NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F105708

Metagenome Family F105708

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105708
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 65 residues
Representative Sequence ARQAQTLTNQVAQAGNPAVIAKEAEQLGMRPNPHLGFVDLKTGKIVVGKPSRAEAAINVPGYTP
Number of Associated Samples 90
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 90.00 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (58.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa
(16.000 % of family members)
Environment Ontology (ENVO) Unclassified
(18.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 28.26%    β-sheet: 6.52%    Coil/Unstructured: 65.22%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF03717PBP_dimer 34.00
PF08245Mur_ligase_M 3.00
PF01225Mur_ligase 1.00
PF01206TusA 1.00
PF09995MPAB_Lcp_cat 1.00
PF12706Lactamase_B_2 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0768Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2)Cell cycle control, cell division, chromosome partitioning [D] 34.00
COG0425Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis)Translation, ribosomal structure and biogenesis [J] 1.00
COG0769UDP-N-acetylmuramyl tripeptide synthaseCell wall/membrane/envelope biogenesis [M] 1.00
COG0770UDP-N-acetylmuramyl pentapeptide synthaseCell wall/membrane/envelope biogenesis [M] 1.00
COG0773UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl familyCell wall/membrane/envelope biogenesis [M] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A58.00 %
All OrganismsrootAll Organisms42.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001356|JGI12269J14319_10026857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3932Open in IMG/M
3300004092|Ga0062389_100971153All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1034Open in IMG/M
3300004152|Ga0062386_101565215All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales550Open in IMG/M
3300004152|Ga0062386_101581519All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales547Open in IMG/M
3300005437|Ga0070710_11070086All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia591Open in IMG/M
3300005440|Ga0070705_101276824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia608Open in IMG/M
3300005445|Ga0070708_102191196All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Thermobifida → Thermobifida cellulosilytica510Open in IMG/M
3300005450|Ga0066682_10959780All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia506Open in IMG/M
3300005534|Ga0070735_10511104All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia715Open in IMG/M
3300005602|Ga0070762_10131069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1483Open in IMG/M
3300005841|Ga0068863_100325100All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1494Open in IMG/M
3300006052|Ga0075029_100916428All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia602Open in IMG/M
3300006173|Ga0070716_101272019All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales593Open in IMG/M
3300006175|Ga0070712_100350137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae1209Open in IMG/M
