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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F105721 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 100 |
| Average Sequence Length | 81 residues |
| Representative Sequence | MAAESAQRHKIDPLAEQAATLLAKAMVTSHDRELLWQEFRDLVVTHTKELEEAPVREALDEMERQGLSLDVVARVVHEKLGE |
| Number of Associated Samples | 78 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 81.63 % |
| % of genes near scaffold ends (potentially truncated) | 28.00 % |
| % of genes from short scaffolds (< 2000 bps) | 89.00 % |
| Associated GOLD sequencing projects | 71 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.35 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (68.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost (18.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (31.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (48.000 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
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| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 55.45% β-sheet: 0.00% Coil/Unstructured: 44.55% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.35 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF08031 | BBE | 6.00 |
| PF01904 | DUF72 | 3.00 |
| PF03734 | YkuD | 2.00 |
| PF13671 | AAA_33 | 1.00 |
| PF13668 | Ferritin_2 | 1.00 |
| PF05257 | CHAP | 1.00 |
| PF00011 | HSP20 | 1.00 |
| PF00196 | GerE | 1.00 |
| PF12587 | DUF3761 | 1.00 |
| PF13466 | STAS_2 | 1.00 |
| PF07238 | PilZ | 1.00 |
| PF03364 | Polyketide_cyc | 1.00 |
| PF08281 | Sigma70_r4_2 | 1.00 |
| PF02450 | LCAT | 1.00 |
| PF03176 | MMPL | 1.00 |
| PF03009 | GDPD | 1.00 |
| COG ID | Name | Functional Category | % Frequency in 100 Family Scaffolds |
|---|---|---|---|
| COG0277 | FAD/FMN-containing lactate dehydrogenase/glycolate oxidase | Energy production and conversion [C] | 6.00 |
| COG1801 | Sugar isomerase-related protein YecE, UPF0759/DUF72 family | General function prediction only [R] | 3.00 |
| COG1376 | Lipoprotein-anchoring transpeptidase ErfK/SrfK | Cell wall/membrane/envelope biogenesis [M] | 2.00 |
| COG3034 | Murein L,D-transpeptidase YafK | Cell wall/membrane/envelope biogenesis [M] | 2.00 |
| COG0071 | Small heat shock protein IbpA, HSP20 family | Posttranslational modification, protein turnover, chaperones [O] | 1.00 |
| COG0584 | Glycerophosphoryl diester phosphodiesterase | Lipid transport and metabolism [I] | 1.00 |
| COG1033 | Predicted exporter protein, RND superfamily | General function prediction only [R] | 1.00 |
| COG2409 | Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily | General function prediction only [R] | 1.00 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 68.00 % |
