NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F105722

Metagenome / Metatranscriptome Family F105722

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105722
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 88 residues
Representative Sequence MIRYAFLSRLGSVAYVAVTYDENGGNLPSKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAQLSTRTRAER
Number of Associated Samples 69
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 74.00 %
% of genes near scaffold ends (potentially truncated) 20.00 %
% of genes from short scaffolds (< 2000 bps) 91.00 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (96.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(37.000 % of family members)
Environment Ontology (ENVO) Unclassified
(55.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(68.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 10.43%    β-sheet: 17.39%    Coil/Unstructured: 72.17%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF02397Bac_transf 3.00
PF05532CsbD 3.00
PF04392ABC_sub_bind 2.00
PF13417GST_N_3 1.00
PF13545HTH_Crp_2 1.00
PF00118Cpn60_TCP1 1.00
PF00072Response_reg 1.00
PF11994DUF3489 1.00
PF01148CTP_transf_1 1.00
PF13817DDE_Tnp_IS66_C 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG2148Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)Cell wall/membrane/envelope biogenesis [M] 3.00
COG3237Uncharacterized conserved protein YjbJ, UPF0337 familyFunction unknown [S] 3.00
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 2.00
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.00 %
UnclassifiedrootN/A4.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001661|JGI12053J15887_10634327All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium508Open in IMG/M
3300002568|C688J35102_120966136All Organisms → cellular organisms → Bacteria3461Open in IMG/M
3300004479|Ga0062595_100863899All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium756Open in IMG/M
3300004479|Ga0062595_101403055All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium637Open in IMG/M
3300005167|Ga0066672_10510410All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium780Open in IMG/M
3300005175|Ga0066673_10338167All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium879Open in IMG/M
3300005175|Ga0066673_10412009All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium791Open in IMG/M
3300005175|Ga0066673_10527330All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium694Open in IMG/M
3300005177|Ga0066690_10070194All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2189Open in IMG/M
3300005179|Ga0066684_10049565All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2400Open in IMG/M
3300005180|Ga0066685_10087777All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales2062Open in IMG/M
3300005435|Ga0070714_100292828All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1515Open in IMG/M
3300005435|Ga0070714_100345479All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1396Open in IMG/M
3300005436|Ga0070713_100962550All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium822Open in IMG/M
3300005439|Ga0070711_101984449All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium512Open in IMG/M
3300005451|Ga0066681_10571471All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium698Open in IMG/M
3300005454|Ga0066687_10699753All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium603Open in IMG/M
3300005554|Ga0066661_10387447All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium856Open in IMG/M
3300005554|Ga0066661_10527501All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium710Open in IMG/M
3300005560|Ga0066670_10399878All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium842Open in IMG/M
3300005560|Ga0066670_10524798All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium726Open in IMG/M
3300005560|Ga0066670_10765766All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium585Open in IMG/M
3300005560|Ga0066670_10884041All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium543Open in IMG/M
3300005561|Ga0066699_10441916All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium931Open in IMG/M
3300005566|Ga0066693_10224190All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium739Open in IMG/M
3300005568|Ga0066703_10426658All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium796Open in IMG/M
3300005569|Ga0066705_10141161All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1472Open in IMG/M
3300005569|Ga0066705_10674491All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium626Open in IMG/M
3300005575|Ga0066702_10082384All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1803Open in IMG/M
3300005575|Ga0066702_10366931All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium876Open in IMG/M
3300005575|Ga0066702_10579750All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium675Open in IMG/M
3300005576|Ga0066708_10972102All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium528Open in IMG/M
3300005586|Ga0066691_10634510All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium634Open in IMG/M
3300005587|Ga0066654_10267397All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium906Open in IMG/M
3300005587|Ga0066654_10343296All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium810Open in IMG/M
3300005598|Ga0066706_10017631All Organisms → cellular organisms → Bacteria4223Open in IMG/M
3300005614|Ga0068856_100165975All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2219Open in IMG/M
3300006032|Ga0066696_10034848All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2724Open in IMG/M
3300006032|Ga0066696_10067759All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2059Open in IMG/M
3300006032|Ga0066696_10322374All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1006Open in IMG/M
3300006034|Ga0066656_10145996All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1476Open in IMG/M
3300006173|Ga0070716_101001517All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium661Open in IMG/M
3300006175|Ga0070712_100351977All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1206Open in IMG/M
3300006797|Ga0066659_10743833All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium805Open in IMG/M
3300006797|Ga0066659_11236141All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium623Open in IMG/M
3300006800|Ga0066660_11146926All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium613Open in IMG/M
3300006800|Ga0066660_11389170All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium550Open in IMG/M
3300006854|Ga0075425_100459884All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1465Open in IMG/M
3300007788|Ga0099795_10218814All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium810Open in IMG/M
3300009137|Ga0066709_103680919All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium556Open in IMG/M
3300009143|Ga0099792_10387337All Organisms → cellular organisms → Bacteria → Proteobacteria852Open in IMG/M
3300009143|Ga0099792_10799897All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium617Open in IMG/M
3300009840|Ga0126313_11216812All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium621Open in IMG/M
3300010038|Ga0126315_11222843All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium511Open in IMG/M
3300010040|Ga0126308_10418204Not Available896Open in IMG/M
3300010321|Ga0134067_10252830All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium665Open in IMG/M
3300010322|Ga0134084_10365092All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium554Open in IMG/M
3300010364|Ga0134066_10122320All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium784Open in IMG/M
3300010373|Ga0134128_11499955All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium742Open in IMG/M
3300012208|Ga0137376_10439261All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1133Open in IMG/M
3300012208|Ga0137376_11317334All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium612Open in IMG/M
3300012208|Ga0137376_11460645All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium575Open in IMG/M
3300012212|Ga0150985_105350923All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium980Open in IMG/M
3300012212|Ga0150985_109740954Not Available790Open in IMG/M
3300012285|Ga0137370_10262555All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1025Open in IMG/M
3300012469|Ga0150984_104501735Not Available607Open in IMG/M
3300012469|Ga0150984_119148200All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium616Open in IMG/M
3300012917|Ga0137395_10854145All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium659Open in IMG/M
3300012923|Ga0137359_11126485All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium671Open in IMG/M
3300012955|Ga0164298_10635967All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium738Open in IMG/M
3300012960|Ga0164301_10836076All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium708Open in IMG/M
3300012961|Ga0164302_10950574All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium665Open in IMG/M
3300012986|Ga0164304_11389165All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium576Open in IMG/M
3300012987|Ga0164307_11194941All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium630Open in IMG/M
3300014487|Ga0182000_10150018All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium843Open in IMG/M
3300018433|Ga0066667_10199131All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1470Open in IMG/M
3300018433|Ga0066667_10319837All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1217Open in IMG/M
3300018433|Ga0066667_10579503All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium934Open in IMG/M
3300018433|Ga0066667_11258086All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium645Open in IMG/M
3300018433|Ga0066667_11832855All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium550Open in IMG/M
3300018482|Ga0066669_10157053All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1682Open in IMG/M
3300018482|Ga0066669_10185229All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1575Open in IMG/M
3300018482|Ga0066669_10724105All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium877Open in IMG/M
3300018482|Ga0066669_11817283All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium564Open in IMG/M
3300018482|Ga0066669_12409913Not Available504Open in IMG/M
3300020006|Ga0193735_1058683All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1130Open in IMG/M
3300025915|Ga0207693_10335524All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1183Open in IMG/M
3300025915|Ga0207693_10506482All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium942Open in IMG/M
3300025929|Ga0207664_11764916All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium541Open in IMG/M
3300026312|Ga0209153_1229270All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium613Open in IMG/M
3300026316|Ga0209155_1131177All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium859Open in IMG/M
3300026547|Ga0209156_10263738All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium792Open in IMG/M
3300026550|Ga0209474_10065819All Organisms → cellular organisms → Bacteria2534Open in IMG/M
3300026550|Ga0209474_10676903All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium533Open in IMG/M
3300027903|Ga0209488_10424791All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium981Open in IMG/M
3300030829|Ga0308203_1096973All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium501Open in IMG/M
3300030991|Ga0073994_12396023All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium531Open in IMG/M
3300030993|Ga0308190_1116554All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium602Open in IMG/M
3300031058|Ga0308189_10371792All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium582Open in IMG/M
3300031716|Ga0310813_10326495All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1301Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil37.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil11.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil5.00%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil3.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil3.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.00%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere2.00%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300030829Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12053J15887_1063432713300001661Forest SoilMIRYAFLSRLGSVAYVAVTHDENGGNLPSKIDGNATRWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRPQLSTPTRAER*
C688J35102_12096613623300002568SoilMLVLASLMMTRPRYPFISRVGSVAYVAVTYHEAGENLPRSVDGNDASWTRIDAAEGAIFSLISTADMERDLHEVGLHITATRTKPRTSWASPGRPPAR*
Ga0062595_10086389913300004479SoilMIRYAFLSRLGSVAYVAVTYDENGCNLPSKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAHLSSPTGAER*
Ga0062595_10140305523300004479SoilSSGGYPTPDRSFRRFAMTRYAFISRLGSVAYVAVTYDENRSNLPIEIDGNKVEWSRIEASHGEVFLLVSNADMERDLHEAGIHITEIRTKPRAQFSTPIRAER*
Ga0066672_1051041013300005167SoilMARYAFISRLGSVAYVAVTYDKNGGNLPSNIDGNKVEWTRIQTSHGEVFSLLSNSDMERDLHEAQIHITETRTTRRSAYSTLGRSER*
Ga0066673_1033816723300005175SoilMIRYAFLSRLGSVAYVAVTHDENGGNLPSKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAQLSTRTRAER*
Ga0066673_1041200923300005175SoilMTRPRYPFISRVGSIAYVAVTYDEAGENLPRSVDGNDVTWTRIDAAGGAIFSLISTADMERDLHEVGLHIT
Ga0066673_1052733013300005175SoilMIRYAFLSRLGSVAYIAVTYDETGGNLPSEIDGNKVEWSRIEASHGEIFLLVSTTDMERDLNAARIHITETRTKPRTAFSTLGRSER*
Ga0066690_1007019413300005177SoilMINGSPEVAMARYAFISRLGSVAYVAVTYDKNGGNLPSNIDGNKVEWSRIQTSHGEVFSLLSNSDMERDLHEAQIHITETRTTRRSAYSTLGRSER*
Ga0066684_1004956523300005179SoilMIRYAFLSRLGSVAYVAVTHDENGGNLPSKIDGNETQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAQLSTRTRAER*
Ga0066685_1008777713300005180SoilMTRYAFLSRHGSVAYVGVTYDEKGNNLPEKIDGGPVKWTRIAAVQGEIFLLLSTADMERDLHEVGFHITETRTKPRSQGAHTDRSKKSIV*
Ga0070714_10029282833300005435Agricultural SoilMIRYAFLSRLGSVAYVAVTYDENGGNLPSKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAHLSSPTGAER*
Ga0070714_10034547923300005435Agricultural SoilMPRPSSGGYPTPDRSFRRFAMTRYAFISRLGSVAYVAVTYDENGSNLPIEIDGNKVEWSRIEASHGEVFLLVSTADMERDLHEAGIHITEIRTKPRAQFSTPIRAER*
Ga0070713_10096255013300005436Corn, Switchgrass And Miscanthus RhizosphereMIRYAFLSRLGSVAYVAVTYDENGGNLPSKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAHLSTPTGAER*
Ga0070711_10198444923300005439Corn, Switchgrass And Miscanthus RhizosphereMIRYAFLSRLGSVAYVAVTYDENGCNLPSKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAHLSTPTGAER*
Ga0066681_1057147123300005451SoilMTRYAFLSRLGAVAYVAVTYDENGGNLPSKIGGNKVEWNRIEASHGEVFSLISTTDMERDLHEAGIHITETRTKSRTEFSTPTGAEH*
Ga0066687_1069975313300005454SoilMIRYAFLSRLGSVAYVAVTHDENGGNLPSKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRA*
Ga0066661_1038744723300005554SoilMARYAFISRLGSVAYVAVTYDKNGGNLPSNIGGNKVEWSRIQTSHGEVFSLLSNSDMERDLHEAQIHITETRTTRRSAYSTLGRSER*
Ga0066661_1052750113300005554SoilMIRYAFLSRLGSVAYVAVTHDENGGNLPTKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHESGIHITETRTKPRAQLSTPARAER*
Ga0066670_1039987813300005560SoilVRVIQKSDGQPEIVMTRYAFLSRHGSVAYVGVTYDEKGNNLPEKIDGGPVKWTRIAAAQGEIFLLLSTADMERDLHEVGFHITETRTKPRSQGAHTDRSKKSIV*
Ga0066670_1052479813300005560SoilMTRYAFLSRLGSVAYVAVTYDENGGNLPREIDGNKVEWSRIEASHGEVFLLVSSADMERDLHEVGIHITETRTKPRAH
Ga0066670_1076576613300005560SoilMMTRTRYPFISRVGSIAYVAVTYDEAGENLPRSIDGNDVSWTRIDAAGGAIFSLISTADMERDLHEVGLHITETRTKP
Ga0066670_1088404113300005560SoilMTRYAFISRAGSVAYVAVTYDENGGNLPTNIDGNKVKWSRIEASHGAVFSLFSTSDMERDLHEARIHITETRTKPRTAFSTSDVQNARPTAAFSVTAVG*
Ga0066699_1044191613300005561SoilMTRCAFISRLGSIAYVAVTYDEHGGNLPSHIDGNRVEWSRVEASHGEVFSLLSTSDMERDLNEARIHITETRTKPRTAFSTLGRSER*
Ga0066693_1022419013300005566SoilMTRYAFFSRLGAVAYVAVTYDENGGNLPSKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAQLSTRTRAER*
Ga0066703_1042665823300005568SoilMIRYAFLSRLGSVAYVAVTHDENGGNLPSKIDGNETQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAQLSTRAER*
Ga0066705_1014116113300005569SoilMARYAFISRLGSVAYVAVTHDKHGGNLPSNIDGNKVEWSRIQTSHGEVFSLLSNSDMERDLHEAQIHITETRTTRRSAYSTLGRSER*
Ga0066705_1067449123300005569SoilMTRCAFLSRLGSVAYVAVTYDEKGGNLPREVDGNKVEWARIETSHGEIFSLVSTVDMERDLHESGIHITETRTKQRGTF*
Ga0066702_1008238453300005575SoilMTRCAFISRLGSIAYVAVTYDEHGGNLPSHIDGNRVEWSRVEASHGEVFSLLSTSDMERDLNEARIHITETRTKPRTAFSTLGHSER*
Ga0066702_1036693113300005575SoilAYIAVTYDKNGGNLPSNIDGNKVEWTRIQTSHGEVFSLLSTSDMERDLHEAQIHITETRTTRRSAYSTLGRSQR*
Ga0066702_1057975023300005575SoilMIRYAFLSRLGSVAYVAVTHDENGGNLPSKIDGNETQWSRIEGSHGEIFLLVPTADMERDLHEAGIHITETRTKPRAQLSTPIRAER*
Ga0066708_1097210213300005576SoilMMTRPRYPFISRVGSIAYVAVTYDEAGENLPRSIDGNDVTWTRIDAAGGAIFSLISTADMERDLHEVGLHITETRTKPRTSWAS
Ga0066691_1063451023300005586SoilMIRYAFLSRLGSVAYVAVTHDENGGNLPSKIDGNATQWSRIEGSYGEVFLLVSTADMERDLHEAGIHITETRTKPRAQLSTRTRAER*
Ga0066654_1026739723300005587SoilMIRYAFLSRLGSVAYVAVTYDENGGNLPSKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAQLSTRTRAER*
Ga0066654_1034329623300005587SoilMMTRPRYPFISRVGSIAYVAVTYDEAGENLPRSVDGNDVSWIPIEALEGAIFSLVSTADMERDLHEVGLHITDQNETANELG*
Ga0066706_1001763163300005598SoilMIRYAFLSRLGSVAYVAVTHDENGGNLPSKIDGNETQWCRIEASHVEVFLLVSTADMERDLHEAGIHITETRTKPRAQLSTRTRAER*
Ga0068856_10016597563300005614Corn RhizosphereFRRFAMTRYAFISRLGSVAYVAVTYDENRSNLPIEIDGNKVEWSRIEASHGEVFLLVSTADMERDLHEAGIHITEIRTKPRAQFSTPIRAER*
Ga0066696_1003484823300006032SoilMARYAFISRLGSVAYVAVTYDKNGGNLPSNIDGNKVEWSRIQTSHGEVFSLLSNSDMERDLHEAQIHITETRTTRRSAYSTLGRSER*
Ga0066696_1006775913300006032SoilMMTRPRYPFISRVGSIAYVAVTYDEAGENLPRSVDGNDVTWTRIDAAGGAIFSLISTADMERDLHEVGLHITETRTKPRTSWASRRR*
Ga0066696_1032237423300006032SoilMTRYAFISRAGSVAYVAVTYDETGGNLPTNIDGNKVKWSRIEASHGAVFSLFSTSDMERDLHEARIHITETRTKPRTAFSTSDVQNARPTAAFSATAVG*
Ga0066656_1014599623300006034SoilMLTTRPRYPFISRVGSVAYVAVTYDEAGENLPRSIDGNDVTWTRIEAPEGAIFSLVSTADMERDLHEVGLHITETRTKPRTSWASPGRQPARSA*
Ga0070716_10100151723300006173Corn, Switchgrass And Miscanthus RhizosphereMLRPSSGGYPTPDRSFRRFAMTRYAFISRLGSVAYVAVTYDENGSNLPIEIDGNKVEWSRIEASHGEVFLLVSTADMERDLHEAGIHITEIRTKPRAQFSTPIRAER*
Ga0070712_10035197723300006175Corn, Switchgrass And Miscanthus RhizosphereMIRYAFLSRLGSVAYVAVTYDENGGNLPSKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAHFSSPTGAER*
Ga0066659_1074383313300006797SoilMIRYAFLSRLGSVAYVAVTYDENGGNLPSKIDGNATQWSRIEGSYGEVFLLVSTADMERDLHEAGIHITETRTKPRAQLSTRTRAER*
Ga0066659_1123614123300006797SoilMARYAFISRLGSVAYLAVTYDKNGGNLPSNIDGNNVEWSRIQTSHGEVFSLLSTSDMERDLHEAQIHITETRTIPRSAYSTLGR*
Ga0066660_1114692623300006800SoilVLASLMMTRPRYPFISRVGSIAYVAVTYDEAGENQPRSVDGNDVTWTRIDAAGGAIFSLISTADMERDLHEVGLHITETRTKPRTSWASRRR*
Ga0066660_1138917013300006800SoilMARYAFISRLGSVAYVAVTYDKNGGNLPSNIDGNKVEWSRIQTSHGEVFSLLSTSDMERDLHEAQIHITETRTTPRSAYSTLGRSEG*
Ga0075425_10045988423300006854Populus RhizosphereMPRPSSGGYPTPDRSFRRFAMTRYAFISRLGSVAYVAVTYDENRSNLPIEIDGNKVEWSRIEASHGEVFLLVSTADMERDLHEAGIHITEIRTKPRAQFSTPIRAER*
Ga0099795_1021881413300007788Vadose Zone SoilMARYAFISRLGSVAYLAVTYDKNGGNLPSNIDGNKVEWSRIQTSHGEVFSLLSTSDMERDLHEAQIHITETRTTRRSAYSTLGRSER*
Ga0066709_10368091913300009137Grasslands SoilMRRYAFLSRLGSIAYVAVTYDASGGNLPSEIDGNKVEWSRIEALHGEIFLLVSTTDMERDLHEAGIHITETRTKQRDQFSTPTRAER*
Ga0099792_1038733733300009143Vadose Zone SoilMLVLASLMMTRPRYPFISRVGSVAYVAVTYHEAGENLPRSVDGNDASWTRIDAAEGAIFSLISTADMERDLHEVGLHIT
Ga0099792_1079989723300009143Vadose Zone SoilMARYAFISRLGSVAYLAVTYDKNGGNLPSNIDGNNVEWSRIQTSHGEVFSLLSTTDMERDLHEAQIHITETRTTRRSAYSTLGRS
Ga0126313_1121681213300009840Serpentine SoilMMTRPRYPFISRVGSIAYIAVTYDEAGENLPRSIDGNDVTWTRINAAGGAIFSLISTADMERDLHEVGLHITETRTKPRTSWASRHR*
Ga0126315_1122284313300010038Serpentine SoilMMTRPRYPFISRVGSVAYVAVTYDEAGENLPRSIDGNDVTWTRIEAPEGAIFSLISTADMERDLHEVGLHITETRTKPRTSWASRRR*
Ga0126308_1041820423300010040Serpentine SoilMMTRPRYPFISRVGSVAYVAVTYQEAGENLPRSIDGNDVTWTRIEAPEGAIFSLISTADMERDLHEVGLHITETRTKPRTSWASRRR*
Ga0134067_1025283023300010321Grasslands SoilMMTRPRYPFISRVGSVAYVAVTYDEAGENLPRSIDGNDVTWTRIDASGGAIFSLISTADMERDLHEVGLHITETRTKPRTSWASRRR*
Ga0134084_1036509223300010322Grasslands SoilMARYAFISRLGSVAYLAVTYDKNGGNLPSNIDGNNVEWSRIQTSHGEVFSLLSTSDMERDLHEAQIHITETRTTRRSAYSTLGRSQR*
Ga0134066_1012232023300010364Grasslands SoilMIRYAFVSRLGSVAYVAVTYDKNGGNLPSNIDGNKVEWSRIQTSHGEVFSLLSKSDMERDLHEAQIHITETRTTRRSAYSTLGRSQR*
Ga0134128_1149995513300010373Terrestrial SoilMIRYAFLSRLGSVAYVAVTYDENGGNLPSKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAHLSTPTVAER*
Ga0137376_1043926113300012208Vadose Zone SoilMARYAFISRLGSVAYLAVIYDKNGGNLPSNIDGNNVEWSRIQTSHGEVFSLLSTSDMERDLHEAQIHITETRTTRRSAYSTLGRSQR*
Ga0137376_1131733423300012208Vadose Zone SoilFLKASGSGASVMTRCAFLSRLGSVAYVAVTYDEKGGNLPREVDGNKVEWARIETSHGEIFSLVSTVDMERDLHEGGIHITETRTKQRGTF*
Ga0137376_1146064523300012208Vadose Zone SoilMTRYAFLSRHGSVAYVGVTYDKKGNNLPGKIDSGLVNWTRIAAAEGEIFLLLSTADMERDLHEAGFHITEIRTKPRSQIAHTG
Ga0150985_10535092323300012212Avena Fatua RhizosphereMMTRPRYPFISRVGSVAYVAVTYDEAGENLPRSIDGNDVTWTRIDASGGAIFSLISTADMERDLHEVGLHITETRTKPRTSWTSPGRQPTR*
Ga0150985_10974095423300012212Avena Fatua RhizosphereMTRPRYPFISRIGSIAYVAITYEEAGENLPRSVDGNDVSWTRIEEFEGAMFSLISTADMERDLHEVGVHITETRTKPRTSWAIRRA*
Ga0137370_1026255533300012285Vadose Zone SoilMINGSPEVAMARYAFISRLGSVAYLAVTYDKNGGNLPSNIDGNNVEWSRIQTSHGEVFSLLSTSDMERDLHEAQIHITETRTTRRSAYSTLGRSER*
Ga0150984_10450173523300012469Avena Fatua RhizosphereVGSIAYVAVTYDEAGENLPRSIDGNDVTWTRIDAAGGAIFSLISTADMERDLHEVGLHITETRTKPRTSWASPGRRPAR*
Ga0150984_11914820013300012469Avena Fatua RhizosphereLPSVRTFIDQRLPEVAMIRYAFLSRLGSVAYVAVTHDENGGNLPSKIDGNATRWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRPQLSPPTRAER*
Ga0137395_1085414513300012917Vadose Zone SoilMARYAFISRLGSVAYVAVTYDKNGGNLPSNIDGNKVEWSRIQTSHGEVFSLLSTSDMERDLHEAQIHITETRTTRRSAYSTLGRSER*
Ga0137359_1112648513300012923Vadose Zone SoilMSRSQSVAYVAVTYDESGGNLPSGIDGNDVKCTRFEAAHGEIFSLLYTPDMERDLHEAGVHITETRPKPRASRGRRSR*
Ga0164298_1063596713300012955SoilMVRYSFLSRRGSVAYVAVTHDENGGNLPTKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAQLSTPARAER*
Ga0164301_1083607623300012960SoilMTRYAFLSRLGSVAYVAVTYDENGSNLPSEIDGNKIEWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAQFSTPIRAER*
Ga0164302_1095057413300012961SoilMTRYAFISRLGSVAYVAVTYDENGSNLPGDIDGNKVEWSRIETSHGEVFLLVSTADMERDLNEAGIHITETRAKPRAQLSTPTRAER*
Ga0164304_1138916523300012986SoilMTRYAFISRLGSVAYVAVTHYENGGNLPTKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAQFSTPTRAQR*
Ga0164307_1119494123300012987SoilMTRYAFISRLGSVAYVAVTYDENGSNLPGDIDGNKVEWSRIETSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAQFSTPTRAER*
Ga0182000_1015001813300014487SoilMTRYAFLSRLGSVAYVAVTYDENGGNLPSEIDGNKVEWSRIEASHGEVFLLVSTADMERDLHEAGIHITETRTKRRPQISTSTRAR*
Ga0066667_1019913123300018433Grasslands SoilMTRYAFISRAGSVAYVAVTYDENGGNLPTNIDGNKVKWSRIEASHGAVFSLFSTSDMERDLHEARIHITETRTKPRTAFSTSDVQNARPTAAFSVTAVG
Ga0066667_1031983713300018433Grasslands SoilMIRYAFLSRLGSVAYVAVTHDENGGNLPSKIDGNETQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAQLSTRTRAER
Ga0066667_1057950333300018433Grasslands SoilMSRCAFLSRLGSVAYVAVTHDEKGGNLPSEIDGNKLEWASIEASHGEIFSLISTADMERDLHEGGIHITETRTKRRGTF
Ga0066667_1125808613300018433Grasslands SoilMMRCAFLARLGSVAYVAITYDEKGSNLPRKIDGNKVEWNRIEASHGEVFSLISTTDMERDLHEAGIHITETRTKSRTEFSTPTRAEH
Ga0066667_1183285513300018433Grasslands SoilMARYAFISRLGSVAYIAVTHDKNGGNLPSNIDANKVEWSRIQTSHGEVFSLLSTSDMERDLHEAQIHITETRTIPRSAYSTLGRSED
Ga0066669_1015705313300018482Grasslands SoilSGALPSVRTFIDQRLPEVAMIRYAFLSRLGSVAYVAVTHDENGGNLPSKIDGNETQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAQLSTRTRAER
Ga0066669_1018522933300018482Grasslands SoilVLASLMMTRPRYPFISRVGSIAYVAVTYDEAGENLPRSVDGNDVTWTRIDAAGGAIFSLISTADMERDLHEVGLHITETRTKPRTSWASRRR
Ga0066669_1072410523300018482Grasslands SoilMTRYAFLSRLGAVAYVAVTYDENGGNLPSKIGGNKIEWNRIEASHGEVFSLISTADMERDLHEAGIHITETRTKSRTEFSTPTGAEH
Ga0066669_1181728313300018482Grasslands SoilMMRCAFLARLGSVAYVAITYDEKGSNLPRKIDGNKVEWNRIEAAHGEIFSLVSSADMERDLHEGGIHVTETRTKRRGTF
Ga0066669_1240991313300018482Grasslands SoilMTRPRHPFISRVGSIAYVAVTYDEAGENLPLSIDGNDVTWTRIDASGGAIFSLISTADMERDLHEVGLHITETRTKPRTSWASRRR
Ga0193735_105868323300020006SoilMTRCAFLSRLGSVAYVAVTYDEKGGNLPREVDGNKVEWARIETSHGEIFSLVSTVDMERDLHEGGIHITETRTKQRGTF
Ga0207693_1033552413300025915Corn, Switchgrass And Miscanthus RhizosphereMPRPSSGGYPTPDRSFRRFAMTRYAFISRLGSVAYVAVTYDENGSNLPIEIDGNKVEWSRIEASHGEVFLLVSTADMERDLHEAGIHITEIRTKPRAQF
Ga0207693_1050648213300025915Corn, Switchgrass And Miscanthus RhizosphereMIRYAFLSRLGSVAYVAVTYDENGGNLPSKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAHFSS
Ga0207664_1176491623300025929Agricultural SoilMIRYAFLSRLGSVAYVAVTYDENGCNLPSKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAHLSTPT
Ga0209153_122927013300026312SoilMIRYAFVSRLGSVAYVAVTHDENGGNLPSKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAQLSTRTRAER
Ga0209155_113117723300026316SoilMARYAFISRLGSVAYVAVTHDENGGNLPSKIDGNETQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAQLSTRTRAER
Ga0209156_1026373813300026547SoilMARYAFISRLGSVAYVAVTYDKNGGNLPSNIDGNKVEWSRIQTSHGEVFSLLSKSDMERDLHEAQIHITETRTTRRSAYSTLGRSER
Ga0209474_1006581913300026550SoilFASLMMTRPRHPFISRVGSIAYVAVTYDEAGENLPLSIDGNDVTWTRIDASGGAIFSLISTADMERDLHEVGLHITETRTKPRTSWASRRR
Ga0209474_1067690313300026550SoilMTRYAFLSRLGSVAYVAVTYDENGGNLPREIDGNKVEWSRIEASHGEVFLLVSSADMERDLHEVGIHITETRTKPRAQFRTSDRAR
Ga0209488_1042479123300027903Vadose Zone SoilMARYAFISRLGSVAYLAVTYDKNGGNLPSNIDGNNVEWSRIQTSHGEVFSLLSTTDMERDLHEAQIHITETRTTRRSAYSTLGR
Ga0308203_109697313300030829SoilMTRCAFISRLGSVAYVAVTYDESGGNLPGEIDGNKVEWTRIETSQEVFSLLSTADMERDLHEVGIHITETRAKPRNGSGGALD
Ga0073994_1239602313300030991SoilMTRYAFLSKLGSVAYIAVTYDETGGNLPSEIDGNKVEWSRIEASHGEIFLLVSTTDMERDLHEAGIHITESRTKPRAQFSTPTRAER
Ga0308190_111655413300030993SoilMIRYPFLSRLGSVAYVAVTHDENGGNLPSKIDGNATQWSRIEGSHGEVFLLVSTADMERDLHEAGIHITETRTKPRAQLSTRTRAER
Ga0308189_1037179213300031058SoilFLSRLGSVAYVAVTYDEKGGNLPREVDGNKVEWARIEASHGEIFSLVSTVDMERDLHEGGIHITETRTKQRGTF
Ga0310813_1032649513300031716SoilSSGGYPTPDRSFRRFAMTRYAFISRLGSVAYVAVTYDENGSNLPIEIDGNKVEWSRIEASHGEVFLLVSTADMERDLHEAGIHITEIRTKPRAQFSTPIRAER

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.