHILKIL
BBAY94_101954171	3300000949	Macroalgal Surface	MNTHAQKINSLYEVATSNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCSPPTVRGWTKFSDINLCSAIQVPFNKIQIDETMQREVNMRHILKILSYFSESMVMAIQVYEDPDNPGMYIAWD
JGI24004J15324_101110941	3300001472	Marine	MPVTENKMKTQAQKINDLYEVAESNFVTLQERLEKAIXKAPFFRSQXEAVVDEFKRRNCSPPAVRGWTKFSDINICQSIQVSMNAILIDETMQRELNMRHILGILSNFSESMVMAIQVYKDPNRPDNYIAW
JGI26079J46598_10250761	3300003216	Marine	MNTYAQKINSLYDVATSNFVTLQERLNKALNKAPFFTAQLDAVVDEFKRRNCMPPCERGWTKFADINLCNAIQVPFNKIQIDETMQRELNMRHILKILSYFSESMVMAIQVYEDPENPDNYIAWDGQHTAIAL
JGI26086J50260_10561423	3300003410	Marine	MNNYAQKINDLYDVSESNFVTLQERLEKAIAKAPQYKAQLEAVVDEFRRRNCMPPCERGWTQFSDIKLCTAIQVSMDSILIDETMQRELNIRH
Ga0055584_1019852591	3300004097	Pelagic Marine	MNTYAQKMNSSYEVAESNFVTLSERLAKAISKAPFFRGQLEAVVDEFKRRNCNPPTERGWTKFSDIGICESIQVPFDKILIDETMQRELNMRHILKILSYFSETMVMAINV
Ga0065861_10286891	3300004448	Marine	MNTHAQKINSLYEVAASNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCSPPTERGWTKFANINLCSAIQVPFNKIQIDETMQREVNMRHILKILSYFSESMVMAIQVYEDPDNPDNYIAWDGQHTSIALHIILT
Ga0075478_101846101	3300006026	Aqueous	MNTHAQKINSLYEVATSNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCSPPTVRGWTKFADINLCNAIQVPFNTILIDETMQREVNMRHILKILSYFSESMVM
Ga0075441_101294941	3300006164	Marine	MNNHAQKINDLYDVSESNFVTLQERLEKAIAKSPQFKAQLEAVVDEFRRRNCSPPAARGWTAFEQIKLCCAIQVSMDCILIDETMQRELNMRHILKILSYFSESMVM
Ga0098038_10980381	3300006735	Marine	MNYAQKINSLYEVNTSNFVTLQERLEKAIAKAPQFKAQLEAVVDEFRRRNCSPPTERGWEQFADIKLCQGMSCSMDAILIDETMQRELNIRHILKILSYFSESMVMAIQVYEDPQRPGKYIAWDGQHTIIALFII
Ga0075476_102554991	3300006867	Aqueous	MNHAQKINDLYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCSPPTERGWVKFTDIKLCNAINVSMDAILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDPERPGKYIAWDGQHTSI
Ga0075481_100648656	3300006868	Aqueous	MNHAQKINDLYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCSPPTERGWVKFTDIKLCNAINVSMDAILIDETMQREVNMRHILKI
Ga0070750_103477702	3300006916	Aqueous	MNTYAQKVNSSYEVAESNFVTLSERLAKAISKAPFFRGQLEAVVDEFKRRNCNPPTERGWTKFSDIGICESIHVPFDKILIDETMQRELNMRHILKILSYFSGSMVMAIQVYRD
Ga0070747_12397391	3300007276	Aqueous	MNNHAQKINDLYDVSESNFVTLQERLEKAIAKSPQFKAQLEAVVDEFRRRNCSPPTERGWVKFTDIKLCNAINVSMDAILIDETMQREVNMRHILKILSYFSESMVMAIQV
Ga0102954_11958042	3300007778	Water	MENIMNTHAQKINALYEVAESNFVTLQERLNKALNKAPFFTAQLDAVVDEFKRRNCMPPCERGWTKFADINLCNAIQVPFNKIQIDETMQRELNMRHILKILSYFSESMVMAIQVYEDPE
Ga0075480_102171411	3300008012	Aqueous	MEKIMNTHAQKINSLYEVATSNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCSPPTVRGWTKFADINLCSAIQVPFNKIQIDETMQREVNMRHILKILSYFSESMVMAIQVYEDP
Ga0115545_12340212	3300009433	Pelagic Marine	MNHAQKINDLYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCSPPTERGWERFTDIKLCNAINVSMDCILIDETMQREVNMRHILKILSYFSE
Ga0115560_11189041	3300009447	Pelagic Marine	MSDTKEKQMNYAQKINYLYDVSESNFVTLQERLYKAIAKSPQFKAQLEAVVDEFRRRNCMPPCERGWTQFEDIKLCTAIQVSMDSILIDETMQRELNMRHILKILSYFSESMVMAVQVY
Ga0115571_11026294	3300009495	Pelagic Marine	MNHAQKINDLYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCMPPCERGWTKFLDIKLCNAINVSMDCILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDPERPGKYIAWDGQHTSI
Ga0098049_11505352	3300010149	Marine	MYKENKMNHAQKINDLYNVKTSNFVTLQERLEKAVAKAPQFRAQLEAVVDEFRRRNCNPPTERGWEKFSDIKLCNAINVSMDAILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDPERPGKYIAWDGQHTSIALFI
Ga0098056_10173246	3300010150	Marine	MNHAQKINDLYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCSPPTERGWTKFSDIKLCNAINVSMDAILIDETMQREVNMRHILKILSYF
Ga0129353_16064152	3300012525	Aqueous	MKRRSKMSTYAQKMNSLYDVAASNFVTLSERLTKAIGKALFFRGQLEAVVDEFRRRNCSPPTERGWVKFTDIKLCNAINVSMDAILIDETMQREV
Ga0163180_101846951	3300012952	Seawater	MNYAQKINSLYEVNTSNFVTLQERLEKAIAKAPQFKAQLEAVVDMFRRRNCSPPTERGWEQFADIKLCKGMSCSMDAILIDETMQRELNIRHILKSNY*
Ga0182091_13679881	3300016766	Salt Marsh	MNTHAQKINSLYEVATSNFVTLQERLEKALNKAPFFKSQLEAVVDEFRRRNCSPPTARGWTKFADINLCQAIQVPFNTILIDETMQREVNMRHILKILSYFSES
Ga0182095_11304591	3300016791	Salt Marsh	MNTYAQKINSLYDVATSNFVTLQVRLNKALAKAPFFTAQLDAVVDEFKRRNCMPPCERGWTKFADINLCQAIQVPFNTILIDETMQRE
Ga0180120_103515781	3300017697	Freshwater To Marine Saline Gradient	MNNHAQKINDLYDVSESNFVTLQERLEKAIAKSPQFKAQLEAVVDEFRRRNCMPPCERGWTQFTDIKLCTAIQVSMDCILIDETMQRELNMRHI
Ga0181369_10876441	3300017708	Marine	MNYAQKINSLYEVNTSNFVTLQERLEKAIAKAPQFKAQLEAVVDEFRRRNCSPPTERGWEQFADIKLCQGMSASMDAILIDETMQRELNIRHILKILTYFSESMVMAIQVYE
Ga0181391_10526261	3300017713	Seawater	MNHAQKINDLYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCSPPTERGWTKFSDIKLCNAINVSMDAILIDETMQREVNMRHILKILSYFSESM
Ga0181402_11486612	3300017743	Seawater	MKTQAQKVNDLYEVAESNFVTLQQRLEKALSKAPFFRSQLEAVVDEFRRRNCKPPTTRGWTKFSDINLCDAIPVSFDKILIDETMQREVNMRHILKILTHFSESIDR
Ga0187219_10410133	3300017751	Seawater	MNTHAQKINSLYEVSTSNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCSPPTVRGWTKFADINICEAIQVPFNKIQIDETMQREVNMRHILKI
Ga0187219_11713001	3300017751	Seawater	MNTHAQKINSLYEVAESNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCSPPTVRGWTKFADINLCQAIQVPFNKIQIDETMQREVNMRHI
Ga0181407_11674501	3300017753	Seawater	MNYAQKINSLYEVNTSNFVTLQERLEKAIAKAPQFKAQLEAVVDMFRRRNCSPPTERGWEQFADIKLCQGMSCSMDAILIDETMQRELNIRHILKILSYFSESMVMAIQVYEDPQRPGKYIA
Ga0181411_10057591	3300017755	Seawater	MNTHAQKINSLYEVSTSNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCSPPTVRGWTKFADINICEAIQVPFNKIQIDETMQRELNMRHILKILSYFSESMVMAIQVYED
Ga0181420_10639883	3300017757	Seawater	MNYAQKINSLYEVNTSNFVTLQERLEKAIAKAPQFKAQLEAVVDMFRRRNCSPPTERGWEQFADIKLCQGMSCSMDAILIDETMQRELNIRHILKILSYFSESMVMAIQVYEDPQRPGKYIAWDGQHTIIALFIILTK
Ga0181422_11970831	3300017762	Seawater	MNYAQKINSLYEVNTSNFVTLQERLEKAIAKAPQFKAQLEAVVDMFRRRNCTPPTERGWEQFADIKLCKGMSASMDAILIDETMQRELNIRHILKILTSLL
Ga0181410_11474392	3300017763	Seawater	MNTHAQKINSLYEVSTSNFVTLQERLEKALAKAPFFKAQLEAVVDEFRRRNCMPPCERGWTKFTDIALCNAIQVPFNRIQIDETMQREVNMRHILKILSY
Ga0181413_12385992	3300017765	Seawater	MNTHAQKINSLYEVAESNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCSPPTVRGWTKFADINLCQAIQVPFNKIQIDETMQREVNMRHILKILSYFSESMVMA
Ga0181406_11123511	3300017767	Seawater	MNTHAQKINSLYEVSTSNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCSPPTVRGWTKFADINICEAIQVPFNKIQIDETMQREVNMRHILKILSYFSESMVMA
Ga0187221_12300731	3300017769	Seawater	MNHAQKINDLYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCSPPTERGWTKFSDIKLCNAINVSMDAILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDPERPGKY
Ga0181430_11190201	3300017772	Seawater	MNYAQKINSLYEVNTSNFVTLQERLEKAIAKAPQFKAQLEAVVDMFRRRNCSPPTERGWGQFADIKLCQGMSCSMDAILIDETMQRELNIRHILKILSYFSESMVMAIQV
Ga0181386_10738903	3300017773	Seawater	MKTQAQKVNDLYEVAESNFVTLQQRLEKALSKAPFFRSQLEAVVDEFRRRNCKPPTTRGWTKFSDINLCDAIPVSFDKILIDETMQREVNMRHILKILTHFSE
Ga0181395_12170272	3300017779	Seawater	MKTQAQKVNDLYEVAESNFVTLQQRLEKALSKAPFFRSQLEAVVDEFRRRNCKPPTTRGWTKFSDINLCDAIPVSFDKILIDETMQREVNMRHILKILTHFSESMVMAIHS
Ga0181379_10057181	3300017783	Seawater	MNYAQKINSLYEVNTSNFVTLQERLEKAIAKAPQFKAQLEAVVDMFRRRNCTPPTERGWEQFADIKLCKGMSASMDAILIDETMQRELNIRHILKILTYFSE
Ga0181379_11421571	3300017783	Seawater	MNHAQKINELYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCSPPTERGWEKFTDIKLCNAINVSMDCILIDETMQREVNMRHILKILSYFSESMVMAIQVYED
Ga0181424_100860111	3300017786	Seawater	MKTQAQKVNDLYEVAESNFVTLQQRLEKALSKAPFFRSQLEAVVDEFRRRNCKPPTTRGWTKFSDINLCDAIPVSFDKILIDETMQREVNM
Ga0181565_103338154	3300017818	Salt Marsh	MNTHAQKVNSSYEVAESNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCNPPTERGWEKFADIQIAKAIQVPFNTILIDETMQRELNMRHILKILSYFSESMVMAI
Ga0181607_102638421	3300017950	Salt Marsh	MNTHAQKINSLYEVATSNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCSPPTERGWTKFADINLCNAIQVPFNTILIDETMQREVNMR
Ga0181571_104593111	3300017957	Salt Marsh	MNTHAQKVNSSYEVAESNFVTLQERLEKALAKAPFFKSHLEAVVDTFRRRNCNPPTERGWTKFADIQIAKAIQVPFNTILIDETMQRELNMRHIL
Ga0181590_110707712	3300017967	Salt Marsh	MNHAQKINDLYNVKTSNFVTLQQRLEKAIAKAPQFRAQLEAVVDEFRRRNCMPPAERGWTKFQDIKLCNAIQVSMDCILIDETMQREVNM
Ga0181587_105679741	3300017968	Salt Marsh	MNTHAQKVNSSYEVAESNFVTLQERLEKALAKAPFFKSHLEAVVDTFRRRNCNPPTERGWTKFADIQIAKAIQVPFNTILIDETMQRELNMRHILKIL
Ga0181585_107017501	3300017969	Salt Marsh	MNTHAQKVNSSYEVAESNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCNPPTERGWEKFADIQIAKAIQVPFNTILIDETMQRE
Ga0181585_108323871	3300017969	Salt Marsh	MSTYAQKMNSLYEVAASNFVTLSERLTKAIGKAPFFRGQLEAVVDEFKRRNCSPPTERGWTKFSDIALCNAIQVPFDKILIDETMQRELNMRHILKI
Ga0181606_103887673	3300018048	Salt Marsh	MKVKFDRYPRARCPLMETLMNTYAQKINSLYDVATSNFVTLQVRLNKALAKAPFFTAQLDAVVDEFKRRNCMPPCERGWTKFADINLCNAIQVPFNKIQIDETMQRELNMRHIL
Ga0181572_109429161	3300018049	Salt Marsh	MNTHAQKINSLYEVATSNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCSPPTERGWTKFADINLCNAIQVPFNTILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDESRPGHYIAWDGQHT
Ga0181563_104163211	3300018420	Salt Marsh	MPVTENKMKTQAQKINDLYEVAESNFVTLQQRLEKALNKAPFFRSQLEAVVDEFRRRNCKPPTTRGWTKFSDINLCDAIPVSFDKILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDESRPGHYIAWDGQHT
Ga0181563_107997501	3300018420	Salt Marsh	MNTHAQKVNNLYEVAESNFVTLQQRLEKALNKAPFFRSQLEAVVDTFRRRNCNPPTARGWTKFSDINLCSAIEVSFDKILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDEAR
Ga0181592_100635401	3300018421	Salt Marsh	MNTHAQKINSLYEVATSNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCSPPTVRGWTKFADINLCNAIQVPFNTILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDENRPGHYIAWDGQHTSIAL
Ga0181592_106324941	3300018421	Salt Marsh	MSNYAQKMNSLYEVAASNFVTLSERLTKAIGKAPFFRGQLEAVVDEFKRRNCSPPTERGWTKFSDIALCNAIQVPFDKILIDETMQRELNMRHILKILSYFSESMVMAIQVYEDD
Ga0181591_101895094	3300018424	Salt Marsh	MNTHAQKINSLYEVATSNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCSPPTVRGWTKFADINLCNAIQVPFNTILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDENRPGH
Ga0181591_104683053	3300018424	Salt Marsh	MNTYAQKVNSSYEVAESNFVTLSERLAKAISKAPFFRGQLEAVVDEFKRRNCNPPTERGWTKFSDIGICESIHVPFDKILIDETMQRELNMRHILKILSYFSGT
Ga0181591_105831662	3300018424	Salt Marsh	MSNYAQKMNSLYEVAASNFVTLSERLTKAIGKAPFFRGQLEAVVDEFKRRNCNPPTERGWTKFSDIALCNAIQVPFDKILIDETMQRELNMRHIL
Ga0181566_111899752	3300018426	Salt Marsh	MNYAQKINDLYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCNPPTERGWEKFSDINLCNAIDVSMDAILIDETMQREVNMRHILKILSYFSESMVMAIQV
Ga0181568_112484322	3300018428	Salt Marsh	MNTHAQKVNSSYEVAESNFVTLQERLEKALAKAPFFKSHLEAVVDTFRRRNCNPPTERGWTKFADIQIAKAIQVPFNTILIDETMQRELNMRHILKILSNFSESMVMAIQVYEDE
Ga0181564_103129773	3300018876	Salt Marsh	MNTHAQKVNNLYEVAESNFVTLQQRLEKALNKAPFFRSQLEAVVDTFRRRNCNPPTARGWTKFSDINLCSAIEVSFDKILIDETMQREVNMRHILKILSYFSESMVMAIQVYED
Ga0181564_104106072	3300018876	Salt Marsh	MNTHAQKINSLYEVATSNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCSPPTARGWTKFADINLCQAIQVPFNTILIDETMQREV
Ga0181562_104352112	3300019459	Salt Marsh	MNTHAQKVNNLYEVAESNFVTLQQRLEKALNKAPFFRSQLEAVVDTFRRRNCNPPTARGWTKFSDINLCSAIEVSFDKILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDESRPGHYIAWDGQHTSIALHIILT
Ga0181602_103083382	3300020173	Salt Marsh	MKVKFDRYPRARCPLMETLMNTYAQKINSLYDVATSNFVTLQVRLNKALAKAPFFTAQLDAVVDEFKRRNCMPPCERGWTKFADINLCSAIQVPFNKIQIDETMQRELNMRHILKILSYFSESMVMAIQVY
Ga0181596_103397172	3300020177	Salt Marsh	MKVKFDRYPRARCPLMETLMNTYAQKINSLYDVATSNFVTLQVRLNKALAKAPFFTAQLDAVVDEFKRRNCMPPCERGWTKFADINLCNAIQVPFNKIQIDETMQRELNMRHILKILSYFSESMVMAIQVY
Ga0206131_101597203	3300020185	Seawater	MSDTKEKQMNYAQKINDLYDVSESNFVTLQERLDKAIAKSPQFKAQLEAVVDEFRRRNCMPPCERGWTQFEDIKLCTAIQVSMDSILIDETMQRELNMRHILKILSYFSES
Ga0211505_10573461	3300020352	Marine	MYKENKMNHAQKINDLYNVKTSNFVRLQERLEKAVAKAPQFRAQLEAVVDEFRRRNCNPPTERGWEKFSDIKLCNAINVSMDAILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDPERPGKYIAWD
Ga0211506_10255286	3300020365	Marine	MNYAQKINNLYEVSTSNFVTLQERLEKAIAKAPQFKAQLEAVVDEFRRRNCSPPTERGWKEFSDIKLCQGMSASMDAILIDETMQRELNIRHILKILTYFSESMVMAIQVYEDPER
Ga0211678_103715962	3300020388	Marine	MNYAQKINSLYEVNTSNFVTLQERLEKAIAKAPQFKAQLEAVVDMFRRRNCTPPTERGWEQFADIKLCQGMSCSMDAILIDETMQRELNIRHILKILSYFSESMVMAIQVYEDPQRPGKYIAWDGQHTI
Ga0213858_105848222	3300021356	Seawater	MKRGSKMSTYAQKMNSLYDVAASNFVTLNERLTKAIGKAPFFRGQLEAVVDEFKRRNCNPPTERGWTKFSDIALCNAIQVPFDKILIDE
Ga0222716_103945391	3300021959	Estuarine Water	MNTHAQKINALYEVAESNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCSPPTVRGWTKFADINLCQAIQVPFNKIQIDETMQREVNMRHILKILSYFSESMVMAIQVYEDPDNPGMYIAWDGQHTSIALH
Ga0255755_11592432	3300022909	Salt Marsh	MNTHAQKVNSSYEVAESNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCNPPTERGWEKFADIQIAKAIQVPFNTILIDETMQRELNMRHILKILSYFSESMVMAIQVYEDEARPGNYIAW
Ga0255773_102085981	3300022925	Salt Marsh	MNTHAQKINSLYEVATSNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCSPPTARGWTKFADINLCQAIQVPFNTILIDETMQREVNMRHILKILSYFSESM
Ga0255778_103254951	3300023084	Salt Marsh	MNYAQKINDLYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCNPPTERGWEKFSDINLCNAIDVSMDAILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDPERPGKYIAWDGQHTS
(restricted) Ga0233432_104444801	3300023109	Seawater	MNHAQKINDLYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCSPPTERGWTKFSDIKLCNAINVSMDAILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDPEQ
Ga0255772_102661213	3300023176	Salt Marsh	MSTYAQKMNSLYEVAASNFVTLSERLTKAIGKAPFFRGQLEAVVDEFKRRNCSPPTERGWTKFSDIALCNAIQVPFDKILIDETMQRELNMRHIL
Ga0255768_103210893	3300023180	Salt Marsh	MNTHAQKINSLYEVATSNFVTLQERLEKALAKAPFFKSQLEAVVDEFRRRNCSPPTVRGWTKFADINLCNAIQVPFNTILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDEN
Ga0222650_10119551	3300023237	Saline Water	MNNHAQKINDLYDVSESNFVTLQERLEKAIAKSPQFKAQLEAVVDEFRRRNCSPPAARGWTEFKQIGLCKAIQVIMDCILIDETMQRELNMRHILKILSYFSESMVMSIQVY
Ga0228637_10024301	3300024192	Seawater	MNHAQKINDLYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCSPPTERGWTKFSDIKLCNAINVSMDAILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDPERPGKYIAWDGQHT
(restricted) Ga0233438_100338469	3300024255	Seawater	MNHAQKINELYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCSPPTERGWEKFTDIKLCNAINVSMDAILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDPERPGK
Ga0228652_10120201	3300024326	Seawater	MNHAQKINDLYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCMPPAERGWTKFSDIKLCNAINVSMDAILIDETMQREVNMRHILK
Ga0228632_100252310	3300024420	Seawater	MNHAQKINDLYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCSPPTERGWTKFSDIKLCNAINVSMDAILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDPERPGKYIAWDGQHTSIALF
Ga0208791_10677852	3300025083	Marine	MNHAQKINELYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCSPPTERGWEKFTDIKLCNAINVSMDCILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDENRPG
Ga0208793_10565704	3300025108	Marine	MNHAQKINELYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCSPPTERGWEKFTDIKLCNAINVSMDCILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDPERPGKYIAWDGQHTSIALYII
Ga0208150_12174122	3300025751	Aqueous	MNTYAQKINSLYEVATSNFVTLQVRLNKALAKAPFFTAQLDAVVDEFKRRNCMPPCERGWTKFADINLCNAIQVPFNKIQIDETMQRELNMRHILKILSYFSESMVMAIQVYEDPENPGNYIAWDGQHTAIALHII
Ga0208917_11192683	3300025840	Aqueous	MNHAQKINDLYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCSPPTERGWKKFTDIKLCNAINVSMDAILIDETMQREVNMRHILKILSYFSESM
Ga0247590_10375494	3300026513	Seawater	MNHAQKINDLYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCSPPTERGWTKFSDIKLCNAINVSMDAILIDETMQREVNMRHILKILSYFSESMVMAIQVYEDPERPGKYIAWDGQHTSI
Ga0209815_10389701	3300027714	Marine	MKTQAQKINDLYEVAESNFVTLQERLEKAILKAPFFRSQLEAVVDEFKRRNCSPPAVRGWTKFSDINICQSIQVSMNAILIDETMQRELNMRHILSILTKFSESMVMAIQVYRDPNKPDNYIAWDGQHTIIALY
Ga0208304_103523221	3300027751	Estuarine	MNNHAQKINDLYDVSESNFVTLQERLEKAIAKSPQFKLQLEAVVDEFRRRNCMPPCERGWTQFTDIKLCNAINVSMDCILIDETMQRELNMRHILKILSYFSESMVMAVQVYEDPSRPGK
Ga0209279_100156521	3300027771	Marine	MKTQAQKINDLYEVAESNFVTLQERLEKAILKAPFFRSQLEAVVDEFKRRNCSPPAVRGWTKFSDINICQSIQVSMNAILIDETMQRELNMRHILSILTKFSESMVMAIQVYRDPNKPDNYIAWDGQHT
Ga0228674_10436331	3300028008	Seawater	MNHAQKINDLYNVKTSNFVTLQERLEKAIAKAPQFRAQLEAVVDEFRRRNCSPPTERGWTKFSDIKLCNAINVSMDAILIDETMQREVNMRHILKILSYFSESMVMA
Ga0228645_11359732	3300028128	Seawater	MNYAQKINSLYEVNTSNFVTLQERLEKAIAKAPQFKAQLEAVVDEFRRRNCSPPTERGWKEFSDIKLCQGMSASMDAILIDETMQRELNIRHILKILSYFSESMVMAIQVY
Ga0233394_11144911	3300028391	Seawater	MNYAQKINSLYEVNTSNFVTLQERLEKAIAKAPQFKAQLEAVVDEFRRRNCSPPTERGWKEFSDIKLCQGMSASMDAILIDETMQRELNI
Ga0307489_109688662	3300031569	Sackhole Brine	MNNHAQKINDLYDVSESNFVTLQERLEKAIAKSPQFKAQLEAVVDEFRRRNCSPPAQRGWTEFKQIKLCTAMSASMDCILIDETMQRELNMRHILKILSYFSETMVMAIQV
Ga0302117_102825132	3300031639	Marine	MNNHAQKINDLYDVSESNFVTLQERLEKAIAKSPQFKAQLEAVVDEFRRRFCSPPAQRGWTEFKQIKLCTAMSASMDCILIDETMQRELNMRHIL
Ga0308005_100549351	3300031656	Marine	MNNHAQKINDLYDVSESNFVTLQERLEKAIAKSPQFKAQLEAVVDEFRRRNCSPPAARGWTEFKQIGLCKAIQVSMDCILIDETMQRELNMRHILKILSYFSESMVMAIQVY
Ga0302136_11102561	3300031676	Marine	MNNHAQKINDLYDVSESNFVTLQERLEKAIAKSPQFKAQLEAVVDEFRRRNCSPPAQRGWTEFKQIKLCTAMSASMDCILIDETMQRELNMRHILKILSYFSETMVMAIQVYED

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F105903

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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