| All Organisms | root | All Organisms | 32.00 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Permafrost | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost | 18.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 9.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 8.00% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 6.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 6.00% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 4.00% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 4.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 4.00% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 3.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 3.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 3.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 3.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 2.00% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 2.00% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.00% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 2.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.00% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 2.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 2.00% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.00% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 1.00% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.00% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 1.00% |
| Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.00% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 1.00% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.00% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 1.00% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 1.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 1.00% |
| Visualization |
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2140918007 | Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all | Environmental | Open in IMG/M |
| 3300000878 | Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-5 cm-9A)- 1 week illumina | Environmental | Open in IMG/M |
| 3300000886 | Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-65cm-3A)- 1 week illumina | Environmental | Open in IMG/M |
| 3300001527 | Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-5cm-13A)- 1 week illumina | Environmental | Open in IMG/M |
| 3300001538 | Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina | Environmental | Open in IMG/M |
| 3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
| 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
| 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Environmental | Open in IMG/M |
| 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Environmental | Open in IMG/M |
| 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Environmental | Open in IMG/M |
| 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
| 3300005537 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 | Environmental | Open in IMG/M |
| 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
| 3300006031 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100 | Environmental | Open in IMG/M |
| 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
| 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
| 3300006755 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter | Environmental | Open in IMG/M |
| 3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
| 3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
| 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
| 3300010152 | Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
| 3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
| 3300010396 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2 | Environmental | Open in IMG/M |
| 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
| 3300011998 | Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M | Environmental | Open in IMG/M |
| 3300012004 | Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M | Environmental | Open in IMG/M |
| 3300012008 | Permafrost microbial communities from Nunavut, Canada - A39_80cm_12M | Environmental | Open in IMG/M |
| 3300012019 | Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M | Environmental | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012350 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG | Environmental | Open in IMG/M |
| 3300012356 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG | Environmental | Open in IMG/M |
| 3300012532 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG | Environmental | Open in IMG/M |
| 3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
| 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
| 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
| 3300013770 | Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M | Environmental | Open in IMG/M |
| 3300013832 | Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M | Environmental | Open in IMG/M |
| 3300014052 | Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M | Environmental | Open in IMG/M |
| 3300014056 | Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M | Environmental | Open in IMG/M |
| 3300014829 | Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M | Environmental | Open in IMG/M |
| 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300018027 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex | Environmental | Open in IMG/M |
| 3300018433 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116 | Environmental | Open in IMG/M |
| 3300019890 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1 | Environmental | Open in IMG/M |
| 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020077 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020080 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300021445 | Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG | Environmental | Open in IMG/M |
| 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300025625 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes) | Environmental | Open in IMG/M |
| 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027787 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes) | Environmental | Open in IMG/M |