3300006175|Ga0070712_100515942All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1003Open in IMG/M
3300006176|Ga0070765_101416076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia655Open in IMG/M
3300006755|Ga0079222_12187977All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia549Open in IMG/M
3300006797|Ga0066659_10044222All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2771Open in IMG/M
3300006804|Ga0079221_10034246All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2177Open in IMG/M
3300006854|Ga0075425_103155617All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Cutibacterium502Open in IMG/M
3300009090|Ga0099827_11282484Not Available637Open in IMG/M
3300009098|Ga0105245_12546399Not Available565Open in IMG/M
3300009162|Ga0075423_11098541Not Available847Open in IMG/M
3300009545|Ga0105237_10356406All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1467Open in IMG/M
3300009698|Ga0116216_10878923Not Available536Open in IMG/M
3300009824|Ga0116219_10498594All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia673Open in IMG/M
3300010325|Ga0134064_10398323Not Available549Open in IMG/M
3300010337|Ga0134062_10713955Not Available528Open in IMG/M
3300010379|Ga0136449_100621276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1835Open in IMG/M
3300010379|Ga0136449_102967453Not Available664Open in IMG/M
3300010379|Ga0136449_103626849Not Available585Open in IMG/M
3300012201|Ga0137365_11094687Not Available574Open in IMG/M
3300012353|Ga0137367_10621999Not Available755Open in IMG/M
3300012685|Ga0137397_11128032All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia569Open in IMG/M
3300012929|Ga0137404_11860303Not Available560Open in IMG/M
3300012986|Ga0164304_10312547Not Available1082Open in IMG/M
3300013308|Ga0157375_10061561All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3727Open in IMG/M
3300014166|Ga0134079_10445975Not Available612Open in IMG/M
3300014326|Ga0157380_12107168Not Available627Open in IMG/M
3300016319|Ga0182033_11552624Not Available598Open in IMG/M
3300016341|Ga0182035_10961674Not Available755Open in IMG/M
3300017822|Ga0187802_10098850Not Available1097Open in IMG/M
3300017822|Ga0187802_10355991Not Available575Open in IMG/M
3300017933|Ga0187801_10498750Not Available513Open in IMG/M
3300017935|Ga0187848_10415303Not Available553Open in IMG/M
3300017946|Ga0187879_10189090Not Available1157Open in IMG/M
3300017970|Ga0187783_10056456All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2894Open in IMG/M
3300017975|Ga0187782_11352435Not Available559Open in IMG/M
3300018001|Ga0187815_10442625Not Available555Open in IMG/M
3300018044|Ga0187890_10263748Not Available969Open in IMG/M
3300018085|Ga0187772_10972453Not Available619Open in IMG/M
3300018468|Ga0066662_12849419Not Available513Open in IMG/M
3300021171|Ga0210405_10376381Not Available1119Open in IMG/M
3300021178|Ga0210408_10527900Not Available937Open in IMG/M
3300021402|Ga0210385_11277622Not Available563Open in IMG/M
3300021405|Ga0210387_10601578Not Available977Open in IMG/M
3300021432|Ga0210384_11873301Not Available505Open in IMG/M
3300025914|Ga0207671_11473564Not Available526Open in IMG/M
3300025915|Ga0207693_10996200Not Available640Open in IMG/M
3300025916|Ga0207663_11051474All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae654Open in IMG/M
3300025922|Ga0207646_10537904All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1051Open in IMG/M
3300025927|Ga0207687_10824938Not Available792Open in IMG/M
3300025939|Ga0207665_10248112Not Available1314Open in IMG/M
3300026095|Ga0207676_10917737Not Available860Open in IMG/M
3300026118|Ga0207675_100009982All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales8892Open in IMG/M
3300027783|Ga0209448_10236679Not Available604Open in IMG/M
3300027812|Ga0209656_10097151Not Available1553Open in IMG/M
3300027875|Ga0209283_10619880Not Available684Open in IMG/M
3300027905|Ga0209415_10297198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1396Open in IMG/M
3300028742|Ga0302220_10180560Not Available793Open in IMG/M
3300028747|Ga0302219_10140300Not Available924Open in IMG/M
3300028792|Ga0307504_10441868Not Available520Open in IMG/M
3300028801|Ga0302226_10065472All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1682Open in IMG/M
3300028879|Ga0302229_10086723All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1496Open in IMG/M
3300028906|Ga0308309_10646508All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae918Open in IMG/M
3300029951|Ga0311371_10950834Not Available1030Open in IMG/M
3300029999|Ga0311339_11437751All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Thermobifida → Thermobifida fusca617Open in IMG/M
3300030056|Ga0302181_10164218Not Available1051Open in IMG/M
3300030399|Ga0311353_10464680Not Available1127Open in IMG/M
3300030399|Ga0311353_10609507Not Available953Open in IMG/M
3300030490|Ga0302184_10034124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae2600Open in IMG/M
3300030524|Ga0311357_10912513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales780Open in IMG/M
3300030617|Ga0311356_10087380All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales3284Open in IMG/M
3300031028|Ga0302180_10087991All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1796Open in IMG/M
3300031028|Ga0302180_10518330Not Available582Open in IMG/M
3300031198|Ga0307500_10177424Not Available624Open in IMG/M
3300031231|Ga0170824_123142220All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1623Open in IMG/M
3300031234|Ga0302325_12029193Not Available708Open in IMG/M
3300031525|Ga0302326_12253785Not Available693Open in IMG/M
3300031708|Ga0310686_101366792All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae918Open in IMG/M
3300031708|Ga0310686_108410159Not Available599Open in IMG/M
3300031708|Ga0310686_108412441Not Available838Open in IMG/M
3300031718|Ga0307474_10381957All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1094Open in IMG/M
3300031718|Ga0307474_11221350Not Available594Open in IMG/M
3300031719|Ga0306917_10609246Not Available859Open in IMG/M
3300032060|Ga0318505_10374638Not Available673Open in IMG/M
3300032160|Ga0311301_10355117Not Available2288Open in IMG/M
3300032261|Ga0306920_101440421Not Available986Open in IMG/M
3300032892|Ga0335081_10029103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales8886Open in IMG/M
3300034199|Ga0370514_109814Not Available705Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa16.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere10.00%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil8.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.00%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil5.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland3.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.00%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.00%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.00%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300028742Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3EnvironmentalOpen in IMG/M
3300028747Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028801Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3EnvironmentalOpen in IMG/M
3300028879Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030056Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3EnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030490Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3EnvironmentalOpen in IMG/M
3300030524II_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300031028Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300034199Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12269J14319_1002685743300001356Peatlands SoilNLQEQNANLARQEQTLTNEIAQAGNPAVIAAEAKQLGMRPNPYLGFIDLKTGKIVTGKPSSAEAAINVPGYTP*
Ga0062389_10097115313300004092Bog Forest SoilSLSKQEQLLSQQVAQDAAPAQIAEEAEELGMRPNPNLQFINVKTGKVVTGHPTAAQQEIDVPGYTP*
Ga0062386_10156521523300004152Bog Forest SoilNANLARQEQTLTNQVAQAGSPAVIASEARQLGMRPNPRLGFIDLKTGKIVTGKPSRAEAAINVPGYTP*
Ga0062386_10158151923300004152Bog Forest SoilNANLARQEQTLTNQVAQAGNPAVIAQKAQQLGMRPNPRLGFIDLKTGKIVTGKPSRAEAAINVPGYTP*
Ga0070710_1107008613300005437Corn, Switchgrass And Miscanthus RhizosphereQVAQAENPAVIAQKAEQLGMRPNPHLGFIDLKTGKIVTGKPSGADAAINVPGYNP*
Ga0070705_10127682413300005440Corn, Switchgrass And Miscanthus RhizosphereQNAELARQAQTLTNQVAQAGNPAVIAQEAKRLGMRPNPHLGFVDLKTGKIVVGKPSRAEAAINVSGYNP*
Ga0070708_10219119613300005445Corn, Switchgrass And Miscanthus RhizosphereLQEQNAELARQAQILTNQVAQAGNPAVIAKEARQLGMRPNPHLGFVDLKSGKIVVGKPSRAEAAINVPGYTP*
Ga0066682_1095978023300005450SoilRQAQTLTNQVAQAGNPAVIAREAQQLGMRPNPHLGFVDLKTGKIVVGKPSRAEAAINVPGYTP*
Ga0070735_1051110423300005534Surface SoilESTLTQQVAQASAPAQIAQEAEEFGMRPNPALQFINLKTGKVVKGKVSKADAEINVPGYNP*
Ga0070762_1013106923300005602SoilITSLQQQNANLTRQEQTLNNAVAQASNPAVIAQEAEQFGMRQDPNLSFIDLKTGNIVSGKVSKSDAEINVPGYTP*
Ga0068863_10032510013300005841Switchgrass RhizosphereRQAQILTNQVAQAGNPAVIAKEARQLGMRPNPHLGFVDLKSGKIIVGKPSRAEAAINVPGYTP*
Ga0075029_10091642813300006052WatershedsNEVAQAGNPAVVAKEARQLGMRPNPHLGFIDLKTGKIVTGKPSSAEAAINVPGYTP*
Ga0070716_10127201913300006173Corn, Switchgrass And Miscanthus RhizosphereLQEQNAELARQAQTLTNQVAQAGNPAVIAKEARQLGMRPNPHLGFIDVKSGKIVVGKPSRAEAAINVPGYTP*
Ga0070712_10035013713300006175Corn, Switchgrass And Miscanthus RhizosphereEQQTLTNEVAQAGNPAVIAQKAEQLGMRANPHLGFIDPKTGKIIVGKPSRAEAAINVPGYTP*
Ga0070712_10051594213300006175Corn, Switchgrass And Miscanthus RhizosphereLARQAQTLTNQVAQAGNPAVIAKEARQLGMRPNPHLGFIDLKSGKIVVGKPSRAEAAINVPGYTP*
Ga0070765_10141607613300006176SoilQQVLTEAVAQAQSPAQIAQEAAGLGMRQDPYLRFINLKTGKIVTGKVPKSDAEINVPGYTP*
Ga0079222_1218797723300006755Agricultural SoilAQTLTNQVAQAGNPAVIAKEAEQLGMRPNPHLGFVDLKTGKIVVGKPSRAEAAINVPGYTP*
Ga0066659_1004422213300006797SoilTNQVAQAGNPAVIAKEAEQLGMRPNPHLGFVDLKTGKIVVGKPSKAEAAINVPGYTP*
Ga0079221_1003424613300006804Agricultural SoilLTNQVAQAGNPAVIAKEARQLGMRPNPHLGFVDLKSGKIVVGKPSRAEAAINVPGYTP*
Ga0075425_10315561713300006854Populus RhizosphereARQAQTLTNQVAQAGNPAVIAKEAEQLGMRPNPHLGFVDLKTGKIVVGKPSRAEAAINVPGYTP*
Ga0099827_1128248423300009090Vadose Zone SoilFRITNLQEQNANLARQEQTLTNEVAQAGNPAVIAQEAEQLGMRPNPNLGFIDLKTGKIVVGKPSRAEAAINVPGFNP*
Ga0105245_1254639913300009098Miscanthus RhizosphereLQEQNAELARQAQILTNQVAQAGNPAVIAKEARQLGMRPNPHLGFIDLKSGKIVVGKPSRAEAAINVPGYTP*
Ga0075423_1109854123300009162Populus RhizosphereARQAQTLTNQVAQAGNPAVIAKEAEQLGMRPNPHLGFVDLKSGKIVVGKPSRAEAAINVPGYTP*
Ga0105237_1035640613300009545Corn RhizosphereARQAQILTNQVAQAGNPAVIAKEARQLGMRPNPHLGFVDLKSGKIVVGKPSRAEAAINVPGYTP*
Ga0116216_1087892313300009698Peatlands SoilITNLQQQNADLARQEQTLTNQVARAADPAVIATEAEQLGMRPNPRLGFIDLKTGKIVTGKPSRAEAAINVPGYTP*
Ga0116219_1049859413300009824Peatlands SoilLQQQNANLARQEQTLTNQVAQAGNPAVIAQEAEQLGMRPNPRLGFIDLKTGKIVTGKPSRDEAAINVPGYTP*
Ga0134064_1039832313300010325Grasslands SoilAELARQAQTLTNQVAQAGNPAVIAKEAEQLGMRPNPHLGFVDLKTGKIVVGKPSKAEAAINVPGYTP*
Ga0134062_1071395513300010337Grasslands SoilDLARPAQTLTNRVAQAGSPAMIAKEAELLGMRPNPHLGFIDLKSGKIVVGKPSRAEAAINVPGYNP*
Ga0136449_10062127623300010379Peatlands SoilFRITNLQEQNANLARQEQTLTNEVAQAGNPAVIAAEAEQLGMRPNPHLGFIDLKTGKIVTGKPSRAEAAINVPGYTP*
Ga0136449_10296745313300010379Peatlands SoilQEQNANLARQEQTLTNEVAQAGSPAVIAAEAKQLGMRPNPYLGFLDLKTGKIVTGKPSSAEAAINVPGYTP*
Ga0136449_10362684923300010379Peatlands SoilVAQAGSPAVIAAEAKQLGLRPNPYLGFIDLKTGKIVTGKPSSAEAAINVPGYTP*
Ga0137365_1109468713300012201Vadose Zone SoilQTLTNQVAQAGNPAVIAKEAEQLGMRPNPHLGFVDLKSGKIVVGKPSRAQAAINVPGYNP
Ga0137367_1062199913300012353Vadose Zone SoilAQGSFRITSLQQQNAELARQAQTLTNQVAQAGNPAVIAKEAEQLGMRPNPHLGFVDLKSGKIVVGKPSRAQAAINVPGYNP*
Ga0137397_1112803223300012685Vadose Zone SoilVAQAGNPAVIAKEAEQLGMRPNPHLGFVDLKTGKIVVGKPSRAEAAINVPGYTP*
Ga0137404_1186030313300012929Vadose Zone SoilEQNAELARQAQTLTNQVAQAGNPAVIAKEAEQLGMRPNPHLGFVDLKTGKIVVGKPSRAEAAINVPGYTP*
Ga0164304_1031254713300012986SoilQAQTLTNQVAQAGNPAVIAQEAEQLGMRPNPHLGFVNLKTGKIVVGKPSRAEAAINVPGYNP*
Ga0157375_1006156113300013308Miscanthus RhizosphereTLTNQVAQAGNPAVIAKEARSLGMRPNPHLGFIDLKSGKIVVGKPSRAEAAINVPGYTP*
Ga0134079_1044597513300014166Grasslands SoilRQAQTLTNQVAQAGNPAVIAKEAEELGMRPNPHLGFVDLKTGKIVVGKPSRAEAAINVPGYNP*
Ga0157380_1210716823300014326Switchgrass RhizosphereQEQNAELARQAQILTNQVAQAGNPAVIAKEARQLGMRPNPHLGFVDLKSGKIVVGKPSRAEAAINVPGYTP*
Ga0182033_1155262423300016319SoilQQVAQASSPAQIAQEAEQLGMRPNPQLQFIDTKTGKVVKGQVSKADAEIHVPGYTP
Ga0182035_1096167413300016341SoilTQQVAQASSPTQIAQEAEQFGMRPNPHLQFINLKTGKVIKGQVSKADAEINVPGYTP
Ga0187802_1009885013300017822Freshwater SedimentTQQVAQASSPAQIAQEAEQFGMQPDPVLQFIDLKTGKIVSGKVSRADAEINVPGYNP
Ga0187802_1035599113300017822Freshwater SedimentQEQLLSQQVAQASSPAQIAQESEAFGMRPNPNLQFINLKSGKIVTGHPSQADSEINVPGYTP
Ga0187801_1049875013300017933Freshwater SedimentEQVLSQQVAQASSPAQIASEAEQFGMQQNPNLRFINLKTGKIIQGKISSADAALNAPGYT
Ga0187848_1041530313300017935PeatlandLNNAVAQAANPAVIAKEAEQFGMRQDPNLSFIDLKTGKIVSGKISKSDAEIDVPGYTP
Ga0187879_1018909023300017946PeatlandNLTRQEQALNNAVAQAANPAVIAQEAEQFGMRQDPNLSFIDLKTGKIVSGKVSKSDAEINVPGYTP
Ga0187783_1005645613300017970Tropical PeatlandLARQEQLLSQQVAQASSPAQIASEAEQFGMQQNPNLRFINLKTGKIIAGKVSTADAELSAPGYTP
Ga0187782_1135243513300017975Tropical PeatlandLARQEQLLSQQVAQASSPAQIASEAEQFGMQQNPNLRFINLKTGKIIEGKVSKADAALNAPGYTP
Ga0187815_1044262513300018001Freshwater SedimentQEQVLSQQVAQASSPAQIAREAEQFGMTQNPSLRFIDLKTGKIVAGKVSKADAAINVPGYSP
Ga0187890_1026374813300018044PeatlandNPAVIAKEAQRLGMRQNPDLRFIDLKNGKIVTGKVSESDAEIHVPGYNP
Ga0187772_1097245313300018085Tropical PeatlandQTLSNQVAQASNPALIAREAEQLGMQPNPRLGFIDPKTGKIIVGKPSRAEAAINVPGYTP
Ga0066662_1284941913300018468Grasslands SoilQAGQRAVRGLDPEQLGGRPTPHLGLVDLKTGKSVVGKPSRAEAAINVPGYTP
Ga0210405_1037638123300021171SoilLQEQNAELARQAQTLTNQVAQAGNPAVIAREAQQLGMRPNPHLGFIDLKTGKIVVGKPSRAEAAINVPGYTP
Ga0210408_1052790013300021178SoilAELARQAQTLTNQVAQAGNPAVIAREAQQLGMRPNPHLGFIDLKTGKIVVGKPSRAEAAINVPGYTP
Ga0210385_1127762213300021402SoilNLQEQNANLARQEQTLSNEVAQAGNPAVIAQQAKQLGMRPNPLLGFIDLKTGKIVTGKPSGAEAAINVPGYNP
Ga0210387_1060157813300021405SoilKVAQASSPAQIAQEAEEFGMRPNPALQFINLKTGKVVKGKVSKADAEINVPGYNP
Ga0210384_1187330113300021432SoilARQAQTLTNQVAQAGNPAVIAKEAEQLGMRPNPHLGFVDLKTGKIVVGKPSKAETAINVPGYTP
Ga0207671_1147356413300025914Corn RhizosphereLARQAQILTNQVAQAGNPAVIAKEARQLGMRPNPHLGFIDLKSGKIVVGKPSRAEAAINVPGYTP
Ga0207693_1099620013300025915Corn, Switchgrass And Miscanthus RhizosphereLQEQNANLAREQQTLTNEVAQAGNPAVIASKAERLGMRPNPHLGFIDPKTGKIIVGKPSRAEAAINVPGFTP
Ga0207663_1105147423300025916Corn, Switchgrass And Miscanthus RhizosphereTLTNQVAQAGNPAVIAQEAEQLGMRPNPHLGFVDLKTGKIVVGKPSKAEAAINVPGYTP
Ga0207646_1053790423300025922Corn, Switchgrass And Miscanthus RhizosphereVAQAGNPAVIAHEAEQLGMRPNPHLGFVNLKTGKIVVGKPSRAEAAINVPGYTP
Ga0207687_1082493823300025927Miscanthus RhizosphereQNAELARQAQILTNQVAQAGNPAVIAKEARQLGMRPNPHLGFIDLKSGKIVVGKPSRAEAAINVPGYTP
Ga0207665_1024811223300025939Corn, Switchgrass And Miscanthus RhizosphereSLAREKQILTNQVAQAENPAVIAQKAEQLGMRPNPHLGFIDLKTGKIVTGKPSGADAAINVPGYNP
Ga0207676_1091773713300026095Switchgrass RhizosphereEQNANLAREQQTLTNEVAQAANPAVIASKAEQLGMRPNPHLGFIDQKTGKIIVGKPSRAEAAINVPGYTP
Ga0207675_10000998293300026118Switchgrass RhizosphereILTNQVAQAGNPAVIAKEARQLGMRPNPHLGFIDLKSGKIVVGKPSRAEAAINVPGYTP
Ga0209448_1023667913300027783Bog Forest SoilNANLAKQESTLTQQVAQASSPAQIAQEAEGFGMRPNPALQFINLKTGKVVKGQVSKADAEINVPGYNP
Ga0209656_1009715113300027812Bog Forest SoilGAFRITNLQEQNANLARQEQTLTNQVAQAGSPAVIASEARQLGMRPNPRLGFIDLKTGKIVTGKPSRAEAAINVPGYTP
Ga0209283_1061988023300027875Vadose Zone SoilNLVRQEQTLTNEVAQAGNPAVIAQEAEQLGMRPNPNLGFIDLKTGKIVVGKPSRAEAAINVPGFNP
Ga0209415_1029719813300027905Peatlands SoilQQNANLARQEQTLTNQVAQAGNPAVIAQEAEQLGMRPNPRLGFIDLKTGKIVTGKPSRAEAAINVPGYTP
Ga0302220_1018056013300028742PalsaQQQNANLTRQEQTLNSAVAQAANPAVIAQEAEQFGMRQDPNLSFIDTRTGKIVSGKVSKSDAEINVPGYTP
Ga0302219_1014030013300028747PalsaSAVAQAANPAVIAQEAEQFGMRQDPNLSFIDTRTGKIVSGKVSKSDAEINVPGYTP
Ga0307504_1044186813300028792SoilRQAQTLTNQVAQAGNPAVIAKEAEQLGMRPNPHLGFVDLKTGKIVVGKPSKAEAAINVPGYTP
Ga0302226_1006547213300028801PalsaGAFQITSLQQQNANLTRQEQTLNNAVAQAANPAVIAQAAEQFGMRQDPNLSFIDLKTGKIVSGKVSKSDAEINVPGYTP
Ga0302229_1008672323300028879PalsaITSLQQQNANLTRQEQTLNNAVAQAANPAVIAQEAKQFGMRQDPNLSFIDTKTGKIVSGKVSKSDAEINVPGYTP
Ga0308309_1064650813300028906SoilNLQEQNANLARQEQTLSNEVAQAGNPAVIAQQAKQLGMRPNPLLGFIDLKTGKIVTGKPSRAEAAINVPGYNP
Ga0311371_1095083413300029951PalsaTLHTAVAQAANPAVIAQEAQQFGMRQDPNLSFIDLKTGKIVSGKVSKSDAEINVPGYTP
Ga0311339_1143775113300029999PalsaQGAFQITSLQQQNANLTRQEQTLNNAVAQAANPAVIAKEAEQFGMRQDPNLSFIDLKNGKIVSGKVSKSDAEINVPGYTP
Ga0302181_1016421823300030056PalsaQNANLTRQEQTLNNAVAQAANPAVIAQEAEQFGMRQDPNLGFIDLKTGKVVSGTVSKSDAEINVPGYTP
Ga0311353_1046468023300030399PalsaAVAQAANPAVIAQAAEQFGMRQDPNLSFIDLKTGKIVSGKVSKSDAEINVPGYTP
Ga0311353_1060950723300030399PalsaTLNNAVAQAANPAVIAQEAEQFGMRQDPNLSFFDLKNGKIISGKVSKSDAEINVPGYTP
Ga0302184_1003412413300030490PalsaQITSLQQQNANLTRQEQTLNNAVAQAANPAVIAQEAQQFGMRQDPNLSFIDLKTGKIVSGKVSKSDAEINVPGYTP
Ga0311357_1091251313300030524PalsaQITSLQQQNANLTRQEQTLNNAVAQAANPAVIAKEAEQFGMRQDPNLSFIDLKTGKIVSGKISKSDAEIDVPGYTP
Ga0311356_1008738033300030617PalsaNANLTRQEQTLNNAVAQAANPAVIAQEAEQFGMRQDPNLSFFDLKNGKIISGKVSKSDAEINVPGYTP
Ga0302180_1008799123300031028PalsaQEQGLNNAVAQAANPAVIAQEAEQFGMRPDPNLSFIDLKNGKIVSGKVSKSDAEINVPGYTP
Ga0302180_1051833013300031028PalsaLTRQEQTLNNAVAQAANPAVIAQEAEQFGMRQDPNLSFIDTKTGKIVSGKVSKSDAEINVPGYTP
Ga0307500_1017742423300031198SoilQVAQAGNPAVIAKEARQLGMRPNPHLGFVDLKSGKIVVGKPSRAEAAINVPGYTP
Ga0170824_12314222033300031231Forest SoilQVAQAESPAQIAQEAQQLGMQQNPNLRFINLKTGKIVAGKVTPADSQINVPGYIP
Ga0302325_1202919313300031234PalsaQGAFQITSLQQQNANLTRQEQTLNNAVAQAANPAVIAQEAEQFGMRQDPNLSFIDLKTGKIVSGKVSKSDAEINVPGYAP
Ga0302326_1225378523300031525PalsaQVAQASSPGQIAQEAEAFGMRPNPELQFIDLKTGKVVKGQVPEADAGINVPGYTP
Ga0310686_10136679213300031708SoilEQTLSNEVAQAGNPAVIAQQAKQLGMRPNPYLGFIDLKTGKIVTGKPSRAEAAINVPGYN
Ga0310686_10841015913300031708SoilLSQQVAQASSPAQIAREAEAFGMQQNPNLQFINLKTGKIIKGQVSKTDEAINVPGYTP
Ga0310686_10841244123300031708SoilLSQQVAQASSPAQIAREAEAFGMQQNPNLQFINLKTGKIIKGRVSKTDAAINVPGYTP
Ga0307474_1038195723300031718Hardwood Forest SoilFRITSLQQQNAELARQAQTLTNQVAQAGNPAVIAQEAEQLGMRPNPHLGFVDLKTGKIVVGKPSKAEAAINVPGYTP
Ga0307474_1122135013300031718Hardwood Forest SoilASSPAQIAQEAEQFGMRPNPALQFINLKTGKVVKGKVSKADAQINVPGYNP
Ga0306917_1060924623300031719SoilQEQVLSQQVAQASSPARIAQEAEQFGMRQNPNLRFISLKTGKIVAGKISKADAAINVPGYSP
Ga0318505_1037463823300032060SoilQQILTNQVAQAGNPAVIAREAEQLGMRPNPHLGFIDPKTGKIIAGKPSRAEAAINVPGYT
Ga0311301_1035511713300032160Peatlands SoilQEQNANLARQEQTLTNEVAQAGSPAVIAAEAKQLGMRPNPYLGFLDLKTGKIVTGKPSSAEAAINVPGYTP
Ga0306920_10144042123300032261SoilLLAQQVAQASSPTQIAQEAEQLGMRPSPTLQFINLKTGKIVSGKVSSADAAINVPGYTP
Ga0335081_1002910313300032892SoilQEQTLTNEVAQAANPAVIAKQARQLGMRPNPRLGFIDLKTGKLIVGKPSAAEAAIDVPGYTP
Ga0370514_109814_1_1983300034199Untreated Peat SoilLARQEQTLTNAVAKAANPAVIAQEAQRLGMRQNPDLRFVNLKNGKIVTGKVSRSDAEINIPGYTP

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.