Metagenome / Metatranscriptome Family F105822

Basic Information
Family ID	F105822
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	48 residues
Representative Sequence	MAAQEYQAPESVGRLQQRALVIGGVALLVSILGAVRTPGLFYQSYL
Number of Associated Samples	87
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (47.000 % of family members)
Environment Ontology (ENVO)	Unclassified (42.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.000 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 1JGIcombinedJ26739_1012387732 2JGI25387J43893_10500422 3JGI25389J43894_10263963 4Ga0066690_101572921 5Ga0066686_100809284 6Ga0066692_106547291 7Ga0066699_107406472 8Ga0066693_104066421 9Ga0066694_102519321 10Ga0066651_103380791 11Ga0075017_1014295752 12Ga0075019_100436171 13Ga0075018_102150851 14Ga0070716_1017512382 15Ga0070765_1014095422 16Ga0066665_106096501 17Ga0099794_102821113 18Ga0099795_100662441 19Ga0099829_110913241 20Ga0099829_116967801 21Ga0099830_107017823 22Ga0099828_114978802 23Ga0099828_119229911 24Ga0099792_101667891 25Ga0099792_106660161 26Ga0126373_132491932 27Ga0127482_10343591 28Ga0099796_101470403 29Ga0134082_101354561 30Ga0126376_124266971 31Ga0126379_109252571 32Ga0150983_100196581 33Ga0150983_128900391 34Ga0137392_105756331 35Ga0137391_104924191 36Ga0137393_112294782 37Ga0137389_109732981 38Ga0137388_113669321 39Ga0137363_102481851 40Ga0137363_111024521 41Ga0137399_100552321 42Ga0137362_117550071 43Ga0137376_111228421 44Ga0137379_109425791 45Ga0137377_118683241 46Ga0137386_103131841 47Ga0137386_106773552 48Ga0137384_114950801 49Ga0137360_107258122 50Ga0137361_106873691 51Ga0137390_108037793 52Ga0137397_102736221 53Ga0137397_113619291 54Ga0137413_104602453 55Ga0153915_100047941 56Ga0164304_108782201 57Ga0134078_100486141 58Ga0137414_10203681 59Ga0137405_13509583 60Ga0137420_13938401 61Ga0137420_14550155 62Ga0167668_10623361 63Ga0137418_101197754 64Ga0187766_107321281 65Ga0066669_106686221 66Ga0210407_111667941 67Ga0210407_114056442 68Ga0210399_114501291 69Ga0210406_113377261 70Ga0210400_100564835 71Ga0210394_112561342 72Ga0210402_104306751 73Ga0210409_101121291 74Ga0207700_102150291 75Ga0209236_11169073 76Ga0209687_10473214 77Ga0209802_11609113 78Ga0257157_10386831 79Ga0209157_11495283 80Ga0209179_11400741 81Ga0209076_10160461 82Ga0209076_12252821 83Ga0209588_11894332 84Ga0208989_101412842 85Ga0209180_103432272 86Ga0209701_100167531 87Ga0209701_102357821 88Ga0209283_100449371 89Ga0209283_105739611 90Ga0209283_109229772 91Ga0209068_109466862 92Ga0209488_106615302 93Ga0209415_103926391 94Ga0222749_106963861 95Ga0075385_114834372 96Ga0307469_121352551 97Ga0307477_105972962 98Ga0307475_104220733 99Ga0307473_103485583 100Ga0335077_106798863
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 1JGIcombinedJ26739_1012387732 2JGI25387J43893_10500422 3Ga0066690_101572921 4Ga0066692_106547291 5Ga0066651_103380791 6Ga0075017_1014295752 7Ga0075019_100436171 8Ga0075018_102150851 9Ga0070716_1017512382 10Ga0070765_1014095422 11Ga0099830_107017823 12Ga0126373_132491932 13Ga0099796_101470403 14Ga0126376_124266971 15Ga0137379_109425791 16Ga0153915_100047941 17Ga0134078_100486141 18Ga0137414_10203681 19Ga0137420_14550155 20Ga0187766_107321281 21Ga0210399_114501291 22Ga0210400_100564835 23Ga0210402_104306751 24Ga0209236_11169073 25Ga0335077_106798863
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46 1Ga0257157_10386831 2Ga0066690_101572921 3Ga0066692_106547291 4Ga0066699_107406472 5Ga0066693_104066421 6Ga0075019_100436171 7Ga0075018_102150851 8Ga0070716_1017512382 9Ga0070765_1014095422 10Ga0099829_110913241 11Ga0099830_107017823 12Ga0099828_114978802 13Ga0099792_101667891 14Ga0099792_106660161 15Ga0126373_132491932 16Ga0127482_10343591 17Ga0126376_124266971 18Ga0150983_100196581 19Ga0150983_128900391 20Ga0137392_105756331 21Ga0137389_109732981 22Ga0137388_113669321 23Ga0137399_100552321 24Ga0137379_109425791 25Ga0137377_118683241 26Ga0137360_107258122 27Ga0137361_106873691 28Ga0137390_108037793 29Ga0137397_113619291 30Ga0153915_100047941 31Ga0164304_108782201 32Ga0134078_100486141 33Ga0137420_13938401 34Ga0167668_10623361 35Ga0137418_101197754 36Ga0187766_107321281 37Ga0210399_114501291 38Ga0210406_113377261 39Ga0210400_100564835 40Ga0210402_104306751 41Ga0210409_101121291 42Ga0207700_102150291 43Ga0209802_11609113 44Ga0209157_11495283 45Ga0209179_11400741 46Ga0209076_10160461 47Ga0209701_100167531 48Ga0209068_109466862 49Ga0222749_106963861 50Ga0075385_114834372 51Ga0307477_105972962 52Ga0307475_104220733 53Ga0307473_103485583 54Ga0335077_106798863
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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF13442	Cytochrome_CBB3	73.00
PF11821	ActD	19.00
PF03916	NrfD	5.00
PF13247	Fer4_11	1.00

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
No data available in table

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	5.00%
Terrestrial	Environmental → Terrestrial	95.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	1.00%
Sediment	Environmental → Aquatic → Sediment	4.00%
Soil	Environmental → Terrestrial → Soil	95.00%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	7.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.00%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	56.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.00%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.00%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.00%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.00%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.00%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.00%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.00%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	47.00%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.00%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M

Showing 1 to 10 of 87 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1012387732	3300002245	Forest Soil	MAAQEYRAPESIGRLQQRAFVVGAIALVLSLVGAMKSPALFYQ
JGI25387J43893_10500422	3300002915	Grasslands Soil	MAAQEYXAPESVSRLQQRAYFVGGIALLVSIFGAVRAPELFFPS
JGI25389J43894_10263963	3300002916	Grasslands Soil	MAAQEYQAPESVSRLQQRAYFVGGVALLVSIFGAVXAPELFFPS
Ga0066690_101572921	3300005177	Soil	MVAQEYQAPESVGRLQQRALFVGGVALLVSILGAVYTHTPELFYQS
Ga0066686_100809284	3300005446	Soil	MAAQEYRAPESVGRLQQRALTVGGVALLVSILGAVRTPGL
Ga0066692_106547291	3300005555	Soil	MAAQEYQAPESIGRLQQWALSIGGVALLVSILGAIRSPADFYQSYLMSFLL
Ga0066699_107406472	3300005561	Soil	MAVQEYQAPESVSRLQQRALLVGGVALVVSILGAVRSPGDFYQSYLMSFL
Ga0066693_104066421	3300005566	Soil	VAAQEYQAPESVSRVQQRALTTGGVALLVSILGAVRSPGDFYQSYLMSFL
Ga0066694_102519321	3300005574	Soil	MAAQEYQAPESVSRVQQRALTIGGVALLVSILGAVRSPRDFYQSYLMSFL
Ga0066651_103380791	3300006031	Soil	MAAQEFQAPESVGRLQTRALFIGGVALLVSILGAVRKPG
Ga0075017_1014295752	3300006059	Watersheds	MAAQEYQAPESVSRLQQRAYLVGGIALLVSIFGAVRTPELFFPSYLMSFLLILGLT
Ga0075019_100436171	3300006086	Watersheds	MSAPEYTAPESVGRLQERAFLVGGVALLVSIFGAMRTPEVFY
Ga0075018_102150851	3300006172	Watersheds	MSAQDYRAPESVGRLQQRAFLVGGVALLLAIFGWMRY
Ga0070716_1017512382	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQEYRAPDSIDRLEKRALVVGAIALVLSLVGAMKSPALFYQSYLMSFMLILGLTLGSL
Ga0070765_1014095422	3300006176	Soil	MAAQEYRAPESIGRLQQRALFVGGVALLVSLLGVMRTPGLFYQSYLMS
Ga0066665_106096501	3300006796	Soil	MAAQEYRAPESVGRLQQRALTVGGVALLVSILGAVRTPGLFYQ
Ga0099794_102821113	3300007265	Vadose Zone Soil	MAAQEYQAPESVGRLQQRALIIGGVALLVSIFGAVRSP
Ga0099795_100662441	3300007788	Vadose Zone Soil	MAAQEYQAPESVSRIQQRAFLVGGIALLVSLLGATRTPDRFYQSYLMSFLLILG
Ga0099829_110913241	3300009038	Vadose Zone Soil	MAAQEYQAPESVGRLQQRALTVGGIALLIAVVGAVRTPSQFYRSYLMSFLLIL
Ga0099829_116967801	3300009038	Vadose Zone Soil	MPAQEYQAPESVGRLQQRALTVGGVALLVSILGAVRTPGLF
Ga0099830_107017823	3300009088	Vadose Zone Soil	MSAQEYNAPASVDRLQRGALAVGGIALLGALVGAFTSPEQFYRSYLFSFLLVLAMTLGSL
Ga0099828_114978802	3300009089	Vadose Zone Soil	MAAQEYQAPESVGRLQQRALSIGGIALLISILGAVYMHTPELFYQSYLMSFLLILGLTVG
Ga0099828_119229911	3300009089	Vadose Zone Soil	MAALEYQAPESVGRLQQRALTVGGIALLVSILGAVRTPGLFYQSYLMSFMLILGLTLG
Ga0099792_101667891	3300009143	Vadose Zone Soil	MAAQEFQAPESVGRLQQRALLIGGVALLVSILGAVRKPGDFYPSYLMSFLLI
Ga0099792_106660161	3300009143	Vadose Zone Soil	MAAQEYQAPESVSRLQQRALFVGAVALLLSLPGAVRTPDLFYQSYLMSFLLI
Ga0126373_132491932	3300010048	Tropical Forest Soil	MTAQEYQAPEGVSRLQTRALGVGGIALVLAIIGAMRSPAAFYQSYLMSFLLVLGLTLGSL
Ga0127482_10343591	3300010126	Grasslands Soil	MAAQEYHAPEGINRLQQRALSIGGVALLVSIVGAVRSPGDFYQSYLMSFLLFLG
Ga0099796_101470403	3300010159	Vadose Zone Soil	MAAQEYQAPESVSRLQQWAFSIGGVALLISILGAVRSPGDFY
Ga0134082_101354561	3300010303	Grasslands Soil	MAAQEYQAPESVSRLQQRAYFVGGVALLVSIFGAVRAPELFFPSYLM
Ga0126376_124266971	3300010359	Tropical Forest Soil	MPAQDYHAPESVGRLQQRALTVGAIALVVSILGAVRSPELFYPAYLMSFLL
Ga0126379_109252571	3300010366	Tropical Forest Soil	MTAQEYQAPEGVSRLQTRALGVGGIALVLAIIGAMRSPAAFYQSYLMSFLLVLGLTL
Ga0150983_100196581	3300011120	Forest Soil	MAAQEFQAPESVGRLQTRALFIGGVALLVSILGGVLKP
Ga0150983_128900391	3300011120	Forest Soil	MSAPEYQAPESVSRLQRRAYFVGGVALLLSITGAVRTPELFYPSYLMSFMLIL
Ga0137392_105756331	3300011269	Vadose Zone Soil	MAAQEYQAPESVSRLQQRALIVGAVALLVSILGARSTPELFYP
Ga0137391_104924191	3300011270	Vadose Zone Soil	MAAQEYQAPESVGRLQQWALSIGGVALLVSILGAVRSPADFYQSYLMSFLLILG
Ga0137393_112294782	3300011271	Vadose Zone Soil	MAAQEYRAPESVGRLQQRALTVGGVALLVSILGAVRTPGLFYQSYLMSFML
Ga0137389_109732981	3300012096	Vadose Zone Soil	MTGQEYQAPESVGRLQTGALTVGGIAMVLAIFGAMRSPSAFYESYLVSFLLVLGLSL
Ga0137388_113669321	3300012189	Vadose Zone Soil	MAAQEYQAPESIGRLQQRALLIGGLALLLSILGAVRSPELFY
Ga0137363_102481851	3300012202	Vadose Zone Soil	MAAQEYRAPESIGLLQQRALLVGGIALVLSIVGAVKFPGAFYQSYLMS
Ga0137363_111024521	3300012202	Vadose Zone Soil	MAAQEYHAPESISRLQQWALLIGGVALLVSILGAVRSPGDFYQSYLMTFLLF
Ga0137399_100552321	3300012203	Vadose Zone Soil	MAAQEYQAPESVSRLQQRALFVGGLALVVSILGAMRTPELFYPSYLMSFLLILG
Ga0137362_117550071	3300012205	Vadose Zone Soil	MAAQEYQAPESVGRLQQRALIIGGVALLVSIFGAVRSPGDFYQSYLVSFLLILGLTV
Ga0137376_111228421	3300012208	Vadose Zone Soil	MAAQEFQAPESVGRLQQRALLIGGVALLVSILGAVRKPGDFYPSYLMS
Ga0137379_109425791	3300012209	Vadose Zone Soil	MSAPDYKAPESVGRLQQWALMIGGFALLVSILGAVRTPGLFYQSYLMSFLLILGLTVGSLGL
Ga0137377_118683241	3300012211	Vadose Zone Soil	MAAQEYQAPESVSRLQQRAYFVGGFALLVSIFGAVRAPELFFPSYLMSFLLILGLTVGSL
Ga0137386_103131841	3300012351	Vadose Zone Soil	MAAQEYQAPESINGLQQWALSIGGVALLVSILGAVRSPGDFYQ
Ga0137386_106773552	3300012351	Vadose Zone Soil	MAAEEYRAPESVGRLQQRALTVGGVALLVSILGAVRTPGLFYQSYLMSFMLILGLTL
Ga0137384_114950801	3300012357	Vadose Zone Soil	MAAQEYRAPESLGRLQQWALFIGGAALLVSILGAVRT
Ga0137360_107258122	3300012361	Vadose Zone Soil	MAAQEYRAPESVGRLQHWALFIGGGALLVSILGAVRTPELFYPSYLMSFLLILGLTVGSLGLVMLQ
Ga0137361_106873691	3300012362	Vadose Zone Soil	MAAQEYHAPESISRLQQWALLIGGVALLVSILGAVRNPGDF
Ga0137390_108037793	3300012363	Vadose Zone Soil	MAAQEYRAPESVSRLQHRALLVGGAALLVSILGAVRTPELFYPSYLM
Ga0137397_102736221	3300012685	Vadose Zone Soil	MAAQEYQAPESVGRLQQWALSIGGVALLISILGAVRSPGDFYQSYLMS
Ga0137397_113619291	3300012685	Vadose Zone Soil	MAAQEYHAPESVGRLQQWALSIGGVALLISILGAVRSPGDFYQSYLMS
Ga0137413_104602453	3300012924	Vadose Zone Soil	MAAQEYQAPESVGHLQQWALSIGGVALLVSILGAVRSPADFYQSYLMSFLLILGL
Ga0153915_100047941	3300012931	Freshwater Wetlands	MAAQEYQAPESVGRLQQRALIVGGVALVLAIFLGVRTPELFYRSYLMSFMLVLGLTVGSLGLVML
Ga0164304_108782201	3300012986	Soil	MAAQEYRAPDSIGRLQQRALVVGAIAFVLSLAGAIKSPALFYQSYLMSFM
Ga0134078_100486141	3300014157	Grasslands Soil	MTAQDYKAPESVGRLQQSALAIGGIALILALFGAVRSPELFYPSYLMSFMLILGLAW
Ga0137414_10203681	3300015051	Vadose Zone Soil	MAAQEFQAPESVGRLQQRALLIGGVALLVSILGAVRKPGDFYPSYLMSFLLILGLDRGLAGPRDAA
Ga0137405_13509583	3300015053	Vadose Zone Soil	MSAPEYTAPESVSRLQQRAFLVGGVALLVSILGALRTPELF*
Ga0137420_13938401	3300015054	Vadose Zone Soil	MAAQEYQAPESVGRLQQWALSIGGVALLVSILGAVRSQPRGFLSVLLDEF
Ga0137420_14550155	3300015054	Vadose Zone Soil	MAAQEYHAPESVGRLQQWALSIGGVALLISILGAVRSQGISINPT*
Ga0167668_10623361	3300015193	Glacier Forefield Soil	MAAQEYQAPESIGRLQQRALVVGGIALVIALFGAVRSPGLFYQSYL
Ga0137418_101197754	3300015241	Vadose Zone Soil	MAAQEYQAPESISLLQQRALLVGGIALVLSIVGAVKFPGAFYQSYLMSFMLVLGLTLGSLAL
Ga0187766_107321281	3300018058	Tropical Peatland	MAAQEYQAPESVGRLQKRAFIVGLIALMLALSGAVRAPELFYRSYLM
Ga0066669_106686221	3300018482	Grasslands Soil	MAAQEYQAPESVSRLQQRAYFVGGFALLVSIFGAVRAPELFFPSYLMSFLLILGLTV
Ga0210407_111667941	3300020579	Soil	MAAQEYQAPESVGRLQQRALVIGGVALLVSILGAVRTPGLFYQS
Ga0210407_114056442	3300020579	Soil	MAAQEYRAPESIGRLQQRALFVGGVALLVSMLGVMRTPGLFYQSYLMSFMLICGLTL
Ga0210399_114501291	3300020581	Soil	MSAPDYNAPESVSRLQQRAFLVGGIALLVSILGAVNTPALFYPSYL
Ga0210406_113377261	3300021168	Soil	MTAPDYRAPESVGRLQQRAFLVGGVAVLLAIFGWVRYPDD
Ga0210400_100564835	3300021170	Soil	MAPEQYQAPESVSRLQQRAFIVGGVALVVSIFGAMRTPEIFYP
Ga0210394_112561342	3300021420	Soil	MAAQEYRAPESIGRLQQRALFVGGVALLVSMLGVMRTPG
Ga0210402_104306751	3300021478	Soil	MPAQEYQAPESVSRLQHRASLVGGIALLVSILGAVRTPE
Ga0210409_101121291	3300021559	Soil	MAAQEYQAPESVGRLQQRALLIGGVALLLSIMGAVRSPGN
Ga0207700_102150291	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPAQEYQVPESVSRLQNRAYRVGGIALLVSVFGAVRAPELFFPS
Ga0209236_11169073	3300026298	Grasslands Soil	MAAQEYRAPESIGRLQQRALLVGGIALVLSVVGAVK
Ga0209687_10473214	3300026322	Soil	MAVQEYQAPESVSRLQQRALSVGGVALVVSILGAVRSPGDF
Ga0209802_11609113	3300026328	Soil	MAAPEYQAPESVGRLQQRAYIVGVFALVIAIFGAVWTRTPGIFYQSYLMSFLLILGLTVGSLGLVMLQ
Ga0257157_10386831	3300026496	Soil	MAAQEYQAPESVGRLQQRALVIGGVALLVSILGAVRTPGLFYQSYL
Ga0209157_11495283	3300026537	Soil	MSAPEYNAPESVGRLQTRAFLVGGLALLVSIPGALRSPEL
Ga0209179_11400741	3300027512	Vadose Zone Soil	MAAQEYQAPESVSRIQQRAFLVGGIALLVSLLGATRTPDRFYQSYLMSFLL
Ga0209076_10160461	3300027643	Vadose Zone Soil	MAAQEYQVPESVGRLQQRALLVGGIALVVSILGAMRTPELFYQSYLMSFLLILGLTV
Ga0209076_12252821	3300027643	Vadose Zone Soil	MAAQEYQAPESVGRLQQRALVIGGVALLVSILGAVRTPGLFYQSYLMSFLLIL
Ga0209588_11894332	3300027671	Vadose Zone Soil	MAAQEYRAPESIGRLQQRALLVGGISLVLSIVGAVK
Ga0208989_101412842	3300027738	Forest Soil	MAAQEFQAPESVGRLQTRALFVGGIALLVSILGAV
Ga0209180_103432272	3300027846	Vadose Zone Soil	MAAQEYRAPESVSRLQHRALLVGGVALLVSILGAVRTPELFYPSYLMSFLL
Ga0209701_100167531	3300027862	Vadose Zone Soil	MAAQEYRAPESIGRLQERALLVGGIALVLSIVGAVKFPGPFYQSYLMSFMFVLGLTLG
Ga0209701_102357821	3300027862	Vadose Zone Soil	MAAQEYQAPESVGRLQQRALSIGGIALLISILGAVYMHTPELFYQSYL
Ga0209283_100449371	3300027875	Vadose Zone Soil	MAAQEYQAPESVGRLQQRALFIGGVALLVSILGAVRTPGLF
Ga0209283_105739611	3300027875	Vadose Zone Soil	MAAQEYQAPESVSRLQQRALFIGGVALLVSILGARRTPELFYQSY
Ga0209283_109229772	3300027875	Vadose Zone Soil	MAAQEYQAPESIGRLQQRALLIGGLALLLSILGAVRSPELF
Ga0209068_109466862	3300027894	Watersheds	MAAQQYPAPESVSRLQQRAFIVGGIALLVSILGAMRTPELFYPSYLMSFM
Ga0209488_106615302	3300027903	Vadose Zone Soil	MAAQEYRAPESIGRLQQRALLVGGIALVLSIFGALKFPGPFYQSY
Ga0209415_103926391	3300027905	Peatlands Soil	MSAPEYNAPESVSRLQQWAFIVGGIALLVSILGAVNTPALFYQSYLMSFMLVLGLT
Ga0222749_106963861	3300029636	Soil	MAAQEYPAPESVGRLQQRALVVGGIALLLSIFGAMRSPGPFYQ
Ga0075385_114834372	3300030854	Soil	MSAPEYTAPESVSRLQQRAFLVGGIALLVSILGALRTPELFYPSYLMSFMLV
Ga0307469_121352551	3300031720	Hardwood Forest Soil	MAAQEYRAPESIGRLQQRAFVVGAIALVLSLVGAMKSPALFYQSY
Ga0307477_105972962	3300031753	Hardwood Forest Soil	MAAEQYQAPESVSRLQQRAFIVGGVALLISIFGAMRSP
Ga0307475_104220733	3300031754	Hardwood Forest Soil	MAAQEYQAPESVSRLQQRALIVGGVALLLSIMGAVRSPGDFYQSYLVSFLLVL
Ga0307473_103485583	3300031820	Hardwood Forest Soil	MAAQDYRAPESIGRLQQRALVVGGIALVLSLVGAMKSPALFYQSYLMS
Ga0335077_106798863	3300033158	Soil	MNAQEYRAPEGVNRVQSIGFVVGGVALLLAIVGAVTS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F105822

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences