NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F105838

Metagenome Family F105838

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105838
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 70 residues
Representative Sequence MISNNITIQSGVLPSLLQELETLGISIHHLDYLNDSGELDNLADNLKQQFMEEIREMEEQGLFINPGGG
Number of Associated Samples 68
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 49.00 %
% of genes near scaffold ends (potentially truncated) 24.00 %
% of genes from short scaffolds (< 2000 bps) 72.00 %
Associated GOLD sequencing projects 61
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (70.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(24.000 % of family members)
Environment Ontology (ENVO) Unclassified
(28.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 41.24%    β-sheet: 0.00%    Coil/Unstructured: 58.76%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF05552TM_helix 4.00
PF08734GYD 3.00
PF01925TauE 2.00
PF12846AAA_10 2.00
PF00561Abhydrolase_1 2.00
PF07366SnoaL 2.00
PF00694Aconitase_C 1.00
PF16795Phage_integr_3 1.00
PF00589Phage_integrase 1.00
PF12681Glyoxalase_2 1.00
PF13453zf-TFIIB 1.00
PF02735Ku 1.00
PF00753Lactamase_B 1.00
PF11387DUF2795 1.00
PF10996Beta-Casp 1.00
PF14947HTH_45 1.00
PF00958GMP_synt_C 1.00
PF06197DUF998 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0668Small-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 4.00
COG3264Small-conductance mechanosensitive channel MscKCell wall/membrane/envelope biogenesis [M] 4.00
COG4274Uncharacterized conserved protein, contains GYD domainFunction unknown [S] 3.00
COG0730Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 familyInorganic ion transport and metabolism [P] 2.00
COG0519GMP synthase, PP-ATPase domain/subunitNucleotide transport and metabolism [F] 1.00
COG1273Non-homologous end joining protein Ku, dsDNA break repairReplication, recombination and repair [L] 1.00
COG3371Uncharacterized membrane proteinFunction unknown [S] 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A70.00 %
All OrganismsrootAll Organisms30.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664021|ICCgaii200_c0559125Not Available548Open in IMG/M
2228664021|ICCgaii200_c0561928Not Available654Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c2329583Not Available1167Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_14425744Not Available933Open in IMG/M
3300000787|JGI11643J11755_11490812Not Available785Open in IMG/M
3300000858|JGI10213J12805_10228675Not Available1584Open in IMG/M
3300000953|JGI11615J12901_13306609Not Available822Open in IMG/M
3300003321|soilH1_10081766All Organisms → cellular organisms → Archaea → TACK group2171Open in IMG/M
3300003321|soilH1_10177509Not Available2432Open in IMG/M
3300003324|soilH2_10099813Not Available1102Open in IMG/M
3300003373|JGI25407J50210_10005476All Organisms → cellular organisms → Archaea3122Open in IMG/M
3300003373|JGI25407J50210_10038451Not Available1228Open in IMG/M
3300004463|Ga0063356_103386047Not Available687Open in IMG/M
3300006049|Ga0075417_10110278Not Available1255Open in IMG/M
3300006169|Ga0082029_1512892All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis4597Open in IMG/M
3300006169|Ga0082029_1644112All Organisms → cellular organisms → Archaea3479Open in IMG/M
3300006844|Ga0075428_100039443Not Available5198Open in IMG/M
3300006844|Ga0075428_100164278All Organisms → cellular organisms → Archaea2408Open in IMG/M
3300006845|Ga0075421_101607136Not Available707Open in IMG/M
3300006845|Ga0075421_102794411Not Available502Open in IMG/M
3300006846|Ga0075430_100043435All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota3798Open in IMG/M
3300006846|Ga0075430_100435233Not Available1082Open in IMG/M
3300006847|Ga0075431_100043900All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota4611Open in IMG/M
3300006847|Ga0075431_100954627Not Available825Open in IMG/M
3300006853|Ga0075420_101609175Not Available557Open in IMG/M
3300006853|Ga0075420_101815462All Organisms → cellular organisms → Archaea521Open in IMG/M
3300006876|Ga0079217_10009120All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera3122Open in IMG/M
3300006880|Ga0075429_100372756Not Available1250Open in IMG/M
3300006894|Ga0079215_11383369Not Available549Open in IMG/M
3300006969|Ga0075419_10988847Not Available611Open in IMG/M
3300007004|Ga0079218_10015693All Organisms → cellular organisms → Archaea3940Open in IMG/M
3300007004|Ga0079218_10381521Not Available1190Open in IMG/M
3300007004|Ga0079218_10924767Not Available861Open in IMG/M
3300009081|Ga0105098_10192493Not Available938Open in IMG/M
3300009094|Ga0111539_10152661All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae2703Open in IMG/M
3300009094|Ga0111539_10352270Not Available1713Open in IMG/M
3300009094|Ga0111539_11149038Not Available902Open in IMG/M
3300009100|Ga0075418_11330140Not Available779Open in IMG/M
3300009100|Ga0075418_12711754Not Available541Open in IMG/M
3300009146|Ga0105091_10213092Not Available923Open in IMG/M
3300009147|Ga0114129_11002219All Organisms → Viruses → Predicted Viral1052Open in IMG/M
3300009147|Ga0114129_12337221Not Available641Open in IMG/M
3300009156|Ga0111538_11237975Not Available943Open in IMG/M
3300009157|Ga0105092_10516529Not Available685Open in IMG/M
3300009789|Ga0126307_10046660All Organisms → cellular organisms → Archaea3379Open in IMG/M
3300009789|Ga0126307_10185810Not Available1667Open in IMG/M
3300009789|Ga0126307_10194754Not Available1626Open in IMG/M
3300009789|Ga0126307_10867716Not Available729Open in IMG/M
3300010036|Ga0126305_10678811Not Available696Open in IMG/M
3300010038|Ga0126315_10015967All Organisms → cellular organisms → Archaea3677Open in IMG/M
3300010038|Ga0126315_10031320All Organisms → cellular organisms → Archaea2768Open in IMG/M
3300010039|Ga0126309_10060783All Organisms → cellular organisms → Archaea1839Open in IMG/M
3300010039|Ga0126309_10790015Not Available619Open in IMG/M
3300010039|Ga0126309_11179386Not Available525Open in IMG/M
3300010040|Ga0126308_10009305All Organisms → cellular organisms → Archaea4874Open in IMG/M
3300010040|Ga0126308_10217989Not Available1231Open in IMG/M
3300010040|Ga0126308_10365538Not Available958Open in IMG/M
3300010041|Ga0126312_10024999All Organisms → cellular organisms → Bacteria → Terrabacteria group3986Open in IMG/M
3300010042|Ga0126314_10264499Not Available1222Open in IMG/M
3300010042|Ga0126314_10983797Not Available626Open in IMG/M
3300010044|Ga0126310_10184051Not Available1360Open in IMG/M
3300010044|Ga0126310_10464283Not Available917Open in IMG/M
3300010044|Ga0126310_11191407Not Available611Open in IMG/M
3300010045|Ga0126311_10276400All Organisms → cellular organisms → Archaea1256Open in IMG/M
3300012212|Ga0150985_106632434Not Available529Open in IMG/M
3300012469|Ga0150984_109034518Not Available510Open in IMG/M
3300013026|Ga0170681_1057760Not Available779Open in IMG/M
3300018432|Ga0190275_10047467Not Available3567Open in IMG/M
3300018466|Ga0190268_10157486Not Available1171Open in IMG/M
3300018466|Ga0190268_10391008Not Available889Open in IMG/M
3300018469|Ga0190270_10250018Not Available1542Open in IMG/M
3300018875|Ga0193608_1004082Not Available2941Open in IMG/M
3300018915|Ga0193591_1215354Not Available529Open in IMG/M
3300018933|Ga0193614_1034932All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp.1429Open in IMG/M
3300018939|Ga0193593_1000404All Organisms → cellular organisms → Archaea14576Open in IMG/M
3300019132|Ga0193604_1020047Not Available1064Open in IMG/M
3300019132|Ga0193604_1032485All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp.775Open in IMG/M
3300024430|Ga0196962_10016146Not Available2233Open in IMG/M
3300024430|Ga0196962_10060247Not Available1152Open in IMG/M
3300027637|Ga0209818_1048742Not Available1020Open in IMG/M
3300027691|Ga0209485_1183886Not Available643Open in IMG/M
3300027886|Ga0209486_10047904All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera2128Open in IMG/M
3300027907|Ga0207428_10990850Not Available591Open in IMG/M
3300027909|Ga0209382_10016579All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera8986Open in IMG/M
3300027909|Ga0209382_11577660Not Available650Open in IMG/M
3300028705|Ga0307276_10002868Not Available2594Open in IMG/M
3300028722|Ga0307319_10288683Not Available542Open in IMG/M
3300030496|Ga0268240_10013090All Organisms → cellular organisms → Archaea → TACK group1455Open in IMG/M
3300031548|Ga0307408_100094275All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera2266Open in IMG/M
3300031731|Ga0307405_10948003All Organisms → cellular organisms → Archaea731Open in IMG/M
3300031824|Ga0307413_10050508All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera2499Open in IMG/M
3300031852|Ga0307410_10050251All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp.2803Open in IMG/M
3300031901|Ga0307406_10056705Not Available2510Open in IMG/M
3300031903|Ga0307407_10269521Not Available1174Open in IMG/M
3300031995|Ga0307409_100184865Not Available1849Open in IMG/M
3300031995|Ga0307409_100577719All Organisms → cellular organisms → Archaea1107Open in IMG/M
3300032004|Ga0307414_10330525Not Available1301Open in IMG/M
3300032004|Ga0307414_11189725Not Available706Open in IMG/M
3300032126|Ga0307415_100227012Not Available1501Open in IMG/M
3300034402|Ga0334960_062343Not Available529Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere24.00%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil20.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere11.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil8.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.00%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil6.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment3.00%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil3.00%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest2.00%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil2.00%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Sub-Biocrust SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil1.00%
RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Rock1.00%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.00%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.00%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000787Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000858Soil microbial communities from Great Prairies - Wisconsin Native Prairie soilEnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300003373Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300013026Gypsum rock hypoendolithic microbial communities from the Atacama Desert, Chile - Cordon de LilaEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018875Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 49.5 hrs after wetting v1EnvironmentalOpen in IMG/M
3300018915Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 0 min after wetting v1EnvironmentalOpen in IMG/M
3300018933Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1EnvironmentalOpen in IMG/M
3300018939Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 9 hrs after wetting v1EnvironmentalOpen in IMG/M
3300019132Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 49.5 hrs after wetting v1EnvironmentalOpen in IMG/M
3300024430Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20EnvironmentalOpen in IMG/M
3300027637Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300030496Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300034402Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 56SNSEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICCgaii200_055912512228664021SoilMISNNLTIQSGVLPSLLQELETLGISIHHLDYLNDSGELYNLADNLKQQFMEEMRQMEEQGLFINPGGG
ICCgaii200_056192812228664021SoilMISNNLTIQSGVLPSLLQELETLGISIHHLDYLNDSGELDNLADNLKQQFMEEMRQMEEQGLFINPGGG
ICChiseqgaiiDRAFT_232958333300000033SoilMISNNLTIQSGVLPSLLQELETLGISIHHLDYLNDSGELDNLAENLKQQFMEEIREMEEQGLFINPGGG*
ICChiseqgaiiFebDRAFT_1442574433300000363SoilMISNNITIQSGVLPSLLQELETLGISIHHLDYLNDSGELDNLAENLKQQFMEEIREMEEQGLFINPGGG*
JGI11643J11755_1149081223300000787SoilMISNNITIQSGVLPSLLQELETLGISIHHLDYLNDSGELXNLADNLKQQFMEEMRQMEEQGLFINPGGG*
JGI10213J12805_1022867523300000858SoilMISNNIAIHGGILPSLVQELESLGISINHIHHLNDNRELYHLADNLKQEFMNEIREMEEQGLFVNPGGG*
JGI11615J12901_1330660933300000953SoilMASNNILLDRGGILPWLLQELNSLGISINHLHWLNNSRELYSLIENIKEDFLHEIRESEEQGL
soilH1_1008176643300003321Sugarcane Root And Bulk SoilMVSNNITIQRGILPSLLKELESLGISINHLHYLNNNRELYRLADNLKQGFMNEIRDCEEQGLFVNPGGG*
soilH1_1017750923300003321Sugarcane Root And Bulk SoilMVSKNIVTHVRVLPYLVQELESLGISINSLHPLNNNRELCHLAESLKQEYMNEIRDSEEQGIFVNPGGG*
soilH2_1009981333300003324Sugarcane Root And Bulk SoilMISKNIEIPGRVLPYLVQELESLGISINRLHPLNNNRELYHLSESLKQEFINEIKESEEQGIFVNPGG
JGI25407J50210_1000547663300003373Tabebuia Heterophylla RhizosphereMASNNILIDGDILPSLLQELKSLGISINHLDRLNNKGELDRLADNLKQDFMHEIRDSEERGIFVNPGGG*
JGI25407J50210_1003845113300003373Tabebuia Heterophylla RhizosphereMPMISNNIAIHGGILPSLLQELESLGISINHIHHLNDNRELYHLADNLKQEFMNEIREMEEQGLFVNPGGG*
Ga0063356_10338604713300004463Arabidopsis Thaliana RhizosphereMISNNITIQSGVLPSLLQELETLGISIHHLDYLNDSGELDNLADNLKQQFMEEIREMEEQGLFINPGGG*
Ga0075417_1011027843300006049Populus RhizosphereMPMISNNIAIHGGVLPSLVQELESLGISINHIHHLNDNRELYHLADNLKQEFMNEIREMEEQGLFVNPGGG*
Ga0082029_151289243300006169Termite NestMASDNILIDGEILPSLIQELNSLGISIDRLHQLNNSRELYHLADNLKQKFMHEIRSGEERGIFVNPGGG*
Ga0082029_164411263300006169Termite NestLISNNAVSRSVSRSLLQELETLGISIKHLDYLNDSRELDNLAENLKQEFMNEIREMEEQGLFVNPGGG*
Ga0075428_10003944313300006844Populus RhizosphereMPMISNNIAIHGDILPSLVQELESLGISINHIHHLNDNRELYHLADNLKQEFMNEIREMEEQGLFVNPGGG*
Ga0075428_10016427813300006844Populus RhizosphereMASNNILIDGDILPSLLQELKSLGISINHLHQLNNNRELYNLADNLKQAFLHKIRGSEEQGIFVNPGGA*
Ga0075421_10160713613300006845Populus RhizosphereMFFYRRNLTLLLASNVTCNNITIHDGVISPLLLELESLGISIKHVVDDLNDDKELDNLAYNLKQKFVKEVRKM
Ga0075421_10279441113300006845Populus RhizosphereVTSSNITIHGVLSPLVQELESLGISIKHIVDDLNDVNELDNLADNLKQKFVKEIRQMQEQGLFVNPGGG*
Ga0075430_10004343553300006846Populus RhizosphereMASNNILIDGDILPSLLQELKSLGISINHLHQLNNNRELYRLADNLKHAFLHKIRDSEEQGIFVNPGGA*
Ga0075430_10043523313300006846Populus RhizosphereVFFYLRNLTLHLTSNVTCNNITIHDGVLSPLLLELESLGISIKHVVDDLNDDKELDNLAYNLKQKFVKEVRKMEEQGLFVNPGGG*
Ga0075431_10004390053300006847Populus RhizosphereMPMISNNIAIHGGILPSLVQELESLGISINHIHHLNDNRELYHLADNLKQEFMNEIREMEEQGLFVNPGGG*
Ga0075431_10095462713300006847Populus RhizosphereMASNNILIDGDILPSLLQELNSLGISINNLHQLNNNRELYRLADNLKHAFLHKIRDSEEQGIFVNPGGA*
Ga0075420_10160917523300006853Populus RhizosphereMFFYRRNLTLLLASNVTCNNITIHDGVISPLLLELESLGISIKHVVDDLNDDKELDNLADNLKQKFVKEVRKMEEQGLFVNPGGG*
Ga0075420_10181546223300006853Populus RhizosphereVTINVTSSNITIHGVLSPLVQELESLGISIKHIVDDLNDVNELDNLADNLKQKFVKEIRQMQEQGLFVNPGGG*
Ga0079217_1000912023300006876Agricultural SoilVFFYLRNLTLPLASNVTCNNITIHDGVLSPLLLELESLGISIKHVVDDLSDDKELDNLADNLKQKFVKEVRKMEEQGLFVNPGGG*
Ga0075429_10037275643300006880Populus RhizosphereVTCNNITIHDGVLSPLLLELESLGISIKHVVDDLNDDKELDNLADNLKQKFVKEVRKMEEQGLFVNPGGG*
Ga0079215_1138336913300006894Agricultural SoilMISNNITIQSGVLPSLLQELETLGISIHHLDYLNDSGELDNLADNLKQQFMEEIREMEEQGFFINPGGG*
Ga0075419_1098884713300006969Populus RhizosphereCNSSTIHDGVLSPLLLELESLGISIKHVIDDLNDDKELDNLADNLKQKFVKEVRKMEEQGLFVNPGGG*
Ga0079218_1001569393300007004Agricultural SoilLHAITQGCYMISNNITIQSGVLPSLLQELETLGISIHHLDYLNDSGELDNLADNLKQQFMEEIREMEEQGLFINPGGG*
Ga0079218_1038152123300007004Agricultural SoilVSKRRNNVRRRKYSSRSSYPVFFYLRNLTLPLASNVTCNNITIHDGVLSPLLLELESLGISIKHVVDDLNDDKELDNLADNLKQKFVKEVRKMEEQGLFVNPGGG*
Ga0079218_1092476723300007004Agricultural SoilMASNNILMEEDILPSLLQELNSLGISINHLDQLNNNRELYHLADNLKHAFMHEIRDSEEQGIFVNPGGG*
Ga0105098_1019249313300009081Freshwater SedimentVTCNSITIHDGVLSPLLLELESLGISIKHVVDDLNDDKELDNLADNLKQKFVKEVSKMEEQGLFVNPGGG*
Ga0111539_1015266113300009094Populus RhizosphereMASNNILLDRGGILPWLLQELNSLGISINHLHWLNNSRELYSLVENLKQDFLHEIRESEEQGLFVNPGGG*
Ga0111539_1035227023300009094Populus RhizosphereMMISNNLTIQSGVLPSLLQELETLGISIHHLDYLNDSGELYNLADNLKQQFMEEIREMEEQGLFINPGGG*
Ga0111539_1114903813300009094Populus RhizosphereMIFTNIVPHRSILPTLLLGLESLGISIKHLDYMNGNRELYRVAENLKQEFMNEIMETKEQGLFVNPGGD*
Ga0075418_1133014013300009100Populus RhizosphereMISNNITIQSGVLPSLLQELETLGISIHHLDYLNDSGELENLADNLKQQFMEEIREMEEQGLFINPGGG*
Ga0075418_1271175413300009100Populus RhizosphereMASNNILIDGDILPSLLQELNSLGISINHLHQLNNNRELYRLADNLKHAFLHKIRDSEEQGIFVNPGGG*
Ga0105091_1021309223300009146Freshwater SedimentLTLPLASNVTCNSITIHDGVLSPLLLELESLGISIKHVVDDLNDDKELDNLADNLKQKFVKEVRKMEEQGLFVNPGGG*
Ga0114129_1100221913300009147Populus RhizosphereMASNNILIDGDILPSLLQELKSLGMSINHLHQLNNNRELYRLADNLKHAFIHEIRDSEEQGIFVNPGGG*
Ga0114129_1233722123300009147Populus RhizosphereMASNNILIDGDILPSLLQELNSLGISINHLHQLNNNRELYRLADNLKHAFLHKIRDSEEQGIFINPGGA*
Ga0111538_1123797513300009156Populus RhizosphereMISNNLTIQSGVLPSLLQELETLGISIHHLDYLNDSGELYNLADNLKQQFMEEMRQMEEQGLFINPGGG*
Ga0105092_1051652923300009157Freshwater SedimentVTCNSITIHDGVLSPLLLELESLGISIKHVVDDLNDDKELDNLADNLKQKFVKEVRKMEEQGLFVNPGGG*
Ga0126307_1004666023300009789Serpentine SoilMISNNITIQSGVLPSLLQELETLGISIHHLDYLNDSGELENLADNLKQQFMEEIREMKEQGLFINPGGG*
Ga0126307_1018581013300009789Serpentine SoilMISNNITIQSGVIPSLLQELETLGISINHLDYLNDSGELENLADNLKQQFMEEITEMKEQ
Ga0126307_1019475413300009789Serpentine SoilMISNNITIQSGVLPSLLQELETLGISIHHLDYLNDSGELENLADNLKQQFMEGIREMEEQGLFINPGGG*
Ga0126307_1086771613300009789Serpentine SoilMISNNIAIHGGVIPSLLQELEALLISINHLDYLNDNRELDNLANNLKQEFMNKIREMEEQGLFVNPVAVKLS*
Ga0126305_1067881113300010036Serpentine SoilNIAIHGGVIPSLLQELEALGISINHLDYLNDNRELDNLANNLKQEFMNKIREMEEQGLFVNPVAVKLS*
Ga0126315_1001596743300010038Serpentine SoilMISNNITIQSGVLPSLLQELETLGISIHHLDYLNDSGELENLADNLKQQFMEEITEMKEQGLFINPGGG*
Ga0126315_1003132043300010038Serpentine SoilMISNNIAIQSDILPSLLQELETLGISIHHLDYLNDSGELENLADNLKQQFMEEIREMEEQGLFINPGGG*
Ga0126309_1006078323300010039Serpentine SoilMHGGIPRSLIQELETLGISINHLDYLNDNTELDNLADNIKQEFMNEVKEMEEEGLFINPGGG*
Ga0126309_1079001523300010039Serpentine SoilMISNNLTIQGGVLPSLLQELETLGISIHHLDYLNDSGELENLADNLKQQFMEGIREMEE
Ga0126309_1117938613300010039Serpentine SoilMISNNIAIQSGILPSLLQELETLGISIHHLDYLNDSGELENLAGNLKQQFMEEIREMEE
Ga0126308_1000930533300010040Serpentine SoilMISNNIAIQSGILPSLLQELETLGISIHHLDYLNDSGELENLADNLKQQFMEEIREMEEQGLFINPGGG*
Ga0126308_1021798913300010040Serpentine SoilMISNNITIQSGVLPSLLQELETLGVSIHHLDYLNDSGELENLADNLKQQFMEEIREMKEQGLFINPGGG*
Ga0126308_1036553823300010040Serpentine SoilMISNNITIQSGVLPSLLQELETLGISIHHLDYLNDSGELENLADNLKQQFMEGIREMEEEGLFINPGGG*
Ga0126312_1002499923300010041Serpentine SoilMISNNITIQSGVIPSLLQELETLGISINHLDYLNDSGELENLADNLKQQFMEEIREMEEQGLFINPGGG*
Ga0126314_1026449913300010042Serpentine SoilITKRCYMISNNITIQSGVLPSLLQELETLGISIHHLDYLNDSGELENLADNLKQQFMEGIREMEEQGLFINPGGG*
Ga0126314_1098379713300010042Serpentine SoilMISNNITIQSGVIPSLLQELETLGISINHLDYLNDSGELENLADNLKQQFMEEIREMEEQGL
Ga0126310_1018405113300010044Serpentine SoilMAFNNILIDGDILPSLLQELNSLGISINHLDQLNNNRELYHLADNLKRAFMDEIRDSEEQGIFVNPGGG*
Ga0126310_1046428313300010044Serpentine SoilMISNNVTTQSGVLPSLLQELETLGISVHHLDYLNDSGELDNLVDNLKQQFMEEIKEMEEQGLFINPGGG*
Ga0126310_1119140713300010044Serpentine SoilMISNNVTVQSGILPSLLQELEALGISIHHHLDYLNDSGELENLADNLKQQFMEEIREMEEQGLFINPGGG*
Ga0126311_1027640023300010045Serpentine SoilMISNNVTIQSGILPSLLQELEALGISIHHLDYLNDSGELENLADNLKQQFMEEIREMEEQGLFINPGGG*
Ga0150985_10663243413300012212Avena Fatua RhizosphereRCDMISNNLTIQSGVLPSLLQELETLGISIHHLDYLNDSGELDNLADNLKQQYMEEIREMEEQGLFINPGGG*
Ga0150984_10903451813300012469Avena Fatua RhizosphereYMISNNITIQSGVLPSLLQELETLGISIHHLDCLNDSGELDNLADNLKQQFMEEIREMQEEGLFINPGGG*
Ga0170681_105776033300013026RockMISNNIAMHRGILPSLVQELESLGISINHIHHLNDNRELYHLADNLKQEFMNEIREMKEQGLFVNPGGG*
Ga0190275_1004746733300018432SoilVFFYLRKLTLPLASNVTCNNIAIHDGVLSPLLLELESLGISIKHVVDDLNDDKELDNLADNLKQKFVKEVRKMEEQGLFVNPGGG
Ga0190268_1015748613300018466SoilMISNNITIQSGVLPSLLQELETLGISIHHLDYLNDSGELENLADNLKQQFMEEIREMEEQGLFINPGGG
Ga0190268_1039100813300018466SoilVTCNRITIHDGVLSPLLLELESLGISIKHVVDDLNDDKELDNLADNLKQKFVKEVRKMEEQGLFVNPGGG
Ga0190270_1025001823300018469SoilVTCNSITIHDGVLSPLLLELESLGISIKHVVDDLNDDKELDNLADNLKQKFVKEVRKMEEQGLFVNPGGG
Ga0193608_100408233300018875SoilMHRGILPSLVQELESLGISINHIHHLNDNRELYHLADNLKQEFMNEIREMEEQGFFVNPGGG
Ga0193591_121535413300018915SoilMHRGILPSLVQELESLGISINHIHHLNDNRELYRLADNLKQEFMNEIREMEEQGLFVNPGGG
Ga0193614_103493223300018933SoilMISNNIAMHRGILPSLVQELESLGVSINHLHHLNDNRELYHLADNLKQEFMNEIREMEEQGFFVNPGGG
Ga0193593_100040483300018939SoilMISNNIAMHRGILPSLVQELESLGISINHIHHLNDNRELYHLADNLKQEFMNEIREMEEQGFFVNPGGG
Ga0193604_102004723300019132SoilMHRGILPSLLQELESLGISINHIHHLNDNRELYRLADNLKQEFMNEIREMEEQGLFVNPGGG
Ga0193604_103248523300019132SoilMHRGILPSLVQELESLGVSINHLHHLNDNRELYHLADNLKQEFMNEIREMEEQGFFVNPGGG
Ga0196962_1001614623300024430SoilMISNNITMHRGILPSLVQELESLGVSINHIDHLNDNRELYHLADNLKQEFMNEIREMEEQGLFVNPGGG
Ga0196962_1006024713300024430SoilMISNNIAIHGGIRPSLVQELESLGLSLTNLDYLNDSGELDNLTDNIKQEFMNEIREMEEQGFFVNLGGG
Ga0209818_104874213300027637Agricultural SoilVFFYLRNLTLPLASNVTCNNITIHDGVLSPLLLELESLGISIKHVVDDLNDDKELDNLADNLKQKFVKEVRKMEEQGLFV
Ga0209485_118388623300027691Agricultural SoilMISNNITIQSGVLPSLLQELETLGISIHHLDYLNDSGELDNLADNLKQQFMEEIREMEEQGLFINPGGG
Ga0209486_1004790423300027886Agricultural SoilVFFYLRNLTLPLASNVTCNNITIHDGVLSPLLLELESLGISIKHVVDDLNDDKELDNLADNLKQKFVKEVRKMEEQGLFVNPGGG
Ga0207428_1099085013300027907Populus RhizosphereMIFTNIVPHRSILPTLLLGLESLGISIKHLDYMNGNRELYRVAENLKQEFMNEIMETKE
Ga0209382_10016579103300027909Populus RhizosphereMPMISNNIAIHGDILPSLVQELESLGISINHIHHLNDNRELYHLADNLKQEFMNEIREMEEQGLFVNPGGG
Ga0209382_1157766013300027909Populus RhizosphereVTCNSSTIHDGVLSPLLLELESLGISIKHVVDDLNDDKELDNLADNLKQKFVKEVRKMEEQGLFVNPGGG
Ga0307276_1000286813300028705SoilMSSINCHMISNNIVVPEWILPSLLQDLESLGISINHLHYLNDNRELYRLAENLEQEFMNEIREAEEQGLFVN
Ga0307319_1028868313300028722SoilMISNNLTIQSGVLPSLLQELETLGISIHHLDYLNDSGELDNLADNLKQQFMEEIREMEEQGLFINPGGG
Ga0268240_1001309023300030496SoilMIFANIVPHRSILPPLLLDLESLGISINRLHHLNDNRELYCLAENLKQEFINKIRETEEQGLFVNPGGG
Ga0307408_10009427513300031548RhizosphereVTRNSITIHDGVLSLLLLELESLGISIKHVVDDLNDDKELDNLADNLKQKFVKEVRKMEEQGLFVNPGGG
Ga0307405_1094800323300031731RhizosphereMTIYGVLSPLVQELESLGISIKHIIDDLNDVNELDNLADNLKQKFVKEIREMQEQGLFVNPGGG
Ga0307413_1005050813300031824RhizosphereVTRNSITIHDGVLSLLLLELESLGISIKHVVDDLNDDKELDNLADNLKQKFVKEVRKMEEQGLFVNP
Ga0307410_1005025113300031852RhizosphereCYMISNNITIQSGVLPSLLQELETLGISINHLDYLNDSGELDNLADNLKQQFMEEIREMEEQGLFINPGGG
Ga0307406_1005670533300031901RhizosphereVTCNNITIHDGVLSPLLLELESLGISIKHVVDDLNDDKELDNLADNLKQKFVKEVRKMEEQGLFVNPGGG
Ga0307407_1026952113300031903RhizosphereVTLPLASNVTRNSITIHDGVLSLLLLELESLGISIKHVVDDLNDDKELDNLADNLKQKFVKEVRKMEEQGLFVNPGGG
Ga0307409_10018486523300031995RhizosphereMISNNITIQSGVLPSLLQELETLGISIHHLDYLNDSGELENLADNLKQQFMEGIREMEEQGLFINPGGG
Ga0307409_10057771923300031995RhizosphereMTIYGVLSPLVQELESLGISIKHIVDDLNDVNELDNLADNLKQKFVKEIREMQEQGLFVNPGGG
Ga0307414_1033052513300032004RhizosphereTPGVLLSQNVTLPLASNVTRNSITIHDGVLSLLLLELESLGISIKHVVDDLNDDKELDNLADNLKQKFVKEVRKMEEQGLFVNPGGG
Ga0307414_1118972513300032004RhizosphereADTILLVITKGCYMISNNITIQSGVIPSLLQELETLGISIHHLDYLNDSGELENLADNLKQQFMEGIREMEEQGLFINPGGG
Ga0307415_10022701223300032126RhizosphereHVITKRCYMISNNITIQSGVLPSLLQELETLGISIHHLDYLNDSGELENLADNLKQQFMEGIREMEEQGLFINPGGG
Ga0334960_062343_205_4143300034402Sub-Biocrust SoilMISNNIAMHRGILPSLVQELESLGISVNHIDHLNDNRELYHLADNLKQEFMNEIREMEEQGLFVNPGGG


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