| 3300028721 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355 | Environmental | Open in IMG/M |
| 3300028744 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367 | Environmental | Open in IMG/M |
| 3300028771 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369 | Environmental | Open in IMG/M |
| 3300028782 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193 | Environmental | Open in IMG/M |
| 3300028828 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202 | Environmental | Open in IMG/M |
| 3300031939 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2 | Environmental | Open in IMG/M |
| 3300032892 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| A_all_C_01924400 | 2140918007 | Soil | MAVQTAQRHAIDPLAEQAATLLAKAMVTSHDREDLWQHFHDLVVAQAKELEEAPIREALDEMERQGLSLDVVARVVHEKLSE |
| AL9A1W_10381312 | 3300000878 | Permafrost | MAVETPQRHAIDPLAEQAATLLAKAMVTSHDREDLWQQFHGLVLQQAKDLEEAPVREALGELERQGLSLDVIARVVHEKLGD* |
| AL3A1W_11507801 | 3300000886 | Permafrost | MAVETPQRRAIDPLAEQAATLLAKAMVTSHDREELWQHFRDLVLAQAKELEEAPVREALGELERQGLSLDVIARVVHEQLGD* |
| A3513AW1_10118281 | 3300001527 | Permafrost | MAVETPQRRAIDPLAEQAATLLAKAMVTSHDREELWQHFRDLVLAQAKELEEAPVREALGELERQGPVSYTHLTLPTKR |
| A10PFW1_111502061 | 3300001538 | Permafrost | MAVEDAQRHKIDPLAEQAATFLAKAMVTSHDRDLLWQQFRDVVVAHTKELEEAPVREALDEMERQGLSLDVVARVVHEKLGE* |
| C688J35102_1197757342 | 3300002568 | Soil | QQAIDPLAQQAATLLAKAMVTSHNRDLLWQRFHELVVATAAELEEAPVRDAIEEIERRGLSLDVVARVVQQRLSE* |
| C688J35102_1207514022 | 3300002568 | Soil | VAIDKAERHAIDPLAEQAATLLAKAMVTSHDRDELWQAFRDRVVQQAKALEEAPVREALEEMERRGLSLDVVARVVHEKLGD* |
| Ga0062590_1025850532 | 3300004157 | Soil | MAVQNAARHNIDPLAEQAATLLAKAMVTSHDRDDLWQQFRDVVVAQTKELEEAPVRDALEDMERRGLSLDVVARVIHEKLAE* |
| Ga0062595_1001039241 | 3300004479 | Soil | MAVQNAAGHSIDPLAEQAATLLAKAMVTSHDRERLWQQFRDVVVAQTKELEEAPVRDALEDMERRGLSLDVVARVVHEKLAE* |
| Ga0062595_1001170883 | 3300004479 | Soil | MAVEREQRHKIDPLAEQAATLLAKAMMTSHDRELLWQEFRDLVVTHTKELEEAPVREALDEMERQGLSLDVVARVVHEKLGE* |
| Ga0062595_1024090472 | 3300004479 | Soil | MAVQNAARHNIDPLAEQAATLLAKAMVTSHDRDDLWQQFRDVVVAQTKELEEAPVRDALEDMERRGLSLDVVARVIHEKL |
| Ga0062594_1004251832 | 3300005093 | Soil | MAVEREQRHKIDPLAEQAATLLAKAMMTSHDRDLLWQEFRDLVVTHTKELEEAPVREALDEMERQGLSLDVVARVVHEKLGK* |
| Ga0062594_1029141172 | 3300005093 | Soil | QAATLLAKAMVTSHDRDLLWQRFHELVVATAAELEEAPVRDAIDEIERRGLPLDVVARVVQQRLGE* |
| Ga0068868_1001282142 | 3300005338 | Miscanthus Rhizosphere | MTPANAPQQPIDPLAQQAATLLAKAMVTSHDRDLLWQRFHELVVATAAELEEAPVRDAIDEIERRGLPLDVVARVVQQRLGE* |
| Ga0070671_1007612202 | 3300005355 | Switchgrass Rhizosphere | MTPANAPQRPIDPLAQQAATLLAKAMVTSHDRDLLWQRFHELVVATAAELEEAPVRDAIDEIERRGLPLDVVARVVQQRLAE* |
| Ga0070709_102285281 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | MTPANAPQQPIDPLAQQAATLLAKAMVTSHDRDLLWQRFHELVVATAAELEEAPVRDAIDEIERRGLRLDVVARVVQQRLGE* |
| Ga0070714_1020683062 | 3300005435 | Agricultural Soil | KPPHQPIDPLAQQAATLLAKAMVTSHDRDLLWQRFHELVAATAAELEEGPVRDAIDEIERRGLRLDVVARVVQQRLGE* |
| Ga0070710_109059051 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MTPANPPHQPIDPLAQQAATLLAKAMVTSHDRDLLWQRFHELVAATAAELEEGPVRDAIDEIERRGLRLDVVARVVQQRLGE* |
| Ga0070710_111138061 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | RHKIDPLAEQAATLLAKAMVTGHDRELLWQEFRDLVVANTKELEEAPVREALDEMERQGLSLDVVARVVHEKLGE* |
| Ga0070710_112574931 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MTVEDAQRHKIDPLAEQAATLVAKAMVTSHDRELLWQEFRDLVLAKTKELEEAPVRQALDEMERQGLS |
| Ga0070684_1000079636 | 3300005535 | Corn Rhizosphere | MAVESEQRHKIDPLAEQAATLLAKAMMTSHDRDLLWQEFRDLVVTHTKELEEAPVREALDEMERQGLSLDVVARVVHEKLGK* |
| Ga0070730_107088532 | 3300005537 | Surface Soil | VRATNAPEQALDPLAQQAATLLAKAMVTSHDRDLLWQRFHELVVATAAELEEAPVRDAIDEIERRGLSLDVVARVVQQRLSE* |
| Ga0068856_1001157363 | 3300005614 | Corn Rhizosphere | VAIDKAERHAIDPLAEQAATLLAKAMVTSHDRDELWQDFRDRVVQQAKALEEAPVREALEEMERRGLSLDVVARVVHEKLGD* |
| Ga0066651_101047014 | 3300006031 | Soil | MAAQNAAGHTIDPLAEQAATLLAKAMVTSHDRDLLWQQFRDVVVAHTKDLEEAPVRDALEDLERRGLSLDVVARVIHEKLAE* |
| Ga0070716_1010415101 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MPVEQATKPQSLDPLAEQAANLLAKAMVTSHEREQLWHRFRDLVDATTTELEEAPVRVAVDDLERRGLSLDVVARVVHERLSE* |
| Ga0070716_1013114672 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MAVENAARRTIDPLAEQAATLLAKAMVTSHDRELLWQQFRDLVVAHTKEFEEAPVRDALEEMERRGLSLDVVARVIHEKLAD* |
| Ga0097621_1022281271 | 3300006237 | Miscanthus Rhizosphere | PLAEQAVGLLAKAMVTSHDRDALWERFQDRVVEQTKELEEAPIREALDEMERQGLRLEAVARVVRDRLGG* |
| Ga0079222_102676391 | 3300006755 | Agricultural Soil | MAVDNAQLHGIDPLAGQAATLLAKAMVTSDDREALWHEFRELVEGQTKEIEEAPVREALDDMVRRGVQLDVVARVVHERLGG* |
| Ga0079222_112206692 | 3300006755 | Agricultural Soil | MMAVTNTPQPAIDPLAQQAATLLAKAMVTSHDRELLWQRFHELVVATAAELEEAPVREAIDEIERRGLSLDVVARVVQQRLGE* |
| Ga0079220_109139492 | 3300006806 | Agricultural Soil | MAAESAQRHKIDPLAEQAATLLAKAMVTSHDRDLLWQEFRDLVVTHTKELEEAPVREALDEMERQGLSLDVVARVVHEKLGD* |
| Ga0075425_1018797521 | 3300006854 | Populus Rhizosphere | MAVDTVPRAAIDPLAGQAATLLSKAMVTTENRDVLWQQFRELVEEQTKEIEEAPVREALDELVRRGVELGVVARVVHERLGD* |
| Ga0068865_1007713571 | 3300006881 | Miscanthus Rhizosphere | MAVDNAQERAIDPLAEQAVGLLAKAMVTSHDRDALWERFQDRVVEQTKELEEAPIREALDEMER |
| Ga0105245_103979813 | 3300009098 | Miscanthus Rhizosphere | MAVEREQRHKIDPLAEQAATLLAKAMMTSHDRDLLWQEFRDLVVTHTKELEEAPVREALDEMERQGLSLDVVARVVHEKLGD* |
| Ga0105241_114009122 | 3300009174 | Corn Rhizosphere | MTPANAPQQPIDPLAQQAATLLAKAMVTSHDRDLLWQRFHELVVATAAELEEAPVRDAIDEIERRGLPLDVVARVVQQRLAE* |
| Ga0105242_117303822 | 3300009176 | Miscanthus Rhizosphere | MTVEDAQRHKIDPLAEQAATLVAKAMVTSHDRELLWQEFRDLVLAKTKELEEAPVRQALDEMERQGLSLDVVARVVH |
| Ga0126318_104574631 | 3300010152 | Soil | MAVQNTAGSVIDPLAEQAATLLAKAMVSSHDRELLWQQFRDVVVAYTKELEEAPVRDALEDLERRGLSLEVVARVIHDRLGE* |
| Ga0134125_104196492 | 3300010371 | Terrestrial Soil | MAAESAQRHKIDPLAEQAATLLAKAMVTSHDRELLWQEFRDLVVTHTKELEEAPVREALDEMERQGLSLDVVARVVHEKLGE* |
| Ga0134125_105461972 | 3300010371 | Terrestrial Soil | MMAVTNAPQSAIDPLAQQAATLLAKAMVTSHDRELLWQRFRELVVATAAELEEAPVREAIDEIERRGLSLDVVARVVQQRLGE* |
| Ga0134128_107586562 | 3300010373 | Terrestrial Soil | MMATNAPQQAIDPLAQQAATLLAKAMVTSQDRELLWRRFHELVVATTAELEEAPVRDAVDEIERRGLSLDVVARVVQQRLSE* |
| Ga0134126_106756131 | 3300010396 | Terrestrial Soil | MAVQSEQRHKIDPLAEQAATLLAKAMMTSHDRDLLWQEFRDLVVTHTKELEEAPVREALDEMERQGLSLDVVARVVHEKLGE* |
| Ga0105246_119742381 | 3300011119 | Miscanthus Rhizosphere | MAVESEQRHKIDPLAEQAATLLAKAMMTSHDRDLLWQEFRDLVVTHTKELEEAPVREALDEMERQGLSLDVVARVVHEKLGE* |
| Ga0120114_10418112 | 3300011998 | Permafrost | MAVDTAKRHALDPLAEQAATLLAKAMVTSHDRENLWQQFHDLVIAQAKELEEGPVREALGEMERRGLSLDVIARVVHEKLGD* |
| Ga0120134_10097752 | 3300012004 | Permafrost | MAVDTAKRHALDPLAEQAATLLAKAMVTSHDRENLWQQFHDLVIAQAKELEEAPVREALGEMERRGLSLDVIARVVHEKLGD* |
| Ga0120174_10642111 | 3300012008 | Permafrost | MAVETPQRHAIDPLAEQAATLLAKAMVTSHDRENLWQQFHDLVIAQAKELEEGPVREALGEMERRGLSLDVIARVVHEKLGDWTPPAAPTARCCG* |
| Ga0120139_10356041 | 3300012019 | Permafrost | MMAVTNAPQQAVDPRVQQAASLLAKAMVTSRDRDLLWQRFYELVVGTAAELEEAPVRDAVDEIERRGLSLDVVARVVQERLAD* |
| Ga0150985_1092190171 | 3300012212 | Avena Fatua Rhizosphere | AMTATNAPQQAIDPLAEQAATLLAKAMVTSRNRDLLWQRFYELVVATATELEEAPVRDAIEEIERRGLSLDVVARVVQQRLSE* |
| Ga0150985_1125404752 | 3300012212 | Avena Fatua Rhizosphere | QQAVRRSAVAIDKAERHAIDPLAEQAATLLAKAMVTSHDRDELWQAFRDRVVQQAKALEEAPVREALEEMERRGLSLDVVARVVHEKLGD* |
| Ga0137372_110677151 | 3300012350 | Vadose Zone Soil | MAVENAQKHAIDPLAQQAAGLLAKAMVTSHDRDGLWERFHALVVDQTKELEEAPIREALDEMERQGLRLDVVAR |
| Ga0137371_102065813 | 3300012356 | Vadose Zone Soil | MAVEDAHRHKIDPLAEQAATFLAKAMVTSHDRDLLWQQFRDLVVAHTKELEEAPVREALDEMERQGLSLDIVARVVHEKLGD* |
| Ga0137373_102925101 | 3300012532 | Vadose Zone Soil | GGQIMAVDNAHKHAIDPLAQQAAGLLAKAMVTSHDRDGLWERFHALVVDQTKELEEAPIREALDEMERKGLRLDVVARVVHDRLGD* |
| Ga0164298_108434152 | 3300012955 | Soil | MAVEREQRHKIDPLAEQAATLLAKAMMTSHDRELLWQEFRDLVVTQTKELEEAPVREALDEMERQGLSLDVVARVVHEKLGE* |
| Ga0157374_104694032 | 3300013296 | Miscanthus Rhizosphere | MAVEREQRHKIDPLAEQAATLLAKAMMTSHDRDLLWQEFRDLVVTHTKELEEAPVREALDEMERQGLSLDVVARVVHEKLGE* |
| Ga0157372_103978761 | 3300013307 | Corn Rhizosphere | MAVQNAAGHSIDPLAEQAATLLAKAMVTSHDRERLWQQFRDVVVAQTKELEEAPVRDALEDMERRGLSLDVVARV |
| Ga0157372_114413283 | 3300013307 | Corn Rhizosphere | MAVQHAASHSIDPLAEQAATLLAKAMVTSHDRDLLWQQFRDVVVAQTKELEEAPVRDALEDMERRGLSLDVVARVIHEKLGE* |
| Ga0120123_10273451 | 3300013770 | Permafrost | MAVTSAPQQAVDPLVQQAASLLAKAMVTSRDRDLLWQRFYELVVGTAAELEEAPVRDAVDEIERRGLSLDVVARVVQERLAD* |
| Ga0120132_10057572 | 3300013832 | Permafrost | MMAVPNAPQEAVDPLVQQAATLLAKAMVTSRDRDLLWQRFYELVVGTAAELEEAPVRDAVDEIERRGLSLDVVARVVQQRLTE* |
| Ga0120132_10127511 | 3300013832 | Permafrost | MAVETPQRHAIDPLAEQAATLLAKAMVTSHDREDLWQQFHGLVLQQAKDLEEAPVREALGELERQGLSLDVIARVVHEQLGD* |
| Ga0120132_10320553 | 3300013832 | Permafrost | MAVETPQRRAIDPLAEQAATLLAKAMVTSHDREELWQHFRDLVLAQAKELEEAPVREALGELERQGLSLD |
| Ga0120109_10077323 | 3300014052 | Permafrost | MMAVTNAPQQAVDPLVQQAASLLAKAMVTSQDRDLLWQRVYELVVGTAAELEEAPVRDAVDEIERRGLSLDVVARVVQERLAD* |
| Ga0120109_10359331 | 3300014052 | Permafrost | VEISSILKDRRVGDEAPLAVTSAPEGATDPLVEQAAVLLAKAMVTSRDRDLVWERFRELVGRAFAELEEAPARDAVDEMERRGLSLDVVARVVQQRLGE* |
| Ga0120125_10151352 | 3300014056 | Permafrost | MMAVTNAPQQAVDPRVQQAASLLAKAMVTSQDRDLLWQRVYELVVGTAAELEEAPVRDAVDEIERRGLSLDVVARVVQQRLTE* |
| Ga0120104_10383853 | 3300014829 | Permafrost | LAVTSAPEGATDPLVEQAAVLLAKAMVTSRDRDLVWERFRELVGRAFAELEEAPARDAVDEMERRGLSLDVVARVVQQRLGE* |
| Ga0120104_10417781 | 3300014829 | Permafrost | MAVDTAKRHALDPLAEQAATLLAKAMVTSHDRENLWQQFHDLVIAQAKELEEAPVREALGEMERRGLSLDVIARV |
| Ga0120104_10773721 | 3300014829 | Permafrost | MMAVTNAPQQAVDPLVQQAASLLAKAMVTSRDRDLLWQRFYELVVGTAAELEEAPVRDAVDEIERRGLSLDVVARVVQQRLAE* |
| Ga0157376_118247712 | 3300014969 | Miscanthus Rhizosphere | MAVDNAQERAIDPLAEQAVGLLAKAMVTSHDRDALWERFHERVVEQTKELEEAPIREALDEMERQGLRLEAVARVVRD |
| Ga0157376_130961191 | 3300014969 | Miscanthus Rhizosphere | PQQPIDPLAQQAATLLAKAMVTSHDRDLLWQRFHELVVATAAELEEAPVRDAIDEIERRGLPLDVVARVVQQRLGE* |
| Ga0132258_121341444 | 3300015371 | Arabidopsis Rhizosphere | DRRSDMAVENVQRHAIDPIAEQAATLLAKLMVTSHDRDLLWQEFRDRVVEQTKELEEAPVREALDEMERRGLSLDVVARVVHEKLGD* |
| Ga0132256_1033796331 | 3300015372 | Arabidopsis Rhizosphere | DPIAEQAATLLAKLMVTSHDRDLLWQEFRDRVVEQTKELEEAPVREALDEMERRGLSLDVVARVVHEKLGD* |
| Ga0132255_1047779871 | 3300015374 | Arabidopsis Rhizosphere | RRSDMAVENVQRHAIDPIAEQAATLLAKLMVTSHDRDLLWQEFRDRVVEQTKELEEAPGREALDEMERRGLSLDVVARVVHEKLGD* |
| Ga0184605_103977132 | 3300018027 | Groundwater Sediment | MAVDNAQERAIDPLAEQAVGLLAKAMVTSHDRDALWERFHDRVVEQTKELEEAPIREALDEMERQGLRLEAVARVVRDRLGG |
| Ga0066667_106660922 | 3300018433 | Grasslands Soil | MAAQNAAGHTIDPLAEQAATLLAKAMVTSHDRDLLWQQFRDVVVAHTKDLEEAPVRDALEDLERRGLSLDVVARVIHEKLAE |
| Ga0193728_12506952 | 3300019890 | Soil | MAVEDARRHKIDPLAEQAATLLAKAMVTGHDRELLWQEFRDLVVAHTKELEEAPVREALDEMERQGLSLDVVARVVHEKLGE |
| Ga0193728_13269192 | 3300019890 | Soil | MAVETPQRHAIDPLAEQAATLLAKAMVTSHDREDLWQQFHGLVLQQAKDLEEAPVREALGELERQGLSLDVIARVVHEKLGD |
| Ga0206356_105708011 | 3300020070 | Corn, Switchgrass And Miscanthus Rhizosphere | TPMAVQNAAGHSIDPLAEQAATLLAKAMVTSHDRERLWQQFRDVVVAQTKELEEAPVRDALEDMERRGLSLDVVARVVHEKLAE |
| Ga0206351_105835874 | 3300020077 | Corn, Switchgrass And Miscanthus Rhizosphere | MATNAPQQAIDPLAQQAATLLAKAMVTSQDRELLWRRFHELVVATTAELEEAPVRDAVDEIERRGLSLDVVARVVQQRLSE |
| Ga0206350_100002583 | 3300020080 | Corn, Switchgrass And Miscanthus Rhizosphere | MMATNAPQQAIDPLAQQAATLLAKAMVTSQDRELLWRRFHELVVATTAELEEAPVRDAVDEIERRGLSLDVVARVVQQRLSE |
| Ga0206350_103346701 | 3300020080 | Corn, Switchgrass And Miscanthus Rhizosphere | GSVGPIPRFPERTSGMAVESEQRHKIDPLAEQAATLLAKAMMTSHDRDLLWQEFRDLVVTHTKELEEAPVREALDEMERQGLSLDVVARVVHEKLGK |
| Ga0182009_105421652 | 3300021445 | Soil | MAVQHAASHSIDPLAEQAATLLAKAMVTSHDRDLLWQQFRDVVVAQTKELEEAPVRDALEDMERRGLSLDVVARVIHEKLGE |
| Ga0224712_100131851 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | MAVESEQRHKIDPLAEQAATLLAKAMMTSHDRDLLWQEFRDLVVTHTKELEEAPVREALDEMERQGLSLDVVARVVHEKLGK |
| Ga0224712_103173791 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | MAVQNATGRSIDPLAEQAATLLAKAMVTSHDRDLLWQQFRDVVVAQTKELEEAPVRDALEDMERRGLSLDVVARVVHEKLAE |
| Ga0208219_10624342 | 3300025625 | Arctic Peat Soil | MAVTNATHATDPLVEQAAMLLAKAMVTSRDRELLWERFRELVVGTAAELEEAPVRAAVDEMERQGWKLDVVARVVQQRL |
| Ga0207692_104908602 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | MAVEKAERHAIDPLAEQAVTLLAKAMVTCHERDHLWQEFRDRVVEQTKALEEAPVREALEEMERRGLSLDVVARVVHEKLGE |
| Ga0207692_109910952 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | MTVEDAQRHKIDPLAEQAATLLAKAMVTGHDRELLWQEFRDLVVANTKELEEAPVREALDEMERQ |
| Ga0207642_103395212 | 3300025899 | Miscanthus Rhizosphere | MAVDNAQERAIDPLAEQAVGLLAKAMVTSHDRDALWERFQDRVVEQTKELEEAPIREALDEMERQGLRLEAVARVVRDRLGG |
| Ga0207654_112251052 | 3300025911 | Corn Rhizosphere | VAIDKAERHAIDPLAEQAATLLAKAMVTSHDRDELWQDFRDRVVQQAKALEEAPVREALEEMERRGLSLDVVARVVHEKLGD |
| Ga0207707_101063111 | 3300025912 | Corn Rhizosphere | MAVEREQRHKIDPLAEQAATLLAKAMMTSHDRELLWQEFRDLVVTHTKELEEAPVREALDEMERQGLSLDVVARVVHEKLGE |
| Ga0207671_106217802 | 3300025914 | Corn Rhizosphere | MAVQNAAGHSIDPLAEQAATLLAKAMVTSHDRERLWQQFRDVVVAQTKELEEAPVRDALEDMERRGLSLDVVARVVHEKLAE |
| Ga0207694_114872051 | 3300025924 | Corn Rhizosphere | MTPANAPQQPIDPLAQQAATLLAKAMVTSHDRDLLWQRFHELVVATAAELEEAPVRDAIDEIERRGLPLDVVARVVQQRLGE |
| Ga0207664_111708342 | 3300025929 | Agricultural Soil | MTPANPPHQPIDPLAQQAATLLAKAMVTSHDRDLLWQRFHELVAATAAELEEGPVRDAIDEIERRGLRLDVVARVVQQRLGE |
| Ga0207644_110169841 | 3300025931 | Switchgrass Rhizosphere | MTPANAPQRPIDPLAQQAATLLAKAMVTSHDRDLLWQRFHELVVATAAELEEAPVRDAIDEIERRGLPLDVVARVVQQRLAE |
| Ga0207665_108588281 | 3300025939 | Corn, Switchgrass And Miscanthus Rhizosphere | MAVENAARRTIDPLAEQAATLLAKAMVTSHDRELLWQQFRDLVVAHTKEFEEAPVRDALEEMERRGLSLDVVARVIHEKLAD |
| Ga0209074_100512733 | 3300027787 | Agricultural Soil | MAVQNAAGHSIDPLAEQAATLLAKAMVTSHDRERLWQQFRDVVVAQTKELEEAPVRDALEDMERRG |
| Ga0307315_101819821 | 3300028721 | Soil | MAVDNVQERAIDPLAEQAVGLLAKAMVTSHDRDALWERFHDLVVAQTKELEEAPIREALDEMERQGLRLEAVARVVRDRLGG |
| Ga0307318_101824732 | 3300028744 | Soil | MAVDNAQERAIDPLAEQAVGLLAKAMVTSHDRDALWERFHDLVVAQTKELEEAPIREALDEMERQGLRLEAVARVVRDRLGG |
| Ga0307320_100212503 | 3300028771 | Soil | MAVDNAQERAIDPLAEQAVGLLAKAMVTSHDRDALWERFHDLVVTQTKELEEAPIREALDEMERQGLRLEAVARVVRDRLGG |
| Ga0307306_101282872 | 3300028782 | Soil | MPVEQATKPQSLDPLAEQAAGLLAKAMVTSHERERLWQRFRDLVDATTTELEEAPVREAVDDLERRGLRLDVVARVVHERLSE |
| Ga0307312_101489562 | 3300028828 | Soil | MAVDNAERHAIDPLAEQAVTLLAKAMVTSHDRDELWQQVRDRVVQQTKALEEAPVREALEDMERRGLSLDVVARVVHEKLGD |
| Ga0308174_102566672 | 3300031939 | Soil | MMAVTNAPQSAIDPLAQQAATLLAKAMVTSHDRELLWQRFRELVVATAAELEEAPVREAIDEIERRGLSLDVVARVVQQRLGE |
| Ga0308174_116459181 | 3300031939 | Soil | VQNATGRSIDPLAEQAATLLAKAMVTSHDRDLLWQQFRDVVVAQTKELEEAPVRDALEDMERRGLSLDVVARVVHEKLAE |
| Ga0335081_101713472 | 3300032892 | Soil | MPVEQATKPKSLDPLAEQAVTLLAKAMVTSHDRELLWERFRDLVDAMTTELEEAPVREALADLERRGLSLDVLARVVHERLAE |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |