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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F105731 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 100 |
| Average Sequence Length | 49 residues |
| Representative Sequence | MTSRNWPKQFRAAASTFDWPALAQLAAEYATHLYAIPKPPDSVGQV |
| Number of Associated Samples | 90 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 93.00 % |
| % of genes near scaffold ends (potentially truncated) | 100.00 % |
| % of genes from short scaffolds (< 2000 bps) | 95.00 % |
| Associated GOLD sequencing projects | 88 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.49 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (77.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (33.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (42.000 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 37.84% β-sheet: 0.00% Coil/Unstructured: 62.16% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.49 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF09334 | tRNA-synt_1g | 2.00 |
| PF02590 | SPOUT_MTase | 1.00 |
| PF04973 | NMN_transporter | 1.00 |
| PF06101 | Vps62 | 1.00 |
| COG ID | Name | Functional Category | % Frequency in 100 Family Scaffolds |
|---|---|---|---|
| COG0018 | Arginyl-tRNA synthetase | Translation, ribosomal structure and biogenesis [J] | 2.00 |
| COG0060 | Isoleucyl-tRNA synthetase | Translation, ribosomal structure and biogenesis [J] | 2.00 |
| COG0143 | Methionyl-tRNA synthetase | Translation, ribosomal structure and biogenesis [J] | 2.00 |
| COG0215 | Cysteinyl-tRNA synthetase | Translation, ribosomal structure and biogenesis [J] | 2.00 |
| COG0495 | Leucyl-tRNA synthetase | Translation, ribosomal structure and biogenesis [J] | 2.00 |
| COG0525 | Valyl-tRNA synthetase | Translation, ribosomal structure and biogenesis [J] | 2.00 |
| COG1576 | 23S rRNA pseudoU1915 N3-methylase RlmH | Translation, ribosomal structure and biogenesis [J] | 1.00 |
| COG3201 | Nicotinamide riboside transporter PnuC | Coenzyme transport and metabolism [H] | 1.00 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 77.00 % |
| All Organisms | root | All Organisms | 23.00 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 22.00% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 10.00% |
| Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 6.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 4.00% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 3.00% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 3.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 3.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.00% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 3.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 3.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 3.00% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 2.00% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 2.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.00% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.00% |
| Biocrust | Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust | 2.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.00% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 2.00% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 1.00% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 1.00% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.00% |
| Sub-Biocrust Soil | Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 1.00% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 1.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 1.00% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 1.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 1.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 1.00% |
| Boreal Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil | 1.00% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
| 3300005169 | Soil and rhizosphere microbial communities from Laval, Canada - mgHPA | Environmental | Open in IMG/M |
| 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
| 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
| 3300005566 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 | Environmental | Open in IMG/M |
| 3300006032 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 | Environmental | Open in IMG/M |
| 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
| 3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
| 3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
| 3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
| 3300006914 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Host-Associated | Open in IMG/M |
| 3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
| 3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
| 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
| 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
| 3300009683 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG | Environmental | Open in IMG/M |
| 3300009789 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28 | Environmental | Open in IMG/M |
| 3300010036 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26 | Environmental | Open in IMG/M |
| 3300010040 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55 | Environmental | Open in IMG/M |
| 3300010041 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A | Environmental | Open in IMG/M |
| 3300010045 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61 | Environmental | Open in IMG/M |
| 3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
| 3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
| 3300010146 | Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010323 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG | Environmental | Open in IMG/M |
| 3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
| 3300010396 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2 | Environmental | Open in IMG/M |
| 3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
| 3300010877 | Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
| 3300012907 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1 | Environmental | Open in IMG/M |
| 3300012911 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2 | Environmental | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014488 | Bulk soil microbial communities from Mexico - San Felipe (SF) metaG | Environmental | Open in IMG/M |
| 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
| 3300015077 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2) | Environmental | Open in IMG/M |
| 3300015357 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG | Environmental | Open in IMG/M |
| 3300016445 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 | Environmental | Open in IMG/M |
| 3300018432 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T | Environmental | Open in IMG/M |
| 3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
| 3300019356 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2) | Environmental | Open in IMG/M |
| 3300019767 | Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T | Environmental | Open in IMG/M |
| 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300021404 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O | Environmental | Open in IMG/M |
| 3300021445 | Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG | Environmental | Open in IMG/M |
| 3300021474 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O | Environmental | Open in IMG/M |
| 3300021510 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex | Environmental | Open in IMG/M |
| 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300022756 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1 | Environmental | Open in IMG/M |
| 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028707 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148 | Environmental | Open in IMG/M |
| 3300028712 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139 | Environmental | Open in IMG/M |
| 3300028717 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158 | Environmental | Open in IMG/M |
| 3300028721 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355 | Environmental | Open in IMG/M |
| 3300028754 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157 | Environmental | Open in IMG/M |
| 3300028755 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356 | Environmental | Open in IMG/M |
| 3300028793 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159 | Environmental | Open in IMG/M |
| 3300028796 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141 | Environmental | Open in IMG/M |
| 3300028799 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123 | Environmental | Open in IMG/M |
| 3300028807 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186 | Environmental | Open in IMG/M |
| 3300028828 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202 | Environmental | Open in IMG/M |
| 3300028885 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185 | Environmental | Open in IMG/M |
| 3300030510 | Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2) | Environmental | Open in IMG/M |
| 3300031114 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
| 3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
| 3300031795 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19 | Environmental | Open in IMG/M |
| 3300031833 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178 | Environmental | Open in IMG/M |
| 3300031938 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1 | Environmental | Open in IMG/M |
| 3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
| 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Host-Associated | Open in IMG/M |
| 3300032080 | Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016 | Environmental | Open in IMG/M |
| 3300032828 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4 | Environmental | Open in IMG/M |
| 3300034029 | Biocrust microbial communities from Mojave Desert, California, United States - 47SNC | Environmental | Open in IMG/M |
| 3300034030 | Biocrust microbial communities from Mojave Desert, California, United States - 48SNC | Environmental | Open in IMG/M |
| 3300034377 | Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI10216J12902_1173863071 | 3300000956 | Soil | MTPRNWPKQFRAAASTFDRPALAQLAAEYATHLYA |
| Ga0066810_101339261 | 3300005169 | Soil | MTSPNWPKQFRAAASTFDWPALAQLAAEYATHLYAIPKPPDSVGQVLLVLRQS |
| Ga0070683_1002771941 | 3300005329 | Corn Rhizosphere | MTSRNWPKQFRAAASTFDWPALAQLAAEYAAHLYAIPKPPDSVGQVLLVLRQSRRYEELELVA |
| Ga0070660_1004409222 | 3300005339 | Corn Rhizosphere | MTSENWPKLFRAAASTFDRPALAQLAAEYAAHLYAIPKPPDSVGQV |
| Ga0070705_1008432783 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | MTSRNWPKQFRAAASTFDWPALAQLAAEYAAHLYAIPKPPDSVGQVLLVLRQS |
| Ga0066693_100311781 | 3300005566 | Soil | MTSRTWPKQFRAAASTFDWPALAQLAAEYATHLYAIPKPPDSVS |
| Ga0066696_100924623 | 3300006032 | Soil | MTSRTWPKQFRAAASTFDWPALAQLAAEYATHLYAIP |
| Ga0070716_1008083362 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MTSRTWPKQFRAAASTFDWPALAQLAAEYATHLYAIPKPPDSVGQVLLV |
| Ga0079220_106073221 | 3300006806 | Agricultural Soil | MTSRTWPKQFRAAASTFDWPALAQLAAEYATHLYTVPALPVSVGQVLQVLLVLRQSRRY |
| Ga0075434_1006745313 | 3300006871 | Populus Rhizosphere | MTSRNWPKQFRAAASTFDWPALAQLAAEYAAHLYA |
| Ga0075434_1007609291 | 3300006871 | Populus Rhizosphere | MTSRTWPKQFRAAASTFDWPALAQLAAEYAAHLYAIPKPPDSVGQVLLVLRQS |
| Ga0075424_1008748991 | 3300006904 | Populus Rhizosphere | MTSRTWPKQFRAAASTFDWPALAQLAAEYAAHLYAIPKPPDSVG |
| Ga0075436_1009309821 | 3300006914 | Populus Rhizosphere | VTSANWPKQFRTAASTFDWPALAQLAAEYATHLYAIP |
| Ga0075436_1011878701 | 3300006914 | Populus Rhizosphere | MTSRNWPKQFRAAASTFDWPALAQLAAEYATHLYAIP |
| Ga0075419_114869492 | 3300006969 | Populus Rhizosphere | VTSRNWPKQFRAAASTFDWPAMAQLAAEYAAHLYAIPKPPD |
| Ga0075435_1002145084 | 3300007076 | Populus Rhizosphere | MTSRNWPKQFRAAASTFDWPALAQLAAEYAAHLYAIPK |
| Ga0111539_132940701 | 3300009094 | Populus Rhizosphere | MTSPNWPKQFRAAASTFDWPALAQLAAEYATHLYAIPH |
| Ga0075418_112160213 | 3300009100 | Populus Rhizosphere | MTSPNWPKQFRAAASTFDWPALAQLAAEYATHLYAIPHPPDSV |
| Ga0075418_123299912 | 3300009100 | Populus Rhizosphere | MSPRNWPRQFRAAASTFDWPALAQLAAEYAIHLYAVPKLPDSVGQVLLVLRQSRRY |
| Ga0105243_126173902 | 3300009148 | Miscanthus Rhizosphere | MTSRNWPKQFRAAASTFDWPALAQLAAEYATHLYAIPKPPDSVGQVLLVLRQSRRYEELELVA |
| Ga0105241_106689841 | 3300009174 | Corn Rhizosphere | MTSANWPKQFRAAASTFDWPALAQLAAEYATHLYAIPKPPDSVGQVLL |
| Ga0105242_118057461 | 3300009176 | Miscanthus Rhizosphere | MTPRTWPKLFRAAASTFDRPALAQLAAEYAAHLYAIPKPPDSVGQVLLVLRQSRRYEELELVADAALA |
| Ga0105248_126448971 | 3300009177 | Switchgrass Rhizosphere | MTSRTWPKQFRAAASTFDWPALAQLAAEYATHLYAVPALPDSVGQVLL |
| Ga0105249_115190561 | 3300009553 | Switchgrass Rhizosphere | MTLPNWPKQFRAAASTFDWPALAQLAAEYASHLYAIPKPPDSVGQVL |
| Ga0116224_102638621 | 3300009683 | Peatlands Soil | MTSRTWPKQFRAAASTFDWPALAQLAAEYATHLYAVPTLPNSIGLVL |
| Ga0126307_107398683 | 3300009789 | Serpentine Soil | MTSRNWPKQFRAAASTFDQPALAQLAAEYATHLYTVPKLPDSVGQVLLILRQSRRYEELE |
| Ga0126307_111887821 | 3300009789 | Serpentine Soil | VSPRSWPREFRAAASTFDWPALAQLAAEYATHLYTVPKLPDSVGQV |
| Ga0126305_106145173 | 3300010036 | Serpentine Soil | MSPRSWPREFRAAASTFDQPALAQLAAEYATHLYTVPKLPDSVGQVLLILRQSRRYEELELV |
| Ga0126308_100751684 | 3300010040 | Serpentine Soil | MTSPNWPKQFRAAASTFNWPALAQLAAEYATHLYAIPKPPDS |
| Ga0126312_107946373 | 3300010041 | Serpentine Soil | MTSPNWPKQFRAAASTFDWPALAQLAAEYAIHLYAIPNPPDSVGQVLLVLRQS |
| Ga0126311_119018461 | 3300010045 | Serpentine Soil | VSPRSWPREFRAAASTFDWPALAQLAAEYATHLYTVPKLPDS |
| Ga0126384_103957181 | 3300010046 | Tropical Forest Soil | MTSRTWPKQFRAAASTFDWPALAQLAAEYATHLYAIPKLPDSVGQVLL |
| Ga0126382_102000243 | 3300010047 | Tropical Forest Soil | MTSRTWPKQFRAAASTFDWSALAQLAAEYATHLYAIPKPPDS |
| Ga0126320_11414072 | 3300010146 | Soil | MTPPNWPKQFRAAVSTFDWPALAQLAAEYATYLYTVPNLPDSVGQVLLALRQSQ |
| Ga0134086_104340931 | 3300010323 | Grasslands Soil | MTPPNWPKQFRAAVSTFDWPALAQLAAEYATHLYAIPKPPDSVGQVLLV |
| Ga0126381_1017666881 | 3300010376 | Tropical Forest Soil | MTSRTWPKQFRAAASTFDWPALAQLAAEYATHLYAIPKPPDSVGQVLLVLRQSRRYEELE |
| Ga0134126_107387503 | 3300010396 | Terrestrial Soil | MTSRTWPKQFRAAASTFDWPALAQLAAEYATHLYAVPALP |
| Ga0134126_114088732 | 3300010396 | Terrestrial Soil | MTSRTWPKQFRAAASTFDWPALAQLAAEYATHLYAIPK |
| Ga0134122_118534423 | 3300010400 | Terrestrial Soil | MTSRNWPKQFRAAASTFDWPALAQLAAEYAAHLYAIPKPPDSV |
| Ga0126356_107766171 | 3300010877 | Boreal Forest Soil | MTSQTWPKQFRAAASTFDWPALAQLAAEYATHLYAIPKPPDSVGQVL |
| Ga0150985_1038440031 | 3300012212 | Avena Fatua Rhizosphere | MTRQNWSKQFRAAASTFDRPALAQLAADYAAHLYTVALLPDSVGQVLLVLRQSRRYEELELVADAALA |
| Ga0150985_1108913783 | 3300012212 | Avena Fatua Rhizosphere | MTPQNWPKQFRTAVSTFDWPVLAQLAAEYATRLYAVPTLPDSVGQVLLVLRQSRRYEEL |
| Ga0150985_1220733562 | 3300012212 | Avena Fatua Rhizosphere | MTPPNWPKQFRAAVSRFDWPALAQLAAEYATHLYTVPNLPDSIGQ |
| Ga0150984_1012252841 | 3300012469 | Avena Fatua Rhizosphere | MTARNWPREFRAAASTFDSPALAQLAAEYATHLYAVPQLPGSVGQVLLTLRQSRRYEDLELVADAA |
| Ga0150984_1034356982 | 3300012469 | Avena Fatua Rhizosphere | MTRQNWSKQFRAAASTFDRPALAQLAADYAAHLYTVALLPDSVGQVLLVLRQSRRYK |
| Ga0157283_103319441 | 3300012907 | Soil | MTSPNWPKQFRAAASTFDWSALAQLAAEYANHLYAVPKLPNSVGQVL |
| Ga0157301_103409812 | 3300012911 | Soil | MTSPNWPKQFRAAASTFDWSALAQLAAEYATHLYAVPKLPDSVGQVLLVLRQSRRYKEL |
| Ga0157380_109460012 | 3300014326 | Switchgrass Rhizosphere | MSPRNWPRQFRAAASTFDWPALAQLAAEYAAHLYAIPNPPDSVGQVLLVLRQSRRYEEL |
| Ga0182001_105149361 | 3300014488 | Soil | MLMSPQNWPKQFRAAVSTFDWPAVAQLAAEYAAHLYAISELPNTVGLVLLV |
| Ga0157379_107522173 | 3300014968 | Switchgrass Rhizosphere | MTSRTWPKQFRAAASTFDWPALAQLAAEYAAHLYAVPALPDSVSQVLLVL |
| Ga0173483_103192761 | 3300015077 | Soil | MTSPNWPKQFRAAASTFDRPALAQLAAEYATHLYALPKLPDSVGQVLLVLRQSRRYEELELVADA |
| Ga0134072_102400931 | 3300015357 | Grasslands Soil | MTQANWPKQFRAAVSTFDWPAMAQLAAEYATHLYTVPNLPDSVGQVLLALRQSQRYEELELVADAALAH |
| Ga0182038_113197491 | 3300016445 | Soil | MTSRNWPKQFRADASTFDGPALAQLADEYATHLYAIPRPPDSVGQVLQV |
| Ga0190275_118929313 | 3300018432 | Soil | MTSPNWPKRFRAAASTFDRPALAQLAAEYAAHLYAIPTLPDSVGQVLLVLRQSRRYE |
| Ga0190270_114944413 | 3300018469 | Soil | MTSPNWPKQFRAAASTFDRPALAQLAAEYATYLYAVPKLPDSVG |
| Ga0173481_100249954 | 3300019356 | Soil | MTSPNWPKQFRAAASTFDRPALAQLAAEYATHLYALPKLPD |
| Ga0190267_106280722 | 3300019767 | Soil | MSPRSWPREFRAAASTFDWPALAQLAAEYATHLYAVPTLPGSIGQVLLVLRQSRRYK |
| Ga0206354_105823193 | 3300020081 | Corn, Switchgrass And Miscanthus Rhizosphere | MTSANWPKQFRAAASTFDWPALAQLAAEYAAHLYAIPKPPDSV |
| Ga0206354_115876964 | 3300020081 | Corn, Switchgrass And Miscanthus Rhizosphere | MTSRNWPKQFRAAASTFDWPALAQLAAEYAAHLYAIPKPPDSVGQVLLV |
| Ga0210389_106690581 | 3300021404 | Soil | MTSLTWPRQFRAAASTFDWPALAQLAAEYATHLYAVPTLPNSIGQVLLV |
| Ga0182009_103152531 | 3300021445 | Soil | MTSPNWPKQFRAAASTFDWPALAQLAAEYANHLYAVPKLPNSVGQ |
| Ga0210390_100811825 | 3300021474 | Soil | MTSLTWPRQFRAAASTFDWPALAQLAAEYATHLYAVPTLPNSIGQVLLVLRQ |
| Ga0222621_10842801 | 3300021510 | Groundwater Sediment | MTSPNWPKQFRAAASTFDWPALAQLAAEYANHLYAVPKLPNSVGQVL |
| Ga0224712_106352851 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | MTSENWPKLFRAAASTFDRPALAQLAAEYAAHLYAIPKPP |
| Ga0222622_104100052 | 3300022756 | Groundwater Sediment | MTSPNWPKQFRAAASTFDWPALAQLAAEYATHLYAIPKP |
| Ga0207692_106362201 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | MTSRTWPKQFRAAASTFDWPALAQLAAEYATHLYAVPTLPDSVGQVLLVLRQ |
| Ga0207709_102169632 | 3300025935 | Miscanthus Rhizosphere | MSPRNWPRQFRAAASTFDWPALAQLAAEYATHLYAIPKPPDSVGQVLLVLRQSRRYEELELVAD |
| Ga0207691_103308992 | 3300025940 | Miscanthus Rhizosphere | MSPRNWPRQFRAAASTFDWPALAQLAAEYAIHLYAVPKLPDSVGQ |
| Ga0207651_116899332 | 3300025960 | Switchgrass Rhizosphere | MTSRNWPKQFRAAASTFDWPALAQLAAEYATHLYAIPKPPDSVGQV |
| Ga0207712_102629772 | 3300025961 | Switchgrass Rhizosphere | MSPRNWPRQFRAAASTFDWPALAQLAAEYAIHLYAVPKLPDSVGQVLL |
| Ga0207668_108365871 | 3300025972 | Switchgrass Rhizosphere | MSPRNWPRQFRAAASTFDWPALAQLAAEYAIHLYAVPK |
| Ga0207641_107508421 | 3300026088 | Switchgrass Rhizosphere | MTSRTWPKQFRAAASTFDWPALAQLAAEYATHLYAIPKPPDSVGQVLLVLRQSRRYEE |
| Ga0207683_101787181 | 3300026121 | Miscanthus Rhizosphere | VTSRNWPKQFRAAASTFDWPALAQLAAEYAAHLYAIPKPPDSVGQVLLVLRQSRRYEE |
| Ga0307291_11032581 | 3300028707 | Soil | MTSPNWPKQFRAAASTFDWSALAQLAAEYATHLYAIPKPPDSVGQVLLVLRQSRRYEELELVA |
| Ga0307285_101242611 | 3300028712 | Soil | MSPRSWPREVRAAASTFDWPVLAQLAAEYATHLYAVPTLP |
| Ga0307298_100835461 | 3300028717 | Soil | MTSPNWPKQFRAAASTFDWSALAQLAAEYATHLYAIPKPPDSVGQVL |
| Ga0307315_102015572 | 3300028721 | Soil | MTRRNWPKQFRSAASTFDVPALKQLAAEYAAHLYAAPALPESVVHVLPVLRQSLRYE |
| Ga0307297_101688512 | 3300028754 | Soil | MTSPNWPKQFRAAASTFDWPALAQLAAEYANHLYAVPTLPNSV |
| Ga0307316_103786682 | 3300028755 | Soil | MTSPNWPKQFRAAASTFDWPALAQLAAEYANHLYAVPTLPN |
| Ga0307299_103672761 | 3300028793 | Soil | MTSPNWPKQFRAAASTFDWSALAQLAAEYATHLYAIPKPPDSVGQVLLVLRQSRR |
| Ga0307287_102454342 | 3300028796 | Soil | MTSPNWPKQFRAAASTFDWPALAQLAAEYATHLYAIPKPPDSVGQVLLVLRQSRRYEELELV |
| Ga0307284_100360484 | 3300028799 | Soil | MTSPNWPKQFRAAASTFDWPALAQLAAEYATHLYAVPTL |
| Ga0307305_104014372 | 3300028807 | Soil | MTSPNWPKQFRAAASTFDWPALAQLAAEYANHLYA |
| Ga0307312_104516232 | 3300028828 | Soil | MTSPNWPKQFRAAASTFDWSALAQLAAEYATHLYAIPKPPDSVGQVLLVLRQSR |
| Ga0307304_100518441 | 3300028885 | Soil | MTSPNWPKQFRAAASTFDWSALAQLAAEYATHLYAIPKPPDSV |
| Ga0268243_11278951 | 3300030510 | Soil | MTPRNWPRQFRAAASTFDWPTLAQLAAEYAAHLYTVPEFPGSVGQILLLLRQSRRYEELELIA |
| Ga0308187_101606221 | 3300031114 | Soil | MSPQNWPRQLRAAASTFDWPAVAQLAAEYATHLYAVPELPGNVGQVLLVLRQSRRYEELKLVA |
| Ga0308187_104600032 | 3300031114 | Soil | MTSPNWPKQFRAAASTFDWPVLAQLASEYASHLYAVSKL |
| Ga0307469_112581651 | 3300031720 | Hardwood Forest Soil | MTSRTWPKQFRAAASTFDWPALAQLAAEYATHLYA |
| Ga0307468_1002356192 | 3300031740 | Hardwood Forest Soil | MSPRSWPREFRAAASTFDWPTLAQLAAEYATHLYAVPTLPDSVG |
| Ga0318557_104384491 | 3300031795 | Soil | MTSRTWPKQFRAAASTFDWPTLAQLAAEYATHLYAIPK |
| Ga0310917_102442791 | 3300031833 | Soil | MTSRTWPKQFRAAASTFDWPALAQLAAEYATHLYAIPKPPDSVGQVLRVLRQSRRYEELELV |
| Ga0308175_1015380281 | 3300031938 | Soil | MTSPNWPKQFRAAASTFDWPALAQLAAEYATHLYAIPKPPDSVGQV |
| Ga0306922_104832162 | 3300032001 | Soil | MTSRTWPKQFRAAASTFDWPTLAQLAAEYATHLYAIPKPPDSVGQVLRVLRQSRRYEELE |
| Ga0307414_108535311 | 3300032004 | Rhizosphere | MTSPNWPKQFRAAASTFDWPALAQLAAEYATHLYAIPKPPDSVGQVLLILRQSRRYEELELV |
| Ga0326721_107069652 | 3300032080 | Soil | MTSPNWPKQFRAAASTFDWSALAQLAADYATHLYAIPTLPDNVAQVLLVLRQSRRYEELELVADAALAHGP |
| Ga0335080_101060735 | 3300032828 | Soil | VDGVRMTSRTWPKQFRAAASTFDWPALAQLAAEYATHLYAIPELPDSVGQVLL |
| Ga0334951_009205_2_118 | 3300034029 | Biocrust | MTRRNWPKEFRSAASTFDVPLLGQLATEYAAHLYAAPAL |
| Ga0334952_009309_2_118 | 3300034030 | Biocrust | MTRRNWPKEFRSAASTFDVPLLGRLATEYAAHLYAAPAL |
| Ga0334931_146835_3_200 | 3300034377 | Sub-Biocrust Soil | MTRRNWPKEFRSAASTFDVPLLGQLATEYAAHLYAAPALPDGVGQVLSILRQSLRYEELELVADAA |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |