NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F105696

Metagenome Family F105696

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105696
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 62 residues
Representative Sequence MLGAGMCPITMAGLGTKMDVKKIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ
Number of Associated Samples 86
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 17.89 %
% of genes near scaffold ends (potentially truncated) 74.00 %
% of genes from short scaffolds (< 2000 bps) 74.00 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (79.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil
(10.000 % of family members)
Environment Ontology (ENVO) Unclassified
(28.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(47.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.42%    β-sheet: 16.28%    Coil/Unstructured: 59.30%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF08240ADH_N 22.00
PF09851SHOCT 6.00
PF13091PLDc_2 5.00
PF06167Peptidase_M90 5.00
PF00582Usp 3.00
PF00571CBS 3.00
PF07732Cu-oxidase_3 3.00
PF02896PEP-utilizers_C 2.00
PF07685GATase_3 1.00
PF01545Cation_efflux 1.00
PF07690MFS_1 1.00
PF01988VIT1 1.00
PF12697Abhydrolase_6 1.00
PF13407Peripla_BP_4 1.00
PF11181YflT 1.00
PF13380CoA_binding_2 1.00
PF01180DHO_dh 1.00
PF01322Cytochrom_C_2 1.00
PF13397RbpA 1.00
PF02163Peptidase_M50 1.00
PF00107ADH_zinc_N 1.00
PF00293NUDIX 1.00
PF01882DUF58 1.00
PF00072Response_reg 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG3228Mlc titration factor MtfA, regulates ptsG expressionSignal transduction mechanisms [T] 5.00
COG2132Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)Cell cycle control, cell division, chromosome partitioning [D] 3.00
COG0042tRNA-dihydrouridine synthaseTranslation, ribosomal structure and biogenesis [J] 1.00
COG0053Divalent metal cation (Fe/Co/Zn/Cd) efflux pumpInorganic ion transport and metabolism [P] 1.00
COG0069Glutamate synthase domain 2Amino acid transport and metabolism [E] 1.00
COG0167Dihydroorotate dehydrogenaseNucleotide transport and metabolism [F] 1.00
COG1230Co/Zn/Cd efflux system componentInorganic ion transport and metabolism [P] 1.00
COG1304FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomeraseEnergy production and conversion [C] 1.00
COG1633Rubrerythrin, includes spore coat protein YhjRInorganic ion transport and metabolism [P] 1.00
COG1721Uncharacterized conserved protein, DUF58 family, contains vWF domainFunction unknown [S] 1.00
COG1814Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 familyInorganic ion transport and metabolism [P] 1.00
COG2070NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase familyGeneral function prediction only [R] 1.00
COG3909Cytochrome c556Energy production and conversion [C] 1.00
COG3965Predicted Co/Zn/Cd cation transporter, cation efflux familyInorganic ion transport and metabolism [P] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms79.00 %
UnclassifiedrootN/A21.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908028|beta3_all_NODE_208111_len_11009_cov_9_423563All Organisms → cellular organisms → Bacteria11059Open in IMG/M
2124908035|B3_GZOS_CLC_ConsensusfromContig53025All Organisms → cellular organisms → Bacteria4459Open in IMG/M
3300002128|JGI24036J26619_10075695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus672Open in IMG/M
3300005336|Ga0070680_101571433All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300005337|Ga0070682_100238541All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1304Open in IMG/M
3300005337|Ga0070682_101358261Not Available606Open in IMG/M
3300005338|Ga0068868_101655857Not Available602Open in IMG/M
3300005354|Ga0070675_100464198All Organisms → cellular organisms → Bacteria1137Open in IMG/M
3300005354|Ga0070675_100649063All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria959Open in IMG/M
3300005367|Ga0070667_102315081All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300005406|Ga0070703_10129189All Organisms → cellular organisms → Bacteria926Open in IMG/M
3300005435|Ga0070714_101239569Not Available728Open in IMG/M
3300005439|Ga0070711_101368466All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300005440|Ga0070705_100721739All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300005458|Ga0070681_10465834All Organisms → cellular organisms → Bacteria1176Open in IMG/M
3300005458|Ga0070681_11453651All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300005458|Ga0070681_11542556All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales → Sphingobacteriales bacterium 44-15589Open in IMG/M
3300005459|Ga0068867_101599522All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300005530|Ga0070679_100011015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia8597Open in IMG/M
3300005548|Ga0070665_100177781All Organisms → cellular organisms → Bacteria → Proteobacteria2129Open in IMG/M
3300005614|Ga0068856_100058252All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.Bin1003815Open in IMG/M
3300005617|Ga0068859_102425650All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300005618|Ga0068864_101410153All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria698Open in IMG/M
3300005764|Ga0066903_106441469Not Available612Open in IMG/M
3300006173|Ga0070716_101584555All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300009094|Ga0111539_12617810All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300009148|Ga0105243_12991941All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300009630|Ga0116114_1016445All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 21-66-52278Open in IMG/M
3300010366|Ga0126379_11953168Not Available690Open in IMG/M
3300010401|Ga0134121_10905303All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300011440|Ga0137433_1261703All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300011443|Ga0137457_1214707All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300012891|Ga0157305_10159446All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300012916|Ga0157310_10094354All Organisms → cellular organisms → Bacteria952Open in IMG/M
3300013296|Ga0157374_10138915All Organisms → cellular organisms → Bacteria2357Open in IMG/M
3300013297|Ga0157378_12958359Not Available527Open in IMG/M
3300013297|Ga0157378_13079154Not Available518Open in IMG/M
3300014325|Ga0163163_11222512All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300014490|Ga0182010_10476865Not Available687Open in IMG/M
3300014494|Ga0182017_10328480All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 21-66-5954Open in IMG/M
3300014496|Ga0182011_10959727Not Available531Open in IMG/M
3300014502|Ga0182021_11718008All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 21-66-5756Open in IMG/M
3300014969|Ga0157376_10805301All Organisms → cellular organisms → Bacteria952Open in IMG/M
3300015200|Ga0173480_11034740Not Available543Open in IMG/M
3300015201|Ga0173478_10586250All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia576Open in IMG/M
3300015372|Ga0132256_100541254Not Available1277Open in IMG/M
3300015374|Ga0132255_104902612All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300018023|Ga0187889_10525013Not Available503Open in IMG/M
3300018025|Ga0187885_10030555All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales2928Open in IMG/M
3300019785|Ga0182022_1288261All Organisms → cellular organisms → Bacteria2399Open in IMG/M
3300019788|Ga0182028_1056174All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300019788|Ga0182028_1190676All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300019788|Ga0182028_1558069All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 21-66-51918Open in IMG/M
3300022519|Ga0224543_1001352All Organisms → cellular organisms → Bacteria956Open in IMG/M
3300023075|Ga0224520_1000062All Organisms → cellular organisms → Bacteria → Proteobacteria37002Open in IMG/M
3300024240|Ga0224522_1145020All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300025885|Ga0207653_10291267All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300025912|Ga0207707_10534530All Organisms → cellular organisms → Bacteria997Open in IMG/M
3300025912|Ga0207707_11274354All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales → Sphingobacteriales bacterium 44-15592Open in IMG/M
3300025916|Ga0207663_11133819All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300025923|Ga0207681_10015536All Organisms → cellular organisms → Bacteria4749Open in IMG/M
3300025928|Ga0207700_11603985All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300025930|Ga0207701_10002813All Organisms → cellular organisms → Bacteria17961Open in IMG/M
3300025930|Ga0207701_10777609All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300025938|Ga0207704_11001830All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300026078|Ga0207702_11776546Not Available609Open in IMG/M
3300026078|Ga0207702_12213935All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300026118|Ga0207675_100006244All Organisms → cellular organisms → Bacteria11308Open in IMG/M
3300026474|Ga0247846_1005124All Organisms → cellular organisms → Bacteria2201Open in IMG/M
3300028768|Ga0307280_10001389All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales5832Open in IMG/M
3300030019|Ga0311348_10388293All Organisms → cellular organisms → Bacteria1042Open in IMG/M
3300030019|Ga0311348_11006742Not Available620Open in IMG/M
3300030294|Ga0311349_10776712All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300030294|Ga0311349_11289735All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300031241|Ga0265325_10525566All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300031521|Ga0311364_10120533All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium2732Open in IMG/M
3300031547|Ga0310887_10630759All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300031682|Ga0318560_10391001All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter oryzae752Open in IMG/M
3300031764|Ga0318535_10284379All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter oryzae740Open in IMG/M
3300031782|Ga0318552_10157564All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter oryzae1142Open in IMG/M
3300031799|Ga0318565_10282488Not Available807Open in IMG/M
3300031821|Ga0318567_10609384All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300031902|Ga0302322_101405193All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300031910|Ga0306923_11103717All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter oryzae854Open in IMG/M
3300031912|Ga0306921_10115058All Organisms → cellular organisms → Bacteria → Proteobacteria3129Open in IMG/M
3300031947|Ga0310909_10636879All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter oryzae889Open in IMG/M
3300032003|Ga0310897_10110297All Organisms → cellular organisms → Bacteria1107Open in IMG/M
3300032179|Ga0310889_10420260All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300033179|Ga0307507_10560480Not Available600Open in IMG/M
3300033743|Ga0334844_017123All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 21-66-51437Open in IMG/M
3300033797|Ga0334815_000360All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum6219Open in IMG/M
3300033820|Ga0334817_000100All Organisms → cellular organisms → Bacteria27748Open in IMG/M
3300033825|Ga0334843_001702All Organisms → cellular organisms → Bacteria → Proteobacteria3240Open in IMG/M
3300033890|Ga0334810_010499All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 21-66-52447Open in IMG/M
3300034070|Ga0334822_019115All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 21-66-51583Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere10.00%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil10.00%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen8.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.00%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen6.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere3.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.00%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.00%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza1.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908028Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3EnvironmentalOpen in IMG/M
2124908035Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3EnvironmentalOpen in IMG/M
3300002128Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009630Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011440Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2EnvironmentalOpen in IMG/M
3300011443Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2EnvironmentalOpen in IMG/M
3300012891Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2EnvironmentalOpen in IMG/M
3300012916Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014490Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaGEnvironmentalOpen in IMG/M
3300014494Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaGEnvironmentalOpen in IMG/M
3300014496Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaGEnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018025Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100EnvironmentalOpen in IMG/M
3300019785Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300019788Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300022519Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 1-5EnvironmentalOpen in IMG/M
3300023075Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T-25EnvironmentalOpen in IMG/M
3300024240Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T25EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026474Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T0EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300030019II_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300030294II_Fen_E3 coassemblyEnvironmentalOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031521III_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300033179Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EMHost-AssociatedOpen in IMG/M
3300033743Peat soil microbial communities from Stordalen Mire, Sweden - 714 E1 5-9EnvironmentalOpen in IMG/M
3300033797Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-SEnvironmentalOpen in IMG/M
3300033820Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-DEnvironmentalOpen in IMG/M
3300033825Peat soil microbial communities from Stordalen Mire, Sweden - 714 E1 1-5EnvironmentalOpen in IMG/M
3300033890Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-MEnvironmentalOpen in IMG/M
3300034070Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-MEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
beta3_all_012683602124908028SoilXPWQGGMMGAGMMGGGMLGAGMCPIMMAGLGTKMDVKKIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ
B3_GZOS_CLC_003875802124908035SoilPAAAASAQPGPWQGGMMGAGMMGGGMLGAGMCPIMMAGLGTKMDVKKIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ
JGI24036J26619_1007569513300002128Corn, Switchgrass And Miscanthus RhizosphereGGMQGSSGMMGGMGPMSMMGGATTKVDVKKVDKGVTITMTSPDPATAARLQKMAEAMRLMHEATAQ*
Ga0070658_1001009533300005327Corn RhizosphereMMGAGTKIAVKNVDKGVTMTFTSDDAATVARLRKMAEGMRLMHEATAGAR*
Ga0070680_10096050523300005336Corn RhizosphereMMGAGTKIAVKNVDKGVTMTFTSDDAATVARLRKMAEGIRLMHEATASER*
Ga0070680_10157143313300005336Corn RhizosphereMMGGDARVEVKNIDKGVTITITSADPAKVKRLQKMAEAMRLMHEATMP*
Ga0070682_10023854113300005337Corn RhizosphereGMCPMMGGGPMGGATTKIDVKKIDKGVTITFTSPDAATAARLQKMAEAMRLMHEATAP*
Ga0070682_10135826113300005337Corn RhizosphereMGAMMGAPGTKVDVKKTDKGVTITLTAPDAGGAARLQKMAEAMRLMHEAMAQ*
Ga0068868_10165585723300005338Miscanthus RhizosphereGGMMGGGMMGGSNTKVDVKKIDKGVTITMTSPDAATAARLQKMAEAMRLMHEASSQ*
Ga0070675_10046419813300005354Miscanthus RhizosphereGGMGMGMGMGMGMMGGMCHMGMGSADTKVDVKNVDKGVTITFTSTDPAKVVRLQKMAEAMRLMHEANTQ*
Ga0070675_10064906313300005354Miscanthus RhizosphereGGMMGGGMMGGMGPMMGGAATKVDVKKIDKGVTITMTSADPATVARLQKMAEAMRLMHEATAQ*
Ga0070667_10231508113300005367Switchgrass RhizosphereGGGLCPMGMGSADTKVEVKNVPKGVTITFTSTDATRVARLQKMAEAMRLMHEATAP*
Ga0070703_1012918923300005406Corn, Switchgrass And Miscanthus RhizospherePMGLGGPDTKVEVKNIDKGVTITVTSTDKARVARLQKMAEAMRLMHEATAP*
Ga0070714_10123956923300005435Agricultural SoilCPMMGGGMMGGAKTKVDVKKVDKGVTITLTSPDAATAARLQKMAEAMRLMHEAMAQ*
Ga0070711_10136846623300005439Corn, Switchgrass And Miscanthus RhizosphereGMMGGAKTKVDVKKIDKGVTITLTSSDAATVTRLQKMAEAMRLMHEAATQ*
Ga0070705_10072173923300005440Corn, Switchgrass And Miscanthus RhizosphereFCPMGLGGPDTKVEVKNIDKGVTITVTSTDKARVARLQKMAEAMRLMHEATAP*
Ga0070681_1046583423300005458Corn RhizosphereATQNSDTPASPGGAMMGKGAMGGPMMGGMCPMMDGGMMGGAKTKVDVKKIDKGVTITLTSSDAATVTRLQKMAEAMRLMHEAATQ*
Ga0070681_1145365123300005458Corn RhizosphereGTGMGMGMMGGGFCPMGMAGADTKVDVKNVDKGVTITITSTDATRVARIQKMAEAMRLMHEATAP*
Ga0070681_1154255623300005458Corn RhizospherePMMEGGMMGGPKTKVEVKKIDKGVTITLTSLDAATVTRIQKMAEAMRLMHEATTQ*
Ga0068867_10159952213300005459Miscanthus RhizosphereGMMGGGMMGGMCPMSMGGADTKVEVKNVPKGVTITFTSTDATRVARLQKMAEAMRLMHEATAP*
Ga0070679_10001101593300005530Corn RhizosphereMMGGGMMGGAKTKVDVKKIDKGVTITFTSSDAATAARLQKMAEAMRLMHEAMSQ*
Ga0070665_10017778133300005548Switchgrass RhizosphereGMMHGGMMGGGMCPMMGGGPMGGATTKIDVKKIDKGVTITFTSPDAATAARLQKMAEAMRLMHEATAP*
Ga0068856_10005825213300005614Corn RhizosphereHMMGGMGAMMNAPGTKVDVKKTDKGVTITLTAPDAAGAARLQKMAEAMRLMHEAMGQ*
Ga0068856_10145934623300005614Corn RhizosphereMMGGAKTKVDVKKIEKGVAITLTSPDAATATRLQKMAEAMRLMHEATAP*
Ga0068859_10242565023300005617Switchgrass RhizosphereGSMGMMSGGFCPMGLGGPDTKVEVKNIDKGVTITVTSTDKARVARLQKMAEAMRLMHEATAP*
Ga0068864_10141015323300005618Switchgrass RhizosphereMMMGGPGTKMAVKNVDKGVTITLTSADPAMATRLQKMAEGMRLMHEAMTPEK*
Ga0066905_10184871813300005713Tropical Forest SoilMMGGAATKIDVKKIDKGVTITLTAPDAASAARLQQMAEAMRLMHQATAQ*
Ga0066903_10644146913300005764Tropical Forest SoilGGGMCPMMGSADTQMTVKNVDKGVTITWTSSDPAKVARLQKMAEAMRLMHEATAQ*
Ga0070716_10158455513300006173Corn, Switchgrass And Miscanthus RhizosphereCPMGMGDADTRVDVKNVDKGVTITLTSTDPARFVRLQKMAEAMRLMHEAMKP*
Ga0111539_1261781023300009094Populus RhizosphereGMGMGGGMPMMGMMGGDARVEVKNVDKGVTITITSADPAKVKRLQKMAEAMRLMHEANMP
Ga0105243_1299194113300009148Miscanthus RhizosphereGMGMGSMGMMSGGFCPMGLGGPDTKVEVKNIDKGVTITVTSTDKARVARLQKMAEAMRLMHEATAP*
Ga0116114_101644523300009630PeatlandMMGAGMMGGGMLGAGMCPIMMAGLGTKMDVKKIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ*
Ga0126379_1195316813300010366Tropical Forest SoilGMMMGGAKTKVDVKKIDKGVTITMTSADAATVTRIQKMAEAMRLMHEATTQ*
Ga0134121_1090530313300010401Terrestrial SoilGGSGGCGDTTVMGGGFCPMGMAGADTKVDVKNVDKGVTITITSTDTARVARIQKMAEAMRLMHEATAP*
Ga0137433_126170323300011440SoilGMPMGAMMCGDARVEVKNVDKGVTITITSADPAKVKRLQKITEAMHLMHEANMP*
Ga0137457_121470723300011443SoilGMGMGMMGGMCPMGLGSADTKVEVKNVDKGVTITLTSTDQAKVARLQKMAEAMRLMHEATAP*
Ga0157305_1015944623300012891SoilGGGMGMGGGMPMGAMPMGAMSMMGGDARVEVKNVDKGVTITITSTDPAKVKRLQKMAEAMRLMHEANMP*
Ga0157310_1009435413300012916SoilMCGGMMSGGMPMMGMMGMMGGDARVELKNVDKGVTITITSADPAKVKRLQKMAEAMRLMHEANMP*
Ga0157374_1013891533300013296Miscanthus RhizosphereCPMMDGGMMGGAKTKVDVKKIDKGVTITLTSSDAATVTRLQKMAEAMRLMHEAATQ*
Ga0157378_1295835923300013297Miscanthus RhizosphereMRGATMMGGGGMMAMMGGGGMCPMMGASSTKVEVKKIDKGVTITMTSSDAATAVRLQKMAEAMRLMHEATAE*
Ga0157378_1307915423300013297Miscanthus RhizosphereGGGMMGGGMMGAGTKVDVTKTEKGVTMTFTAPDATSAVRLQKMAEAMRLMHEATTQ*
Ga0163163_1122251213300014325Switchgrass RhizosphereMGMGTGMMGGMCHMGMGSADTKVDVKNVDKGVTITFTSTDQAKVVRLQKMAEAMRLMHEATTQ*
Ga0182010_1047686523300014490FenMLGAVMCPIMMAGLGTKMDVKKIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ*
Ga0182017_1032848023300014494FenMMGAGMMGGGMLGAGMCPIMMAGLGTKMDVKKIEKGVSITFTSTDPLIVARLQKMAEAMRLMHEAMMQ*
Ga0182011_1095972713300014496FenMMGAGMMGGGMLGAGMCPIMMAGLGTKMDVKKIDKGVSITFTSTDPLTVARLQKMAEAMRLMHE
Ga0182021_1171800823300014502FenMMGAGMMGGGMLGAGMCPIMMAGLGTKMDVKKIDKGVSITFTSTDPLTVARLQKMAEAMRLMH
Ga0157376_1080530123300014969Miscanthus RhizosphereGMGMGMMGGGFCPMGMAGADTKVDVKNVDKGVTITITSTDTARVARIQKMAEAMRLMHEATAP*
Ga0173480_1103474023300015200SoilNMGMGMGMMGGGMGPMGISAADTKVDVKNIDKGVTMTFTSTDPARVARLQKMAEAMRLMHEANVP*
Ga0173478_1058625033300015201SoilMMGGMCHMGMGSADTKVEVKNVEKGVTISFTSTDQAKVARLQKMAEAMRLMHEANTQ*
Ga0132256_10054125433300015372Arabidopsis RhizosphereMGGMGTMMGGATTKVDVKKVDKGVTITMTSPEPATAARLQKMAEAMRLMHEATAQ*
Ga0132255_10490261223300015374Arabidopsis RhizosphereGMGMGMGMMGGGLCPMGMAGADTKVEVKNIDKGVTITLTSSDATRVTRLQKMAEAMRLMHEATAP*
Ga0187889_1052501313300018023PeatlandGMMGGGMLGAGMCPIMMAGLGTKMDVKKIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ
Ga0187885_1003055513300018025PeatlandASSTAKPAAAASAQPGPWQGGMMGAGMMGGGMLGAGMCPIMMAGLGTKMDVKKIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ
Ga0182022_128826143300019785FenVDAGRRDVPITMAGLGTKMDVKKIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ
Ga0182028_105617413300019788FenMLGAGMCPITMAGLGTKMDVKKIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ
Ga0182028_119067613300019788FenGSWQSGMIGAGMMGGGMLGAGMCPITMAGLGTKMDVKKIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ
Ga0182028_155806923300019788FenMLGAGMCPITMAGLGTKMDVKKIDKGVSITFTSTDPLTVARLQKMAEAMRLMHQAMMQ
Ga0224543_100135223300022519SoilMGGGMLGAGMCPIMMAGLGTKMDIKRIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ
Ga0224520_1000062113300023075SoilMMGGGMLGAGMCPIMMAGLGTKMDIKRIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ
Ga0224522_114502013300024240SoilDPAAPAQPGPWQSGMMGGGMMGGGMLGAGMCPIMMAGLGTKMDIKRIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ
Ga0207653_1029126723300025885Corn, Switchgrass And Miscanthus RhizosphereRPMGLGGPDTKVEVKNIDKGVTITVTSTDKARVARLQKMAEAMRLMHEATAP
Ga0207684_1152419723300025910Corn, Switchgrass And Miscanthus RhizosphereMMGGANTKVDVKKIDKGVTITLTSTDPAAVTRLQKMAEAMRLMHEATAP
Ga0207707_1053453013300025912Corn RhizosphereATQNSDTPASPGGAMMGKGAMGGPMMGGMCPMMDGGMMGGAKTKVDVKKIDKGVTITLTSSDAATVTRLQKMAEAMRLMHEAATQ
Ga0207707_1127435423300025912Corn RhizosphereCPMMEGGMMGGPKTKVEVKKIDKGVTITLTSLDAATVTRIQKMAEAMRLMHEATTQ
Ga0207663_1113381923300025916Corn, Switchgrass And Miscanthus RhizosphereGMMGGAKTKVDVKKIDKGVTITLTSSDAATVTRLQKMAEAMRLMHEAATQ
Ga0207681_1001553653300025923Switchgrass RhizosphereSMGMMSGGFCPMGLGGPDTKVEVKNIDKGVTITVTSTDKARVARLQKMAEAMRLMHEATA
Ga0207700_1160398523300025928Corn, Switchgrass And Miscanthus RhizosphereMMGGMCPMMGGGMMGGMMGGAKTKVDVKKIDKGVTITMTSPDAATAARIQKMAEAMRLMHEATSQ
Ga0207701_1000281313300025930Corn, Switchgrass And Miscanthus RhizosphereGEGMMGGGMMGGGMCPMMGGASTKVEVKKIDKGVTITMTSSDAATATRLQKMAEAMRLMHEATAQ
Ga0207701_1077760913300025930Corn, Switchgrass And Miscanthus RhizosphereMGPMAMMGGDARVEVKNVDKGVTITITSTDPAKVKRLQKMAEAMRLMHEANMP
Ga0207704_1100183023300025938Miscanthus RhizosphereSMCGGMGTGMMGGGMAMGGMPMGPMAMMGGDARVEVKNVDKGVTITITSTDPAKVKRLQKMAEAMRLMHEANMP
Ga0207702_1177654613300026078Corn RhizosphereMGGGMGPMMMGGPGTKVAVKNVDKGVTITMTSNDPAAVVRLQKMAEAMRLMHEAMTPEK
Ga0207702_1221393523300026078Corn RhizosphereGGGMMGGGMMGGAKTKVDVKKIDKGVTITFTSSDAATAARLQKMAEAMRLMHEAMSQ
Ga0207675_100006244133300026118Switchgrass RhizosphereMGPGMMGGGFCPMGLGGPDTKVEVKNIDKGVTITVTSTDKARVARLQKMAEAMRLMHEATAP
Ga0247846_100512443300026474SoilSAAAAPAQPGPWQSGMMGGGMMGGGMLGAGMCPIMMAGLGTKMDIKRIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ
Ga0307280_1000138983300028768SoilMCAGMMGGGMGGGMMGGMPMGPMAMMGGDARVEVKNVEKGVTITITSTDPAKVKRLQKMAEAMRLMHEANMP
Ga0311348_1038829323300030019FenGMMGGGMLGAGMCPIMMAGLGTKMDIKRIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ
Ga0311348_1100674213300030019FenSAAAAPAQPGPWQGGMMGAGMMGGGMLGAGMCPIMMAGLGTKMDVKKIDKGVSITFTSTDPLIVARLQKMAEAMRLMHEAMMQ
Ga0311349_1077671213300030294FenKPAASAPAQPGPWQGGMMGAGMMGGGMLGAGMCPIMMAGLGTKMDVKKIDKGVSITFTSTDPLIVARLQKMAEAMRLMHEAMMQ
Ga0311349_1128973523300030294FenGGMLGAGMCPIMMAGLGTKMDVKKIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ
Ga0265325_1052556613300031241RhizosphereCPMMMGGPDTKIEVKKIDKGVTLTLTSSDAATTTRLQKMAEAMRLMHEAMTE
Ga0311364_1012053323300031521FenMCPIMMAGLGTKMDIKRIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ
Ga0310887_1063075923300031547SoilGMMGGCFCPMGLGGPDTKVEVKNIDKGFTITVTSTDKARVARLQKMAEAMRLMHEATAP
Ga0318560_1039100133300031682SoilMMGGGGMMMGGAKTKVDVKKIDKGVTITMTSTDAATVTRIQKMAEAMRLMHEAMSQ
Ga0318535_1028437913300031764SoilICPMMGGGGMMMGGAKTKVDVKKIDKGVTITMTSTDAATVTRIQKMAEAMRLMHEAMSQ
Ga0318552_1015756443300031782SoilCPMMGGGGMMMGGAKTKVDVKKIDKGVTITMTSTDAATVTRIQKMAEAMRLMHEAMSQ
Ga0318565_1028248813300031799SoilGYGMMGGGMMGMMGGGMMGGASTKIDVKKIEKGVTITMTSADAATVTRIQKMAEAMRLMHEAMSQ
Ga0318567_1060938413300031821SoilGGGMMMGGAKTKVDVKKIDKGVTITMTSTDAATVTRIQKMAEAMRLMHEAMSQ
Ga0302322_10140519323300031902FenGAAPAPPGPWQGGMMGAGMMGGGMLGAGMCPIMMAGLGTKMDVKKIDKGVSITFTSTDPLIVARLQKMAEAMRLMHEAMMQ
Ga0306923_1110371733300031910SoilGGMMMGGAKTKVDVKKIDKGVTITMTSTDAATVTRIQKMAEAMRLMHEAMSQ
Ga0306921_1011505863300031912SoilMGGGMMGMMGGGPMGMMMGGASTKIDVKKIEKGVTITMTSSDPATAVRLQKMWEAMRLMHEAMTQ
Ga0310909_1063687913300031947SoilGMCPMMGGGGMMMGGAKTKVDVKKIDKGVTITMTSTDAATVTRIQKMAEAMRLMHEAMSQ
Ga0310897_1011029713300032003SoilMMGGGFCPMGLGGPDTKVEVKNIDKGFTITVTSTDKARVARLQKMAEAMRLMHEATAP
Ga0310889_1042026013300032179SoilMPMMGMMGGDARVEVKNIDKGVTITITSADPAKVKRLQKMAEAMRLMHEATMP
Ga0307507_1056048013300033179EctomycorrhizaMMGGGMCSMMMGSPETKIDVKKIDKGVTITLTSTDAATTTRLQKMAEAMRLMHEAMTE
Ga0334844_017123_1029_12353300033743SoilMMGAGMMGGGMLGAGMCPIMMAGLGTKMDVKKIEKGVSITFTSTDPLIVARLQKMAEAMRLMHEAMMQ
Ga0334815_000360_4710_49163300033797SoilMMGAGMMGGGMLGAGMCPIMMAGLGTKMDVKKIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ
Ga0334817_000100_17436_176423300033820SoilMMGGGMMGGGMLGAGMCPIMMAGLGTKMDIKRIDKGVSITFTSTDPLTVARLQKMAEAMRLMHEAMMQ
Ga0334843_001702_2495_27013300033825SoilMMGAGMMGGGMLGAGMCPITMAGLGTKMDVKKIDKGVSITFTSTDPLTVARLQKMAEAMLLMHEAMMQ
Ga0334810_010499_8_2143300033890SoilMMGAGMMGGGMLGAGMCPITMAGLGTKMDVKKIDKGVSITFTSTDPLTVARLQKMAEAMRLMHQAMMQ
Ga0334822_019115_319_5253300034070SoilMMGAGMMGGGMLGAGMCPIMMAGLGTKMDVKKIDKGVSITFTSTDPLIVARLQKMAEAMRLMHEAMMQ

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.