NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F105773

Metagenome Family F105773

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105773
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 82 residues
Representative Sequence MDRKTIRLQARLGAIEYMIAELFKKFYEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR
Number of Associated Samples 92
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 62.00 %
% of genes near scaffold ends (potentially truncated) 49.00 %
% of genes from short scaffolds (< 2000 bps) 79.00 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (55.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil
(11.000 % of family members)
Environment Ontology (ENVO) Unclassified
(33.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 82.56%    β-sheet: 0.00%    Coil/Unstructured: 17.44%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF14347DUF4399 5.00
PF03401TctC 2.00
PF13432TPR_16 2.00
PF01575MaoC_dehydratas 2.00
PF13414TPR_11 2.00
PF13417GST_N_3 2.00
PF05118Asp_Arg_Hydrox 1.00
PF13282DUF4070 1.00
PF13505OMP_b-brl 1.00
PF00069Pkinase 1.00
PF07719TPR_2 1.00
PF03706LPG_synthase_TM 1.00
PF04909Amidohydro_2 1.00
PF12860PAS_7 1.00
PF04964Flp_Fap 1.00
PF03781FGE-sulfatase 1.00
PF02910Succ_DH_flav_C 1.00
PF13410GST_C_2 1.00
PF05239PRC 1.00
PF13091PLDc_2 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 4.00
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 2.00
COG0392Predicted membrane flippase AglD2/YbhN, UPF0104 familyCell wall/membrane/envelope biogenesis [M] 1.00
COG1262Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domainPosttranslational modification, protein turnover, chaperones [O] 1.00
COG3555Aspartyl/asparaginyl beta-hydroxylase, cupin superfamilyPosttranslational modification, protein turnover, chaperones [O] 1.00
COG3847Flp pilus assembly protein, pilin FlpExtracellular structures [W] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A55.00 %
All OrganismsrootAll Organisms45.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c0666192All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1350Open in IMG/M
3300000787|JGI11643J11755_11327196All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium518Open in IMG/M
3300000881|JGI10215J12807_1368427Not Available581Open in IMG/M
3300000891|JGI10214J12806_10677278Not Available1082Open in IMG/M
3300001990|JGI24737J22298_10044267Not Available1361Open in IMG/M
3300003324|soilH2_10254982Not Available1182Open in IMG/M
3300004156|Ga0062589_101100052All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales752Open in IMG/M
3300004156|Ga0062589_101810590All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales613Open in IMG/M
3300004157|Ga0062590_100517770All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1022Open in IMG/M
3300004479|Ga0062595_102355202All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria527Open in IMG/M
3300005093|Ga0062594_101157989All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales762Open in IMG/M
3300005103|Ga0066813_1007758Not Available612Open in IMG/M
3300005162|Ga0066814_10004141Not Available1477Open in IMG/M
3300005168|Ga0066809_10118512Not Available663Open in IMG/M
3300005290|Ga0065712_10001636All Organisms → cellular organisms → Bacteria10202Open in IMG/M
3300005290|Ga0065712_10150632All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1372Open in IMG/M
3300005293|Ga0065715_10000891All Organisms → cellular organisms → Bacteria → Proteobacteria15781Open in IMG/M
3300005293|Ga0065715_10109892All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae2647Open in IMG/M
3300005330|Ga0070690_100024974All Organisms → cellular organisms → Bacteria3678Open in IMG/M
3300005330|Ga0070690_100114812All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1801Open in IMG/M
3300005338|Ga0068868_101276058Not Available681Open in IMG/M
3300005345|Ga0070692_10003123All Organisms → cellular organisms → Bacteria → Proteobacteria6641Open in IMG/M
3300005434|Ga0070709_10015284All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter4365Open in IMG/M
3300005439|Ga0070711_100378782All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa → Methylocapsa sp. S1291144Open in IMG/M
3300005441|Ga0070700_100003740All Organisms → cellular organisms → Bacteria7869Open in IMG/M
3300005456|Ga0070678_101096420Not Available735Open in IMG/M
3300005457|Ga0070662_101254155All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae638Open in IMG/M
3300005466|Ga0070685_10203927Not Available1287Open in IMG/M
3300005518|Ga0070699_100785193Not Available871Open in IMG/M
3300005535|Ga0070684_101840946Not Available571Open in IMG/M
3300005547|Ga0070693_101063937All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales615Open in IMG/M
3300005563|Ga0068855_100906745Not Available931Open in IMG/M
3300005564|Ga0070664_100074243Not Available2919Open in IMG/M
3300005618|Ga0068864_100946940All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales852Open in IMG/M
3300006173|Ga0070716_100169317All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1424Open in IMG/M
3300006755|Ga0079222_12108052All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300006804|Ga0079221_10475617All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales802Open in IMG/M
3300009093|Ga0105240_10548030All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1280Open in IMG/M
3300010358|Ga0126370_10869676Not Available811Open in IMG/M
3300010371|Ga0134125_10885310All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales981Open in IMG/M
3300010373|Ga0134128_10003802All Organisms → cellular organisms → Bacteria18494Open in IMG/M
3300010396|Ga0134126_10105287All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3464Open in IMG/M
3300010398|Ga0126383_11296507Not Available818Open in IMG/M
3300010399|Ga0134127_10012697All Organisms → cellular organisms → Bacteria → Proteobacteria6306Open in IMG/M
3300010403|Ga0134123_12301681Not Available602Open in IMG/M
3300012891|Ga0157305_10016261Not Available1279Open in IMG/M
3300012893|Ga0157284_10296689Not Available528Open in IMG/M
3300012897|Ga0157285_10018522Not Available1456Open in IMG/M
3300012984|Ga0164309_11759316Not Available532Open in IMG/M
3300012985|Ga0164308_12035708Not Available535Open in IMG/M
3300012987|Ga0164307_11233408Not Available621Open in IMG/M
3300014326|Ga0157380_10142103Not Available2064Open in IMG/M
3300014968|Ga0157379_10293244Not Available1481Open in IMG/M
3300017792|Ga0163161_10281199Not Available1305Open in IMG/M
3300017927|Ga0187824_10055425All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_71227Open in IMG/M
3300017930|Ga0187825_10062310All Organisms → cellular organisms → Bacteria1268Open in IMG/M
3300017936|Ga0187821_10416469All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales552Open in IMG/M
3300017944|Ga0187786_10013092All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter2066Open in IMG/M
3300017944|Ga0187786_10072104Not Available1098Open in IMG/M
3300017947|Ga0187785_10475614Not Available617Open in IMG/M
3300017947|Ga0187785_10595376Not Available566Open in IMG/M
3300017973|Ga0187780_10467682Not Available899Open in IMG/M
3300017994|Ga0187822_10032924All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_71388Open in IMG/M
3300018064|Ga0187773_10494329Not Available728Open in IMG/M
3300019356|Ga0173481_10006219Not Available3211Open in IMG/M
3300019361|Ga0173482_10000089All Organisms → cellular organisms → Bacteria12847Open in IMG/M
3300022880|Ga0247792_1000001All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales70294Open in IMG/M
3300023077|Ga0247802_1034826Not Available756Open in IMG/M
3300025911|Ga0207654_10255871Not Available1175Open in IMG/M
3300025911|Ga0207654_10492139All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300025930|Ga0207701_10144069All Organisms → cellular organisms → Bacteria → Proteobacteria2114Open in IMG/M
3300025933|Ga0207706_11110570All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales660Open in IMG/M
3300025938|Ga0207704_10354285All Organisms → cellular organisms → Bacteria1144Open in IMG/M
3300025940|Ga0207691_10075146Not Available3047Open in IMG/M
3300025945|Ga0207679_10927955Not Available797Open in IMG/M
3300025949|Ga0207667_11150270Not Available757Open in IMG/M
3300025972|Ga0207668_10071830All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2474Open in IMG/M
3300026035|Ga0207703_10429483All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1231Open in IMG/M
3300026089|Ga0207648_11628525All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium606Open in IMG/M
3300026142|Ga0207698_10729401Not Available988Open in IMG/M
3300026793|Ga0207441_103176Not Available669Open in IMG/M
3300026814|Ga0207586_103744Not Available570Open in IMG/M
3300026861|Ga0207503_1002026Not Available998Open in IMG/M
3300026873|Ga0207620_1005065Not Available899Open in IMG/M
3300026944|Ga0207570_1001488Not Available1366Open in IMG/M
3300027115|Ga0207488_103178Not Available505Open in IMG/M
3300028381|Ga0268264_10660751Not Available1035Open in IMG/M
3300028577|Ga0265318_10403149Not Available500Open in IMG/M
(restricted) 3300031150|Ga0255311_1084408Not Available681Open in IMG/M
(restricted) 3300031197|Ga0255310_10054254Not Available1048Open in IMG/M
3300031231|Ga0170824_101631027All Organisms → cellular organisms → Eukaryota → Amoebozoa → Tubulinea → Elardia → Arcellinida → Sphaerothecina → Arcellidae → Arcella → Arcella intermedia1337Open in IMG/M
3300031241|Ga0265325_10000053All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales77918Open in IMG/M
3300031241|Ga0265325_10532620Not Available508Open in IMG/M
3300031249|Ga0265339_10137604Not Available1245Open in IMG/M
3300031716|Ga0310813_10324846All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601304Open in IMG/M
3300031854|Ga0310904_10037436Not Available2317Open in IMG/M
3300031908|Ga0310900_10157987Not Available1544Open in IMG/M
3300031996|Ga0308176_12389741Not Available564Open in IMG/M
3300032075|Ga0310890_11726415Not Available519Open in IMG/M
3300032828|Ga0335080_11927302Not Available574Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil11.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland6.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil5.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere4.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere4.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.00%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.00%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.00%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000787Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000881Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300001990Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3Host-AssociatedOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005103Soil and rhizosphere microbial communities from Laval, Canada - mgLAAEnvironmentalOpen in IMG/M
3300005162Soil and rhizosphere microbial communities from Laval, Canada - mgLABEnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012891Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2EnvironmentalOpen in IMG/M
3300012893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017944Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MGEnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300022880Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6EnvironmentalOpen in IMG/M
3300023077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026793Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A3a-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026814Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3-10 (SPAdes)EnvironmentalOpen in IMG/M
3300026861Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A5a-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026873Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026944Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K2-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027115Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A3-11 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028577Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaGHost-AssociatedOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031249Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaGHost-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_066619233300000033SoilMSDPEALPPVLFDHRAGTSNMDKKTIRLQVRLSAIEYMIADLFKKIYEMNDVPLKKVKKDHEFLRKYLQKMTLQIPDPAXSDXTAGEMMDAFERLMEKIEMAVRR*
JGI11643J11755_1132719623300000787SoilMSDPEALPPVLFDHRAGTSNMDKKTIRLQVRLSAIEYMIADLFKKIYEMNDVPLKKVKKDHEFLRKYLQKMTLXIPDPAXSDXTAGEMMDAFERLMEKIEMAVRR*
JGI10215J12807_136842713300000881SoilDRKTIRLQARLGAIEYMIAELFKKFYEINDVSFKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR*
JGI10214J12806_1067727823300000891SoilMIAELFKKFYEINDVSFKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMKKIEMAVRRR*
JGI24737J22298_1004426723300001990Corn RhizosphereMIAELFKKFYEINDVSXKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR*
soilH2_1025498223300003324Sugarcane Root And Bulk SoilLDRKAFKLEARLGAIEYMIAELFKKFYAMSGTPLKDVRKDHEVLRKYLRKMSLPIPDPALSDLTAGEMMDAFENLMEKIEIAVDRR*
Ga0062589_10110005213300004156SoilLPPVLFDHRPGTRDMDKKTIRLQARLGAIEYMIAELFKKIYEMNDVPLKEVQKDHEFLRRYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR
Ga0062589_10181059023300004156SoilMSDPEALPPVLFDHRAGTSNMDKKTIRLQVRLSAIEYMIADLFKKIYEMNDVPLKKVKKDHEFLRKYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR*
Ga0062590_10051777023300004157SoilLIRSGTSNMDKKTIRLQARLGAIEYMIAELFKKVYEMNDVPLRDVRKDHEFLRKYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR*
Ga0062595_10235520223300004479SoilVSNPAALASRLIRSGTSNMDKKTIRLQARLGAIEYMIAELFKKVYEMNDVPLRDVRKDHEFLRKYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR
Ga0062594_10115798923300005093SoilMDKKTIRLQARLGAIEYMIAELFKKIYEMNDVPLKEVQKDHEFLRRYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR
Ga0066813_100775823300005103SoilYMIAGLFKKFYEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERRMEKIEMAVRRR*
Ga0066814_1000414113300005162SoilMDRKTIRLQARLGAIEYMIAGLFKKFYEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMKKIEMAVRRR*
Ga0066809_1011851213300005168SoilMDRKTIRLQARLGAIEYMIAGLFKKFYEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERRMEKIEMAVRRR*
Ga0065712_1000163643300005290Miscanthus RhizosphereMIAELFKKFYEINDVSFKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR*
Ga0065712_1015063233300005290Miscanthus RhizospherePLPPVLFDHRAGTRDMDKKTIRLQARLGAIEYMIAELFKKIYEMNDVPLKEVQKDHEFLRRYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR*
Ga0065715_10000891143300005293Miscanthus RhizosphereMIAELFKKFXEINDVSXKQVQKEHEFLRTYLXKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR*
Ga0065715_1010989213300005293Miscanthus RhizosphereLRPVLFDHRAGTRDMDKKTIRLQARLGAIEYMIAELFKKIYEMNDVPLKEVQKDHEFLRRYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR*
Ga0070690_10002497443300005330Switchgrass RhizosphereMIAELFKKFYEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR*
Ga0070690_10011481233300005330Switchgrass RhizosphereMDKKTIRLQARLGAIEYMIAELFKKIYEMNDVPLKEVQKDHEFLRRYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR*
Ga0068868_10127605813300005338Miscanthus RhizosphereMIAELFKKFCEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR*
Ga0070692_1000312323300005345Corn, Switchgrass And Miscanthus RhizosphereMIAELFKKFCEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMKKIEMAIRRR*
Ga0070709_1001528443300005434Corn, Switchgrass And Miscanthus RhizosphereMDKKAFKLAARLSAIEYMIADLFKKIYVMSGTSYKEVSKEHDLLRKHLRKMSLPIPDPAMSDLTAGEMMDAFEKLLEKIEVAVQRR*
Ga0070711_10037878243300005439Corn, Switchgrass And Miscanthus RhizosphereMDKKAFKLAARLSAIEYMIADLFKKIYAMSGTPYKEVAKEHELLRKHLRKMSLPIPDPAMSDLTAGEMMDAFEKLLE
Ga0070700_100003740103300005441Corn, Switchgrass And Miscanthus RhizosphereMIAELFKKFYEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFER
Ga0070678_10109642023300005456Miscanthus RhizosphereMDRKTIRLQARLGAIEYMIAELFKKFYEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAV
Ga0070662_10125415513300005457Corn RhizosphereLQARLGAIEYMIAELFKKIYEMNDVPLKEVQKDHEFLRRYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR*
Ga0070685_1020392723300005466Switchgrass RhizosphereMDRKTIRLQARLGAIEYMIAELFKKFYEINDVSFKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR*
Ga0070699_10078519313300005518Corn, Switchgrass And Miscanthus RhizosphereMDRKAIKLEARLGAIEYMIAELFKKFYAMSETHYKEVEKEHEMLRKYLRKMTLPIPDPALSDLTAGEMMDAFEVLLEKIEIAVRR*
Ga0070684_10184094613300005535Corn RhizosphereMDKKAFKLAARLSAIEYMIADLFKKIYAMNGTPYKEVAKDHDLIRKHLRKMSLPIPDPAMSDLTAGEMMDAFEQLLEKIEIAVQRR*
Ga0070693_10106393713300005547Corn, Switchgrass And Miscanthus RhizosphereIEYMIAELFKKIYEMNDVPLKEVQKDHEFLRRYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR*
Ga0068855_10090674523300005563Corn RhizosphereMDRKTIRLQARLGAIEYMIAELFKKFYEINDVSLRQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR*
Ga0070664_10007424313300005564Corn RhizosphereMDRKTIRLQARLGAIEYMIAELFKKFYEINDVSFKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDA
Ga0068864_10094694023300005618Switchgrass RhizosphereMDKKTIRLQARLGAIEYMIAELFKKVYEMNDVPLRDVRKDHEFLRKYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR*
Ga0070716_10016931723300006173Corn, Switchgrass And Miscanthus RhizosphereMDKKAFKLAARLSAIEYMIADLFKKIYAMSGTPYKEVAKEHELLRKHLRKMSLPIPDPAMSDLTAGEMMDAFEKLLEKIEVAVQRR*
Ga0079222_1210805213300006755Agricultural SoilMDRKAIKLEARLGAIEYMIAELFKKFYAMSETHYKEVEKEHEMLRKYLRKMTLPIPDPALSDLTAGEMMDAFEVLLEKIEIA
Ga0079221_1047561723300006804Agricultural SoilARLGAIEYMIAELFKKFYAMSETHYKEVEKEHEMLRKYLRKMTLPIPDPALSDLTAGEMMDAFEVLLEKIEIAVRR*
Ga0105240_1054803013300009093Corn RhizosphereIKLEARLGAIEYMIAELFKKFYAMSETHYKEVEKEHEMLRKYLRKMTLPIPNPALSDLTAGEMMDAFEVLLEKIEIAVRR*
Ga0126370_1086967623300010358Tropical Forest SoilDLFTKIYAMNGTPYKEIAREHDLLRKHLRKMSLPIPDPAMSDLTAGEMMEAFEKLMEKIEVAIKRR*
Ga0134125_1088531013300010371Terrestrial SoilHNMDKKTIRLQARLGAIEYMIAELFKKIYEMNDVPLKEVQKDHEFLRKYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR*
Ga0134128_10003802123300010373Terrestrial SoilMLRFRDRISTINRQRENQRADMDRKAIKLEARLGAIEYMIAELFKKFYAMSETHYKEVQKEHEMLRKYLRKMTLPIPDPALSDLTAGEMMDAFEVLLEKIEIAVRR*
Ga0134126_1010528713300010396Terrestrial SoilRENQRADMDRKAIKLEARLGAIEYMIAELFKKFYAMSETHYKEVQKEHEMLRKYLRKMTLPIPDPALSDLTAGEMMDAFEVLLEKIEIAVRR*
Ga0126383_1129650723300010398Tropical Forest SoilMDKKAFKLAARLSAIEYMIADLFTKIYAMNGTSYKDVTREHDLLRKHLRKMSLPIPDPAMSDLTAGEMMDAFERLMEKIEVAIKRR*
Ga0134127_1001269743300010399Terrestrial SoilMIAELFKKFYEINDVSFKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMKKIEMAIRRR*
Ga0134123_1230168113300010403Terrestrial SoilIRRPLPPVLFDHRAGTRDMDKKTIRLQARLGAIEYMIAELFKKIYEMNDVPLKEVQKDHEFLRRYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR*
Ga0157305_1001626113300012891SoilGLKVTTTDRKTIRLQARLGAIEYMIAELFKKFYEINDVSFKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR*
Ga0157284_1029668913300012893SoilVQATGRVEENHDYRQMSDPEALPPVLFDHRAGTSNMDKKTIRLQVRLSAIEYMIADLFKKIYEMNDVPLKKVKKDHEFLRKYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR
Ga0157285_1001852223300012897SoilMDRKTIRLQARLGAIEYMIAELFKKFYEINDVSLRQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMKKIEMAIRRR*
Ga0164309_1175931613300012984SoilMDKKAFKLAARLSAIEYMIADLFKKFYAMSGTPYKEVAKEHELLRKHLRKMSLPIPDPAMSDLTAGEMMDAFEKLLEKIEIAVQRR*
Ga0164308_1203570823300012985SoilMDKKAFKLAARLSAIEYMIADLFKKIYVMSGTPYKEVAKEHELLRKHLRKMSLPIPDPAMSDLTAGEMMDAFEKLLEKIEVAVQRR*
Ga0164307_1123340813300012987SoilREANMDKKAFKLAARLSAIEYMIADLFKKIYAMSGTPYKEVAKEHELLRKHLRKMSLPIPDPAMSDLTAGEMMDAFEKLLEKIEVAVQRR*
Ga0157380_1014210323300014326Switchgrass RhizosphereMDRKTIRLQARLGAIEYMIAELFKKFYEIHDVSFKQVQKEHEFLRAYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR*
Ga0157379_1029324433300014968Switchgrass RhizosphereMDRKTIRLQARLGAIEYMIAELFKKFYEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR*
Ga0163161_1028119913300017792Switchgrass RhizosphereMDRKTIRLQARLGAIEYMIAELFKKFYEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIE
Ga0187824_1005542523300017927Freshwater SedimentMLSFRDRVSTIDCQRENQRADMDRKAIKLEARLGAIEYMIAELFKKFYAMSETHYKEVEKENEMLRKYLRKMTLPIPDPALSDLTAGEMMEALASGR
Ga0187825_1006231023300017930Freshwater SedimentMDRKAIKLEARLGAIEYMIAELFKKFYAMSETHYKEVEKEHEMLRKYLRKMTLPIPDPALSDLTAGEMMDAFEVLLEKIEIAVRR
Ga0187821_1041646913300017936Freshwater SedimentEYMIAELFKKFYAMSETHYKEVEKEHEMLRKYLRKMTLPIPDPALSDLTAGEMMDAFEVLLEKIEIAVRR
Ga0187786_1001309223300017944Tropical PeatlandMDKKAFKLAARLSAIEYMIADLFKKIYAMSGTSYKEVVKDHELLRNHLRKMSLPIPDPAMSDLTAGEMMDAFEKLMEKIEIAVRRR
Ga0187786_1007210423300017944Tropical PeatlandMDKKAFKLAARLSAIEYMIADLFKKIYAMSGTSYKDVVKDHELLRRHLRKMSLPIPDPAMSDLTAGEMMDAFEKLMEKIETAVRRR
Ga0187785_1047561413300017947Tropical PeatlandMDKKAFKLAARLSAIEYMIADLFKKIYAMSGTSYKEVVKDHELLRNHLRKMSLPIPDPAMSD
Ga0187785_1059537613300017947Tropical PeatlandMDKKAFKLAARLSAIEYMIADLFKKIYVMSGTSYKEVVKDHELLRKHLRKMSLPIPDPAMSDHTAGEMMDAFEKLMEKIEIAVRRR
Ga0187780_1046768213300017973Tropical PeatlandMDKKAFKLAARLSAIEYMIADLFKKIYAMNGTSYKEVAKDHELLRKHLRKISLPIPDPAMSDLTAGEMMDAFEKLMEKIEIAVRRR
Ga0187822_1003292423300017994Freshwater SedimentMLSFRDRVSTIDCQRENQRADMDRKAIKLEARLGAIEYMIAELFKKFYAMSETHYKEVEKEHEMLRKYLRKMTLPIPDPALSDLTAGEMMDAFEVLLEKIEIAVRR
Ga0187773_1049432913300018064Tropical PeatlandTRVANMDKKAFKLAARLSAIEYMIADLFKKIYATNGTSYKEVVKEHDVLRKHLRKMSLPIPDPAISDLTAGEMMDAFEKLMEKIEIAVKRR
Ga0173481_1000621943300019356SoilMDRKTIRLQARLGAIEYMIAELFKKFYEINDVSFKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR
Ga0173482_10000089123300019361SoilMIAELFKKFYEINDVSFKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR
Ga0247792_1000001583300022880SoilMIAELFKKFCEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR
Ga0247802_103482613300023077SoilMIAELFKKFYEINDVSFKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFER
Ga0207654_1025587113300025911Corn RhizosphereMIAELFKKFYEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR
Ga0207654_1049213923300025911Corn RhizosphereLPPVLFDHRAGTRDMDKKTIRLQARLGAIEYMIAELFKKIYEMNDVPLKEVQKDHEFLRRYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR
Ga0207701_1014406933300025930Corn, Switchgrass And Miscanthus RhizosphereRRPLPSVLFDHRAGTRDMDKKTIRLQARLGAIEYMIAELFKKIYEMNDVPLKEVQKDHEFLRRYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR
Ga0207706_1111057013300025933Corn RhizosphereLQARLGAIEYMIAELFKKIYEMNDVPLKEVQKDHEFLRRYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR
Ga0207704_1035428513300025938Miscanthus RhizosphereMIAELFKKFYEINDVSFKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFEREACTG
Ga0207691_1007514633300025940Miscanthus RhizosphereMIAELFKKFYEINDVSLKQVQKEHEFLRAYLQKMTLQIPDPALSDLTAGEMMDAFERLMKKIEMAVRRR
Ga0207679_1092795513300025945Corn RhizosphereMIAELFKKFYEINDVSFKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAF
Ga0207667_1115027013300025949Corn RhizosphereVTNMDRKTIRLQARLGAIEYMIAELFKKFYEINDVSLRQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR
Ga0207668_1007183053300025972Switchgrass RhizosphereWANVVIATSRIKGHTMDRKTIRLQARLGAIEYMIAELFKKFCEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR
Ga0207703_1042948313300026035Switchgrass RhizosphereLVHVAGTRDMDKKTIRLQARLGAIEYMIAELFKKIYEMNDVPLKEVQKDHEFLRRYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRR
Ga0207648_1162852513300026089Miscanthus RhizosphereMDKKTIRLQARLGAIEYMIAELFKKIYEMNDVPLKEVQKDHEFLRRYLQKMTLQIPDPALSDLTAGEMMDAFERLME
Ga0207698_1072940123300026142Corn RhizosphereMIAELFKKFCEINDVSLKQVQKEHEFLRAYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR
Ga0207441_10317613300026793SoilMIAELFKKFYEINDVSFKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAV
Ga0207586_10374423300026814SoilMIAELFKKFYEINDVSFKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIETA
Ga0207503_100202613300026861SoilMIAELFKKFYEINDVSFKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEM
Ga0207620_100506513300026873SoilGLKVTTTDRKTIRLQARLGAIEYMIAELFKKFYEINDVSFKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR
Ga0207570_100148833300026944SoilMDRKTIRLQARLGAIEYMIAELFKKFCEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR
Ga0207488_10317813300027115SoilMIAELFKKFYEINDVSFKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMM
Ga0268264_1066075123300028381Switchgrass RhizosphereMIAELFKKFCEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERL
Ga0265318_1040314913300028577RhizosphereIEYMIADLFKKIYAMNGTPYKEVAKDHELLRKHLRKMSLPIPDPAMSDLTAGEMMDAFEKLLEKIEIAVQRR
(restricted) Ga0255311_108440823300031150Sandy SoilWLSRHRGLKVANMDRKTIRLQARLGAIEYMIAELFKKFYEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR
(restricted) Ga0255310_1005425423300031197Sandy SoilMDRKTIRLQARLGAIEYMIAELFKKFYEKSDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR
Ga0170824_10163102723300031231Forest SoilMDKKAFKLAARLSAIEYMIADLFKKIYAMSGTPYKEVAKDHELLRKHLRKMSLPIPDPAMSDLTAGEMMDAFEKLLEKIEIAVQRR
Ga0265325_10000053303300031241RhizosphereMDKKAFKLAARLSAIEYMIADLFKKIYALNGTPYKEVAKDHELLRKHLRKMSLPIPDPAMSDLTAGEMMDAFEKLLEKIEIAVQRR
Ga0265325_1053262013300031241RhizosphereMDKKAFKLAARLSAIEYMIADLFKKIYAMNGTPYKEVAKDHDLLRKHLRKMSLPIPDPAMSDLTAGEMMDAFEKLLEKIEIAVQRR
Ga0265339_1013760423300031249RhizosphereMDKKAFKLAARLSAIEYMIADLFKKIYAMNGTPYKEVAKDHELLRKHLRKMSLPIPDPAMSDLTAGEMMDAFEKLLEKIEIAVQRR
Ga0310813_1032484623300031716SoilMDRKAIKLEARLGAIEYMIAELFKKFYAMSETHYKEVQKEHEMLRKYLRKMTLPIPDPALSDLTAGEMMDAFEVLLEKIEIAVRR
Ga0310904_1003743613300031854SoilMDRKTIRLQARLGAIEYMIAELFKKFYEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR
Ga0310900_1015798713300031908SoilMIAELFKKFYEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIE
Ga0308176_1238974123300031996SoilMDKKAFKLAARLSAIEYMIADLFKKIYAMNGTSYKEVAKDHELLRKHLRKMSLPIPDPAMSDLTAGEMMDAFEKLMEKIEIAVQRR
Ga0310890_1172641513300032075SoilLGAIEYMIAELFKKFYEINDVSLKQVQKEHEFLRTYLQKMTLQIPDPALSDLTAGEMMDAFERLMEKIEMAVRRR
Ga0335080_1192730213300032828SoilDKKAFKLAARLSAIEYMIADLFKKIYAMSGTSYKEVVKDHDVLRKHLRKMSLPIPDPAMSDLTAGEMMDAFEKLLEKIEIAVQRR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.