NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F105819

Metagenome Family F105819

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105819
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 135 residues
Representative Sequence MGQTQYRATEVAKTLGRYIKADLAEGLSLALINRKFPGMTRDELSRVLAICKDEATLEYERAQEMLVSMRETTAGYAALFALVDLWRSQSEEVRSAICDASIDLAEALNTLQAQLAAAPAQKGAELLANLLPTPA
Number of Associated Samples 54
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 1.00 %
Associated GOLD sequencing projects 47
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (98.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds
(50.000 % of family members)
Environment Ontology (ENVO) Unclassified
(65.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(50.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.192.
14NP_02737910
2Ga0075296_10041762
3Ga0075023_1001318811
4Ga0075023_1005599241
5Ga0075024_1000479441
6Ga0075024_1004168822
7Ga0075028_1000877613
8Ga0075028_1002803182
9Ga0075028_1002924222
10Ga0075029_1000158914
11Ga0075029_1000327873
12Ga0075029_1000580413
13Ga0075029_1001042483
14Ga0075029_1002358652
15Ga0075026_1000259723
16Ga0075026_1003335841
17Ga0075026_1010348501
18Ga0075017_1000808033
19Ga0075017_1005532582
20Ga0075017_1015855621
21Ga0075019_100123015
22Ga0075019_101048023
23Ga0075019_104222641
24Ga0075015_1000182906
25Ga0075015_1000254174
26Ga0075015_1001377442
27Ga0075015_1006810902
28Ga0075015_1009665121
29Ga0075030_1001185331
30Ga0075030_1004225781
31Ga0075030_1007021051
32Ga0075018_102450591
33Ga0075018_105440432
34Ga0075014_1000246113
35Ga0075014_1004046271
36Ga0075021_100960753
37Ga0075021_105489771
38Ga0075021_108898902
39Ga0075524_104039941
40Ga0136449_1029524421
41Ga0164305_122330951
42Ga0132258_101669463
43Ga0132258_126883622
44Ga0132255_1062201061
45Ga0187812_10159304
46Ga0187812_11061192
47Ga0187802_100819832
48Ga0187818_1000281711
49Ga0187806_10971582
50Ga0187814_102930291
51Ga0187801_101420671
52Ga0187803_101540591
53Ga0187809_100045888
54Ga0187775_101576022
55Ga0187819_102221282
56Ga0187819_106691651
57Ga0187817_100077803
58Ga0187817_103870841
59Ga0187779_110027111
60Ga0187778_111691012
61Ga0187776_102760672
62Ga0187776_104063512
63Ga0187777_101103792
64Ga0187777_102434252
65Ga0187777_104379743
66Ga0187777_109902671
67Ga0187777_110224151
68Ga0187816_101773321
69Ga0187816_102717741
70Ga0187767_100511922
71Ga0187766_101329793
72Ga0187766_107225901
73Ga0187765_109005502
74Ga0187765_113220781
75Ga0187773_103482401
76Ga0190272_114530291
77Ga0190275_100629032
78Ga0190275_107113842
79Ga0190270_132791541
80Ga0209585_103429621
81Ga0207684_107137951
82Ga0209068_104914921
83Ga0209067_100688093
84Ga0209067_101061102
85Ga0209067_101292992
86Ga0209067_105878601
87Ga0209067_106401931
88Ga0209583_100266524
89Ga0209583_100935051
90Ga0209583_104717421
91Ga0209698_100693822
92Ga0209698_101437992
93Ga0209698_107771721
94Ga0209069_100707811
95Ga0209069_101880452
96Ga0310884_105219492
97Ga0335070_103759751
98Ga0335081_116448461
99Ga0335077_117992221
100Ga0370495_0097427_357_755
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 69.33%    β-sheet: 0.00%    Coil/Unstructured: 30.67%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

20406080100120MGQTQYRATEVAKTLGRYIKADLAEGLSLALINRKFPGMTRDELSRVLAICKDEATLEYERAQEMLVSMRETTAGYAALFALVDLWRSQSEEVRSAICDASIDLAEALNTLQAQLAAAPAQKGAELLANLLPTPASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
98.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Watersheds
Soil
Peatlands Soil
Arctic Peat Soil
Soil
Soil
Untreated Peat Soil
Rice Paddy Soil
Tropical Peatland
Corn, Switchgrass And Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Switchgrass, Maize And Mischanthus Litter
15.0%50.0%5.0%3.0%16.0%3.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
4NP_027379102170459021Switchgrass, Maize And Mischanthus LitterMGQTQYRSTEVAKTLSRFIKADLPDDLALALINNKFPGMSREEILRVFGICQDEAALEYECSQEVLASMRETTTGYAPLFALVDLWRSQSEAQRRAVSDASFELAETLNRLQGQLETTSTQKGSQLLANLYSQ
Ga0075296_100417623300005877Rice Paddy SoilMGQAHYPSMEVAKTLSRFIKADLAEGLALALIHRKFPGMSRDELLRVLDLCRDEVTLEYERSQELSASMQETAAGYAALFALVDLWCAQSDEQRRAISDASFELAETLDRLDAQLAAASTQDGSELLANLYKRTTALMRS*
Ga0075023_10013188113300006041WatershedsQTQYRATEVAQTLGRYIKADLAEGLSLDLINRSFPGITREELSRVLAICKDEAMLEYERTQEMLASMRETTMGYAALFALIDLWRSQSEEVRSAIGEASAEFAEVLNRLQAQLSAAPAQKGSELLANLLPMPA*
Ga0075023_10055992413300006041WatershedsMGQTQYRSTEVAKTLSLFIKADLADDLALALINSKFPGMSGEELLRVFGICQDEAALEYERSQEVLASVRETTTGYAALFALVDLWRSQSEEQRRAISDASFELAETLNRLQAQL
Ga0075024_10004794413300006047WatershedsMGQTQYRATEVAKTLGRYIKADLTEGLSLALINRKFPGMTREELSRVLAICKDEATLDYERAQEMLVSMRETTAGYAVLFALIDLWRSQSEEVRSAIGEASAEFAEVLNRLQEQLAAASAQKGSELLANLLPTSA*
Ga0075024_10041688223300006047WatershedsMGQTQYRATEVAQTLGRYIKADLAEGLSLDLINRSFPGITREELSRVLAICKDEATLEYERTQEMLASMRETTMGYAALFALIDLWRSQSEEVRSAIGEASAEFAEVLNRLQAQLSAAPAQKGSELLANLLPMPA*
Ga0075028_10008776133300006050WatershedsMGQTQHRATEVAQTLGRYIKADLAEGLSLDLINRSFPGITREELSRVLAICKDEATLEYERTQEMLASMRETTMGYAALFALIDLWRSQSEEVRSAIGEASAEFAEVLNRLQAQLSAAPAQKGSELLANLLPMPA*
Ga0075028_10028031823300006050WatershedsMGQTQYRATEVAKTLGRYIKADLAEGLSLALINGKFPGMTRDELSRVLAICKDEATLEYERAQEMLMSMRETTVGYAALFALIDLWRSQSEEVRSAIGQASAEFAEVLNRLQAQLAAAPAQRGSELLA
Ga0075028_10029242223300006050WatershedsTQYRSTEVAKTLSLFIKADLADDLALALINSKFPGMSGEELLRVFGICQDEAALEYERSQEVLASVRETTTGYAALFALVDLWRSQSEEQRRAISDASFELAETLNRLQAQLATTSTQKGAQLLANLYSQRPINAAVMIPKSD*
Ga0075029_10001589143300006052WatershedsMGQTQYRATEVAKTLSRFIKADLAEDLSLAMINRKFPGMSREELLRVLDICKDEATLEYERSQELLASMRETTTGYAALFALVDLWRSHSEEQRRSIGLASSELATTLDKLQAEFAVSSRHKGWELLANFTSQRPH*
Ga0075029_10003278733300006052WatershedsMGQTQYRSSEVAKTLSLFIKADLADDLALALINSKFPGMSGEELLRVFGICQDEAALEYERSQEVLASVRETTTGYAALFALVDLWRSQSEEQRRAISDASFELAETLNRLQAQLATTSTQKGAQLLANLYSQRPINAAVMIPKSD*
Ga0075029_10005804133300006052WatershedsMGQTQYRATEVAKTLGRYIKADLAEGLSLALINGKFPGMTRDELSRVLAICKDEATLDYERAQEMLMSMRETTAGYAALFSLIDLWRSQSEEVRSAIGQASTEFAELLNRLQAQLAAAPAQKDWQLLANLLPTPS*
Ga0075029_10010424833300006052WatershedsMGQTQYRATEVAKTLGRYIKADLAEGLSLALINRKFPGMTRDELSRVLAICKDEATLEYERAQEMLVSMRETTAGYAALFALVDLWRSQSEEVRSAICDASIDLAEALNTLQAQLAAAPAQKGAELLANLLPTPA*
Ga0075029_10023586523300006052WatershedsMGQQYRATEVAKTLSRFIKADLAEGLSLALIHRKFPGMSRDELLRVFDICKDEATLEYERAHEVLASMRETTAGYAALFALVDLWRSQSEEQRRLISEASFELAETLDRLQAQLTDLPSQKGAELLTNFQRRKHTLV*
Ga0075026_10002597233300006057WatershedsMRQTQYRATEVAQTLGRYIKADLAEGLSLDLINRSFPGITREELSRVLAICKDEATLEYERTQEMLASMRETTMGYAALFALIDLWRSQSEEVRSAIGEASAEFAEVLNRLQAQLSAAPAQKGSELLANLLPMPA*
Ga0075026_10033358413300006057WatershedsMGQTQYRATEVAKTLGRYIKADLTEGLSLALINRKFPGMTREELSRVLAICKDEATLDYERAQEMLVSMRETTAGYAVLFALIDLWRSQSEEVRSAIGEASAEFAEVLNRLQAQLAAAPAQKGSERLANLRPTPA*
Ga0075026_10103485013300006057WatershedsMGQTQYRATEVAKTLGRYIKADLAAGLSLALIKGKFPGMSRDELSRVLAICKDEATLEYERAQEMLMSMRETTAGYAALFALIDLWRSQSEEVRSAIGEASAEFAEVLN
Ga0075017_10008080333300006059WatershedsMRQSQHRATEVAKTLSRFIKADLAEDLSLAMIKRKFPGMSEEELLRVLAICQDEATLEYERSQELVASMRETTAGYAALLALVDLWRSHSEEHRRMIGHISSELANTLDKLRAQWAASSRHMGWELLADLTSQGQLQCGRDAPRV*
Ga0075017_10055325823300006059WatershedsIKADLAEGLSLALINGKFPGMTRDELSRVLAICKDEATLDYERAQEMLMSMRETTAGYAALFSLIDLWRSQSEEVRSAIGQASTEFAELLNRLQAQLAAAPAQKDWQLLANLLPTPS*
Ga0075017_10158556213300006059WatershedsVQPSASMEEPTMGQTQYRATEVAETLGRYIKADLAEGLSLALINRKFPGMTRDELSRVLAICKDEATLEYERAQEMLVSMRETTAGYAALFALVDLWRSQSEEVRSAICDASIDLAEALNTLQAQLAAAPAQKGAELLANLLPTPA*
Ga0075019_1001230153300006086WatershedsMGQTQYRATEVAKTLSRFIKADLADGLALILINRKFPGISREELLRVLDICKDEATLEYERSQELLASMRETTTGYAALFALVDLWRSHSEEQRRSIGLASSELATTLDKLQAEFAVSSRHKGWELLANFTSQRPH*
Ga0075019_1010480233300006086WatershedsMGQTQYRATEVAETLGRYIKADLAEGLSLALINRKFPGMTRDELSRVLAICKDEATLEYERAQEMLVSMRETTAGYAALFALVDLWRSQSEEVRSAICDASIDLAEALNTLQAQLAAAPAQKGAELLANLLPTPA*
Ga0075019_1042226413300006086WatershedsMSEPLVFLVVVGSAFEVHPQHATEESAMGQTQYRSTEVAKTLSLFIKADLADDLALALINSKFPGMSGEELLRVFGICQDEAALEYERSQEVLASVRETTTGYAALFALVDLWRSQSEEQRRAISDASFELAETLNRLQAQLATTSTQKGAQLLANLYSQRPINAAVMIPKSD*
Ga0075015_10001829063300006102WatershedsMGPTQHRATEVAKTLSRFIKADLAEDLSLAMINRKFPGMSREELLRVLDICKDEATLEYERSQELLASMRETTTGYAALFALVDLWRSHSEEQRRSIGLASSELATTLDKLQAEFAVSSRHKGWELLANFTSQRPH*
Ga0075015_10002541743300006102WatershedsMGQTQYRATEVAKTLGRYIKADLAEGLTLALINGKFPGMSRDELSRVLAICKDDATLEYERAQEMLMSMRETTVGYAALFALIDLWRSQSEEVRSAIGQASAEFAEVLNRLQAQLAAAPAQRGSELLANL
Ga0075015_10013774423300006102WatershedsMRQSQHRATEVAKTLSRFIRADLADDLSLAMINREFPGMSGEELLRVLAICQDEATLEYERSQELVASMRETTAGYAALLALVDLWRSHSEEHRRMIGHISSELANTLDKLRAQWAASSRHMGWELLADLTSQGQLQCGRDAPRV*
Ga0075015_10068109023300006102WatershedsMGQQYRATEVAKTLSRFIKADLAEGLSLALIHRKFPGMSRDELLRVFDICKDEATLEYERAHEVLASMRETAAGYAALFALVDLWRSQSEEQRRLISEASFELAETLDRLQAQLTDLPSQKGAELLTNFQRRKHTLV*
Ga0075015_10096651213300006102WatershedsLKVQPSASMEEPTMGQTQYRATEVAKTLGRYIKADLAEGLSLALINRKFPGMTRDELSRVLAICKDEATLEYERAQEMLVSMRETTAGYAALFALVDLWRSQSEEVRSAICDASIDLAEALNTLQAQLAAAPAQKGAELLANLLPTPA*
Ga0075030_10011853313300006162WatershedsMGQPQHRTNEVAKTLGRFIKADLAEGLSLALIHRKFPGISRDELLRVLDICKDEATLEYERTQEMLASMGEMTAGFAALFALLDLWRSHSKEQRRAISDASGQLAEMLDKLQAQLVAAPRRRGWSYWRVCTPAALVRT
Ga0075030_10042257813300006162WatershedsMGQTQYRSSEVAKTLSLFIKADLADDLALALINSKFPGMSGEELLRVFGICQDEAALEYERSQEVLASVRETTTGYAALFALVDLWRSQSEEQRRAISDASFELAETLNRLQAQLATTSTQKGAQLMANLYSQRPINAAVMIPKSD*
Ga0075030_10070210513300006162WatershedsMRQSQHRATEVAKTLSRFIKADLAEDLSLAMIKRKFPGMSEEELLRVLAICQDEATLEYERSQELVASMRETTAGYAALLALVDLWRSHSEEHRRMIGHISSELANTLDKLQAQWAVSSRHKCWERLTDLTSQRPHQCGRDDP
Ga0075018_1024505913300006172WatershedsTLGRYIKADLAEGLSLDLINRSFPGITREELSRVLAICKDEATLEYERTQEMLASMRETTMGYAALFALIDLWRSQSEEVRSAIGEASAEFAEVLNRLQAQLSAAPAQKGSELLANLLPMPA*
Ga0075018_1054404323300006172WatershedsMGQTQYRATEVAKTLGRYIKADLAEGLSLALINRKFPGMTREELSRVLAICRDEATLDYERAQEMLVSMRETTAGYAALFALVDLWRSQSEEVRSAICDASIDLAEALNTLQAQLAAAPAQKGAELLANLLPTPA*
Ga0075014_10002461133300006174WatershedsMGQTQYRATEVAKTLSRFIKADLADGLALILINRKFPGISREELLRVLAICQDEATLEYERSQELLASMRETTTGYAALFALVDLWRSHSEEQRRSIGLASSELATTLDKLQAEFAVSSRHKGWELLANFTSQRPH*
Ga0075014_10040462713300006174WatershedsGRYIKADLAEGLSLDLINRSFPGITREELSRVLAICKDEATLEYERTQEMLASMRETTMGYAALFALIDLWRSQSEEVRSAIGEASAEFAEVLNRLQAQLSAAPAQKGSELLANLLPMPA
Ga0075021_1009607533300006354WatershedsMGPTQHRATEVAKTLSRFIKADLAEDLSLAMINRKFPGMSREELLRVLDICKDEATLEYERSQELLASMRETTTGYAALFALVDLWRSHSEEQRRSIGLASSELATTLDKLQAEYAVSSRHKGWELLANFTSQRPH*
Ga0075021_1054897713300006354WatershedsMSEPLFFLVVVGSAFEVHPQHATEEPTMGQTQYRSTEVAKTLSLFIKADLADDLALALINSKFPGMSGEELLRVFGICQDEAALEYERSQEVLASVRETTTGYAALFALVDLWRSQSEEQRRAISDASFELAETLNRLQAQLATTSTQKGAQLLANLYSQRPINAAVMIPKSD*
Ga0075021_1088989023300006354WatershedsQYRATEVAKTLGRYIKADLAEGLSLALINRKFPGMTREELSRVLAICKDEATLDYERAQEMLVSMRETTAGYAALFALVDLWRSQSEEVRSAIDQASPEFAEVLNRLQAQLAAAPAQKGSELLANLLPTPA*
Ga0075524_1040399413300006950Arctic Peat SoilRFIKADLAEDLSLAMINRKFPGISHEDLLRVFAICQDEAVLEYERSQELLANMRETTAGYAALFALVDLWRSHSEEQRRLISDASSEFADTLDQLSEHLAASSRDKGWELLANLVS*
Ga0136449_10295244213300010379Peatlands SoilMEEPAMGQTQYRATEVAKKLSRFIKADLAEGLALILINRKFPGISREELLRVLAICQDEATLEYERSQELFASMRETTTGYAVLFALVDLWSSHSEEQRRSIGLASSELATTLDKLQAEFAVSSRHKGWELLANFTSQRPH*
Ga0164305_1223309513300012989SoilMEEPTMGQTQYRATDVAKALGRYIKADLAEGLSLDLINRNFPGMTREELSRVLALCKDEATLEYERAQEMLMSIREMTAGYAALFALIDLWRSQSEEVRSAIGQASPEFADVLNRLQAQLASAPARMGSELLANLLPTPA*
Ga0132258_1016694633300015371Arabidopsis RhizosphereMQEPTMGQTQYRATEVAKTLGRYIKADLAEGVTLALINRKFPGITREELSRVLAICKDEATLEYERAQEMLASMRETTAGYAALFALVDLWRSQSDEVRSAISDASAEFAEALNRLQAQLQSAPVQKGSELLINLLPTPV*
Ga0132258_1268836223300015371Arabidopsis RhizosphereMEEPTMGQTQYRATEVAKTLGRYIKADLAEGLSLALINRRFPGMTREELSRVLAICQDEATLEYERTQEMLASMRETTAGYAALHALVSLWCSQSDEARSAIRDASAEFAEVLYMLEAQLKTAPAQKGSELLANLMPTPA*
Ga0132255_10622010613300015374Arabidopsis RhizosphereMQEPTMGQTQYRATEVAKTLGRYIKADLAEGVSLALINRKFPGITREELSRVLAICKDEATLEYERAQEMLASMRETTAGYAALFAIVDLWRSQSDEVRSAISDASAEFAEALNRLQAQLQSAPVQKGSELLINLLPTPV*
Ga0187812_101593043300017821Freshwater SedimentMGQAHYRATEVAKTLGRFIKADLAEGLALALIHRKFPGMSRDELLRVLDLCRDEVTLEYERSQELLASMQETTAGYAALFALVDLWRSHSDEERRAISDTSFELAETLDRLHAQLAAASTQKGSELLANLYHLPH
Ga0187812_110611923300017821Freshwater SedimentEVAKTLSRFIKADLAEDLSLAMINRKFPGMSREELLRVLAICQDEAVLELERSQEVLASMRETTAGYAALFSLLDLWRSHSEEQRRVISDASSELANTLDKLQAQLAASSRHKSWELLANVTSQGPH
Ga0187802_1008198323300017822Freshwater SedimentVAKTLGRFIKADLAEGLALALIHRKFPGMSRDELLRVLALCRDEVTLEYERSQELLASMQETTAGYAALFALVDLWRSHSDEERRAISDTSFELAETLDRLHAQLAAASTQKGSELLANLYHLPH
Ga0187818_10002817113300017823Freshwater SedimentMGQAHYRATEVAKTLGCFIKADLAEGLALALIHRKFPGMSRDELLRVLDLCRDEVTLEYERSQELLASMQETTAGYAALFALVDLWRSHSDEERRAISDTSFELAETLDRLHAQLAAASTQKGSELLANLYHLPH
Ga0187806_109715823300017928Freshwater SedimentMGHTQHRATEVAKTLGRFIKADLAEGLSLALLHRKFPGMTRDEILHVLDICKDEATLEYERSQEVLASMRETTAGYAALFGLLDLWRSQSEEQRQLIKEASFELTETLERLETQFAEASRYTGAELLANIHQQKHNLMRP
Ga0187814_1029302913300017932Freshwater SedimentRFIKADLAEGLALALIHRKFPGMSRDELLRVLDLCRDEVTLEYERSQELLASMQETTAGYAALFALVDLWRSHSDEERRAISDTSFELAETLDRLHAQLAAASTQKGSELLANLYHLPH
Ga0187801_1014206713300017933Freshwater SedimentMGQAHYRSTEVAKTLSRFIKADLAEGLALALIHRKFPGMSRDELLRVLDICKDEATLEYERSQELLASMLETTAGYAALFALVDLWRSHSEEQRRVISDASFELAETLDRLDAQLAAASTQKGPELLANLYKPTTALMRS
Ga0187803_1015405913300017934Freshwater SedimentKTLGRFIKADLAEGLALALIHRKFPGMSRDELLRVLDLCRDEVTLEYERSQELLASMQETTAGYAALFALVDLWRSHSDEERRAISDTSFELAETLDRLHAQLAAASTQKGSELLANLYHLPH
Ga0187809_1000458883300017937Freshwater SedimentMGQAHYRATEVAKTLGRFIKADLAEGLALALIHRKFPGMSRDELLRVLDLCRDEVTLEYERSQELLASMQETTAGYAALFALVDLWRSHSDEERRAISDTSFELAETLDRLHAQLAAVSIQKGSELLANLYHLPH
Ga0187775_1015760223300017939Tropical PeatlandMRQSEHRATEVAKTLSRFIKADLAEDLSLTMIKRKFPGMSGEELLRVLAICQDEATLEYERSQELLASMRETTAGYVALLALVDLWRSQSEEHRRMIGRISSELANTLDKLQAQWAASSRHKGWELLANLASQDQPQCGRDDPRV
Ga0187819_1022212823300017943Freshwater SedimentMGPTQHRATEVAKTLSRFIKADLAEDLSLAMINRKFPGMSREELLRVLAICQDEAVLEFERSQEVLASMRETTAGYAALFSLLDLWRSHSEEQRRVISDASSELANTLDKLQAQLAASSRHKSWELLANVTSQGPH
Ga0187819_1066916513300017943Freshwater SedimentMGQAHYRSTEVAKTLSRFIKADLAEGLALALIHRKFPGMSRDELLRVLDICKDEATLEYERSQELLASMLETTAGYAALFALVDLWRSHSEEQRRVISDASFELAETLDRLDAQLAAASTQKGPELLANLYKPTTALMR
Ga0187817_1000778033300017955Freshwater SedimentMGHTQHRATEVAKTLGRFIKADLAEGLSLALLHHKFPGMTRDEILHVLDICKDEATLEYERSQEVLASMRETTAGYAALFGLLDLWRSQSEEQRQLIKEASFELTETLERLETQFAEASRYTGAELLANIHQQKHNLMRP
Ga0187817_1038708413300017955Freshwater SedimentMGQTQHRATEVAKTLSRFIKADLAEGLSLALIHRKFPRMTRDEILRVLDICKDEAALEYERAQEVLASMRETTAGYAALFALLDLWRAQSEEQRRRISEASFELAETLDRLETQFAEASRYTGAELLANIHQQKHNLMR
Ga0187779_1100271113300017959Tropical PeatlandMGHIQHRATEVAKTLSRFIKADLAEGLSLALIHRKFPGMTRDEILRVLDICKDEATLEYERSQEVLASMQETTAGYTALFALLDLWRSQSEDQRRLISEASFELAETLDRLETQF
Ga0187778_1116910123300017961Tropical PeatlandMGQTRHRATEVAKTLSRFIKADLAEALSLALIHRKFPGMTRDEILRVLGICKDEATLEYERSQEVLATMQETTAGYAALFALLDLWRAQSEEQRRLISEASFELAETLDRLETQFAESSRYEGAELLANIH
Ga0187776_1027606723300017966Tropical PeatlandMAHTQHRASEVAKTLSRFIKADLAEGLSLALLHRKFPGMTRDEILHVLDICKDEATLEYERSQEVLASLQETTAGYAALFGLLDLWRSQSEEQRRLIKEASSELTETLDRLETQFAEASRYMGAELLANIHRRKHNLMWP
Ga0187776_1040635123300017966Tropical PeatlandMRQSQHRATEVAKTLSRFIKADLAEDLSLAMINRKFPGLSGEELLRVLAICQDEATLEYERSQELVASMRETTAAYAALLALVDLWRSQSEEHRRMIGRISSELANTLDKLQAQWAASSRHMGWELLADLTSQGQPQCGRDAPRV
Ga0187777_1011037923300017974Tropical PeatlandMGQTQHRATEVAKTLGRYIKADLAEGLSLALINRKFPGMTREELSRVLAICQDDATLEYERTQEMLASMRETTAGYAALHALVDLWRSQSEEARSAIREASAEFAEVLNRLQAQLKTAPAQKGSELLANLTPTPA
Ga0187777_1024342523300017974Tropical PeatlandMGHIQHRATEVAKTLSRFIKADLAEGLSLALIHRKFPGMTRDEILRVLDICKDEATLEYERSQEVLASMQETTAGYTALFALLDLWRSQSEDQRRLISEASFELAETLDRLETQFAEASRYEGAELLANIHRQKHNLMWP
Ga0187777_1043797433300017974Tropical PeatlandMSQTQYRATEVAKMLSRLIKADLAEDLSLDLINRKFPGLSREELLRILAICQDEAALEYERSQELLASMRKQRQANAALSALLDLWRSHSKKQRRVIGHASSELAETLDSLQAQLADSSRCKGAELLASLNQ
Ga0187777_1099026713300017974Tropical PeatlandMGHSQHRATEVAKTLSRFIKADLAEGLSLALIHRKFPGMTRDEILHVLDICKDEAKLEYERAQEVLASMQETTAGYAALFGLLDLWRTQSEEQRRLIREASFELAETLDRLETQFAESPRYPGAELLANLHRRKHDLMWP
Ga0187777_1102241513300017974Tropical PeatlandMGQTQHRATDVAKTLSRFIKADLAEGLSLALIHRKFPGMTRDEILHVLDICKDEATLEYERSQEVLATMQETTAGYAALFALLDLWRAQSEEQRHLISDASFELAETLDRLETQFAESSRCEAAELLANIHRRKHNLMWP
Ga0187816_1017733213300017995Freshwater SedimentMGQAHYRATEVAKTLGRFIKADLAEGLALALIHRKFPGMSRDELLRVLDLCRDEVTLEYERSQELLASMQETTAGYAALFALVDLWRSHSDEERRAVSDTSFELAETLDRLHAQLAAASTQKGSELLANLYHLPH
Ga0187816_1027177413300017995Freshwater SedimentMGPTQHRATEVAKTLSRFIKADLAEDLSLAMINRKFPGMSREELLRVLAICQDEAVLELQRSQEVLASMRETTAGYAALFSLLNLWRSHSEEQRRVISDASSELANTLDKLQAQLAASSRHKSWELLANVTS
Ga0187767_1005119223300017999Tropical PeatlandMRQSQHRATEVAKTLSRFIKADLAEDLSLSMINRKFPGLSGEELLRVLAICQDEATLEYERSQELLASMRETTAGYVALLALVDLWRSQSEEHRRMIGRISSELANTLDKLQAQWADSSRYEGWKLLANLTSQDQPQCGRDDPRV
Ga0187766_1013297933300018058Tropical PeatlandVAKTLSRFIKADLAEGLSLALIHRKFPGMTRDEILHVLDICKDEATLEYERSQEVLATMQETTAGCAALFALLDLWRSQSEEQRRLIKEASFELAETLDRLETQFAEAPRYHGAELLASLHRRKHDLMWP
Ga0187766_1072259013300018058Tropical PeatlandKADLAEDLSLAMINRKFPGLSGEELLRVLAICQDEATLEYERSQELVASMRETTAGYVALLALVDLWRSQSEEHRRMIGRISSELANTLDKLQAQWADSFRYEGWELLADLTSQGQPQCGRDAPRV
Ga0187765_1090055023300018060Tropical PeatlandMGHTQHRATEVAKTLSRFIKADLAEGLSLALVHRKFPGMTRDEILHVLDICKDEATLEYERSQEVLATMQETTAGCAALFALLDLWRSQSEEQRRLIKEASFELAETLDRLETQFAEAPRYPGAELLASLHRRKHDLM
Ga0187765_1132207813300018060Tropical PeatlandMGQTQHRATEVAKTLGRYIKADLAEGLSLALINRKFPGMTREELSRVLAICQDDATLEYERTQEMLASMRETTAGYAALHALVDLWRSQPEEARSAIREASAEFAEVLNRLHAQLKTAPAQKGSE
Ga0187773_1034824013300018064Tropical PeatlandMGHSQHRATEVAKTLSRFIKADLAEGLSLALIHRKFPGMTRDEILHVLDICKDEATLEYERSQEVLASMQETTAGYAALFGLLDLWRSQSEEQRRLIKEASSELTETLDRLETQFAEASRYMGAELLANIHRQKHNLMWP
Ga0190272_1145302913300018429SoilMMEKGKPLWPGCMDFGKVEIYRTRGLTMGQTHYRATEVAETLSKFIKADLAEDLSLAMIRRKFPGLSGEELLRVFAICQDEAVLEYERSQELLANMRETTAGYAALFALADLWRSHSEEQRRLIGDASSELATTLDQLNEHLAASSRDKGWELLAKLVS
Ga0190275_1006290323300018432SoilMGQAQHRATEVAATLSRFIKADLAEGLSLAMINREFPGISREDLLRVFAICQDEVVLEFERSQELLANMRETTAGYAALIALVDLWRSHSDEQRRLIRDASSELANTLDQLNQHLAATSRYKGWELLANLVS
Ga0190275_1071138423300018432SoilMGQTHYRATEVAKTLSKFIKADLAEDLALAMIHRKFPGLSSEELLRVFAICQDDAVLEYERSQELLANMRETTAGYAALFALADLWRSHSEEQRRLISDASPELADTLDQLNEHLAASSRDRGWELLANLVS
Ga0190270_1327915413300018469SoilMGQTHYRATEVPEPLSRFIKADLAEDLSLAMIHRKFPGLSSEELLRVFAICQDDAVLEYERSQELLANMRETTAGYAALFALADLWRSHSEEQRRLIGDASSELATTLDRLNEHLAASSRDKGWELLAN
Ga0209585_1034296213300025891Arctic Peat SoilRFIKADLAEDLSLAMINRKFPGISHEDLLRVFAICQDEAVLEYERSQELLANMRETTAGYAALFALVDLWRSHSEEQRRLISDASSEFADTLDQLSEHLAASSRDKGWELLANLVS
Ga0207684_1071379513300025910Corn, Switchgrass And Miscanthus RhizosphereLALALINNKFPGMSGEEILRVFGICQDEAALEYECSQEVLASMRETTTGYAALFALVDLWRSQSEAQRRAVSDASFELAETLNRLQAQLETTSTQKGSQLLANLYSQRPINAAAMIPKSD
Ga0209068_1049149213300027894WatershedsMGQTQYRATEVAKTLGRYIKADLAEGLSLALINRKFPGMTREELSRVLAICKDEATLDYERAQEMLVSMRETTAGYAALFALVDLWRSQSEEVRSAICDASIDLAEALNTLQAQLAAAPAQKGAELLANLLPTPA
Ga0209067_1006880933300027898WatershedsMGQTQYRATEVAETLGRYIKADLAEGLSLALINRKFPGMTRDELSRVLAICKDEATLEYERAQEMLVSMRETTAGYAALFALVDLWRSQSEEVRSAICDASIDLAEALNTLQAQLAAAPAQKGAELLANLLPTPA
Ga0209067_1010611023300027898WatershedsMGQTQYRATEVAKTLGRYIKADLAEGLSLALINGKFPGMTRDELSRVLAICKDEATLDYERAQEMLMSMRETTAGYAALFSLIDLWRSQSEEVRSAIGQASTEFAELLNRLQAQLAAAPAQKDWQLLANLLPTPS
Ga0209067_1012929923300027898WatershedsMGQQYRATEVAKTLSRFIKADLAEGLSLALIHRKFPGMSRDELLRVFDICKDEATLEYERAHEVLASMRETTAGYAALFALVDLWRSQSEEQRRLISEASFELAETLDRLQAQLTDLPSQKGAELLTNFQRRKHTLV
Ga0209067_1058786013300027898WatershedsMRQTQHRVTEVAKTLSRFIKADLAEDLSLAMINRKFPGMSGEELLRVLAICQDEATLEYERSQELVASMRETTAGYGALLALVDLWRSQSEQHRRMIGRISSELANTLDKLQTQWAASSRHGGWELLADLTSQGQPQCGRDDPRV
Ga0209067_1064019313300027898WatershedsLALINSKFPGMSGEELLRVFGICQDEAALEYERSQEVLASVRETTTGYAALFALVDLWRSQSEEQRRAISDASFELAETLNRLQAQLATTSTQKGAQLLANLYSQRKINAAVMIPKSD
Ga0209583_1002665243300027910WatershedsMGQTQYRATEVAKTLGRYIKADLTEGLSLALINRKFPGMTREELSRVLAICKDEATLDYERAQEMLVSMRETTAGYAVLFALIDLWRSQSEEVRSAIGEASAEFAEVLNRLQAQLAAASAQKGSELLANLLPTSA
Ga0209583_1009350513300027910WatershedsMRQTQYRATEVAQTLGRYIKADLAEGLSLDLINRSFPGITREELSRVLAICKDEAMLEYERTQEMLASMRETTMGYAALFALIDLWRSQSEEVRSAIGEASAEFAEVLNRLQAQLSAAPAQKGSELLANLLPMPA
Ga0209583_1047174213300027910WatershedsMGQTQYRSTEVAKTLSLFIKADLADDLALALINSKFPGMSGEELLRVFGICQDEAALEYERSQEVLASVRETTTGYAALFALVDLWRSQSEEQRRAISDASFELAETLNRLQAQLVTTSAQKGAQL
Ga0209698_1006938223300027911WatershedsMGQPQHRTNEVAKTLGRFIKADLAEGLSLALIHRKFPGISRDELLRVLDICKDEATLEYERTQEMLASMGEMTAGFAALFALLDLWRSHSKEQRRAISDASGQLAEMLDKLQAQLVAAPRRRGWSYWRVCTPAALVRA
Ga0209698_1014379923300027911WatershedsMGQTQYRATEVAKTLSRFIKADLADGLALILINRKFPGISREELLRVLDICKDEATLEYERSQELLASMRETTTGYAALFALVDLWRSHSEEQRRSIGLASSELATTLDKLQAEFAVSSRHKGWELLANFTSQRPH
Ga0209698_1077717213300027911WatershedsMGQTQYRATEVAETLGRYIKADLAEGLSLALINRKFPGMTRDELSRVLAICKDEATLEYERAQEMLVSMRETTAGYAALFALVDLWRSQSEEVRSAICDASIDLAEALNTLQAQLAAAPAQKGAELLANLLPT
Ga0209069_1007078113300027915WatershedsMGQTQYRATEVAKTLGRYIKADLTEGLSLALINRKFPGMTREELSRVLAICKDEATLDYERAQEMLVSMRETTAGYAVLFALIDLWRSQSEEVRSAIGEASAEFAEVLNRLQEQLAAASAQKGSELLANLLPTSA
Ga0209069_1018804523300027915WatershedsMRQTQYRATEVAQTLGRYIKADLAEGLSLDLINRSFPGITREELSRVLAICKDEATLEYERTQEMLASMRETTMGYAALFALIDLWRSQSEEVRSAIGEASAEFAEVLNRLQAQLSAAPAQKGSELLANLLPMPA
Ga0310884_1052194923300031944SoilMGQAHYRATEVAETLSRFIKADLAEDLSLAMIHREFPGLSSEELLRVFAICQDEAVLEYERSQELLANMRETTAGYAALFALVDLWRSHSEEQRRLISDVSSELVDTLD
Ga0335070_1037597513300032829SoilMGHTQHRATEVAKTLSRFIKADLAEGLSLALLHRKFPGMTRDEILHVLDICKDEATLEYERAQEVLASMRETTAGYAALFGLLDLWRSQTEEQRRRIKEASFELTETLDRLETQFAESPGYPGAELLANLHRRKHDLMWP
Ga0335081_1164484613300032892SoilMGQTQYRATEVAKTLSRFIKADLAEGLSLALIHRKFPGMTRDEILHVPDICKDEATLEYERAQEVLASMRETTAGYAALFGLLDLWRSQSEEQRRLISDASFELAETLNRLETHFADSSRYAGAELLPNFIAGSTT
Ga0335077_1179922213300033158SoilSRFIKADLAGDLSLAMIKRKFPGISGEELLRVLAICQDEATLEYERSQELLASMRETMAGYAALLALVDLWRSQSEEHRRMIGRISSELANTLDKLQAQWASRYMGWELLADLTSQGQPQCGRDAPRV
Ga0370495_0097427_357_7553300034257Untreated Peat SoilMGQTHHRASEVAETLSRFIKADLAEDLSLAMIRRKFPGLSREELLRVFAICQDEVALEYERSQELLANMRETTAGYAALFALADLWRSHSAEQRRLISDASPELADTLDQLSEHLAASSRDKGWELLANLVS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.