NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F105622

Metagenome Family F105622

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105622
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 123 residues
Representative Sequence VNVLVLDETLELSAPVRGLATLYGWDPHFVGSLHELELAVRAHGRPGLVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRDSTDAPPPLPGVQWLERPAEEAELTAALSRVVSRLGLG
Number of Associated Samples 95
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 92.00 %
% of genes near scaffold ends (potentially truncated) 96.00 %
% of genes from short scaffolds (< 2000 bps) 86.00 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.83

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(17.000 % of family members)
Environment Ontology (ENVO) Unclassified
(37.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(31.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 30.61%    β-sheet: 17.01%    Coil/Unstructured: 52.38%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.83
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
c.2.1.2: Tyrosine-dependent oxidoreductasesd1gy8a_1gy80.78284
c.23.1.0: automated matchesd6xvud_6xvu0.76941
c.2.1.0: automated matchesd6vloa16vlo0.76794
c.2.1.2: Tyrosine-dependent oxidoreductasesd1rkxa_1rkx0.76757
c.23.1.0: automated matchesd3khta_3kht0.76618

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF07589PEP-CTERM 42.00
PF02746MR_MLE_N 5.00
PF13378MR_MLE_C 4.00
PF00990GGDEF 4.00
PF02954HTH_8 2.00
PF04199Cyclase 1.00
PF00158Sigma54_activat 1.00
PF01979Amidohydro_1 1.00
PF00005ABC_tran 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG4948L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamilyCell wall/membrane/envelope biogenesis [M] 10.00
COG1878Kynurenine formamidaseAmino acid transport and metabolism [E] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2067725002|GPICC_F5MS3JC01DKQ41All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium505Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0647013All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium883Open in IMG/M
3300004052|Ga0055490_10073566All Organisms → cellular organisms → Bacteria → Proteobacteria929Open in IMG/M
3300004145|Ga0055489_10051236All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300004480|Ga0062592_100393102All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300005093|Ga0062594_100192762All Organisms → cellular organisms → Bacteria1408Open in IMG/M
3300005293|Ga0065715_10796562All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium602Open in IMG/M
3300005336|Ga0070680_101435289All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300005445|Ga0070708_101884583All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300005458|Ga0070681_10919014All Organisms → cellular organisms → Bacteria794Open in IMG/M
3300005468|Ga0070707_100200461All Organisms → cellular organisms → Bacteria1945Open in IMG/M
3300005549|Ga0070704_100059503All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2726Open in IMG/M
3300005719|Ga0068861_100128253All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales2055Open in IMG/M
3300005876|Ga0075300_1062321All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300005890|Ga0075285_1013725All Organisms → cellular organisms → Bacteria924Open in IMG/M
3300006028|Ga0070717_11425682All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300006175|Ga0070712_101113177All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300007258|Ga0099793_10477555All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300009088|Ga0099830_10329276All Organisms → cellular organisms → Bacteria1224Open in IMG/M
3300009090|Ga0099827_10214436All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1606Open in IMG/M
3300009098|Ga0105245_12700110All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium550Open in IMG/M
3300009176|Ga0105242_12765229All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300009795|Ga0105059_1022087All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium706Open in IMG/M
3300009808|Ga0105071_1073238All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300010376|Ga0126381_103266868All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300010401|Ga0134121_10562649All Organisms → cellular organisms → Bacteria1060Open in IMG/M
3300010403|Ga0134123_10214062All Organisms → cellular organisms → Bacteria1650Open in IMG/M
3300011406|Ga0137454_1031342All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300011419|Ga0137446_1075057All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium782Open in IMG/M
3300012035|Ga0137445_1069382All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300012146|Ga0137322_1064898All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300012171|Ga0137342_1123935All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300012349|Ga0137387_10782380All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300012685|Ga0137397_10060162All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium2739Open in IMG/M
3300012896|Ga0157303_10039742All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium913Open in IMG/M
3300012922|Ga0137394_10357386All Organisms → cellular organisms → Bacteria1247Open in IMG/M
3300012923|Ga0137359_11418624All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300012927|Ga0137416_10864112All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300012929|Ga0137404_10337451All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1316Open in IMG/M
3300012987|Ga0164307_10144039All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1560Open in IMG/M
3300014308|Ga0075354_1003598All Organisms → cellular organisms → Bacteria1940Open in IMG/M
3300014325|Ga0163163_10201784All Organisms → cellular organisms → Bacteria2037Open in IMG/M
3300015170|Ga0120098_1025912All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300015264|Ga0137403_10449775All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1163Open in IMG/M
3300015371|Ga0132258_10325185All Organisms → cellular organisms → Bacteria3793Open in IMG/M
3300015373|Ga0132257_103859172All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300017944|Ga0187786_10277856All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300017974|Ga0187777_10184087All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1403Open in IMG/M
3300017999|Ga0187767_10294024All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium551Open in IMG/M
3300018054|Ga0184621_10053879All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1351Open in IMG/M
3300018055|Ga0184616_10418397All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300018056|Ga0184623_10214247All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300018063|Ga0184637_10173073All Organisms → cellular organisms → Bacteria1329Open in IMG/M
3300018079|Ga0184627_10170538All Organisms → cellular organisms → Bacteria1152Open in IMG/M
3300018084|Ga0184629_10372705All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300018422|Ga0190265_10294466All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1690Open in IMG/M
3300018429|Ga0190272_10123281All Organisms → cellular organisms → Bacteria1723Open in IMG/M
3300018429|Ga0190272_12960965All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300019789|Ga0137408_1448613All Organisms → cellular organisms → Bacteria1858Open in IMG/M
3300019879|Ga0193723_1047779All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300019879|Ga0193723_1075612All Organisms → cellular organisms → Bacteria969Open in IMG/M
3300019883|Ga0193725_1100689All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300019883|Ga0193725_1123759All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300020006|Ga0193735_1082977All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300020579|Ga0210407_10167954All Organisms → cellular organisms → Bacteria1696Open in IMG/M
3300021078|Ga0210381_10211099All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300021088|Ga0210404_10012843All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria3467Open in IMG/M
3300021344|Ga0193719_10021924All Organisms → cellular organisms → Bacteria2731Open in IMG/M
3300021344|Ga0193719_10328066All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300021432|Ga0210384_10016445All Organisms → cellular organisms → Bacteria → Proteobacteria7253Open in IMG/M
3300022534|Ga0224452_1079041All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300024224|Ga0247673_1063998All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300025165|Ga0209108_10173067All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1128Open in IMG/M
3300025558|Ga0210139_1053372All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium817Open in IMG/M
3300025922|Ga0207646_10146626All Organisms → cellular organisms → Bacteria2127Open in IMG/M
3300026118|Ga0207675_100018522All Organisms → cellular organisms → Bacteria6494Open in IMG/M
3300026285|Ga0209438_1000779All Organisms → cellular organisms → Bacteria10122Open in IMG/M
3300026358|Ga0257166_1032169All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300026480|Ga0257177_1005238All Organisms → cellular organisms → Bacteria1565Open in IMG/M
3300026494|Ga0257159_1001460All Organisms → cellular organisms → Bacteria3089Open in IMG/M
3300026514|Ga0257168_1072959All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300026515|Ga0257158_1114564All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300026551|Ga0209648_10155223All Organisms → cellular organisms → Bacteria1802Open in IMG/M
3300027273|Ga0209886_1077273All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300027765|Ga0209073_10058568All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1283Open in IMG/M
3300027862|Ga0209701_10696215All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium524Open in IMG/M
3300027952|Ga0209889_1068433All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium728Open in IMG/M
(restricted) 3300027995|Ga0233418_10334727All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300028673|Ga0257175_1084314All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300028771|Ga0307320_10465197All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300028792|Ga0307504_10115923All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300028807|Ga0307305_10091759All Organisms → cellular organisms → Bacteria1403Open in IMG/M
3300030620|Ga0302046_10204559All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1623Open in IMG/M
(restricted) 3300031150|Ga0255311_1001954All Organisms → cellular organisms → Bacteria3793Open in IMG/M
3300031152|Ga0307501_10146427All Organisms → cellular organisms → Bacteria638Open in IMG/M
(restricted) 3300031248|Ga0255312_1151051All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium578Open in IMG/M
3300031720|Ga0307469_10802916All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300031720|Ga0307469_11324645All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300032205|Ga0307472_100942961All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium803Open in IMG/M
3300032893|Ga0335069_10233634All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2221Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil17.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil12.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.00%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil5.00%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand4.00%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands3.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.00%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil2.00%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.00%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil2.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.00%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.00%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.00%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.00%
FossillEnvironmental → Terrestrial → Soil → Fossil → Unclassified → Fossill1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.00%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2067725002Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300004052Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004145Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005876Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401EnvironmentalOpen in IMG/M
3300005890Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009795Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50EnvironmentalOpen in IMG/M
3300009808Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011406Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT539_2EnvironmentalOpen in IMG/M
3300011419Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2EnvironmentalOpen in IMG/M
3300012035Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT338_2EnvironmentalOpen in IMG/M
3300012146Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT400_2EnvironmentalOpen in IMG/M
3300012171Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT466_2EnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012896Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300014308Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015170Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017944Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017999Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MGEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018055Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coexEnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300024224Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14EnvironmentalOpen in IMG/M
3300025165Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1EnvironmentalOpen in IMG/M
3300025558Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026358Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-BEnvironmentalOpen in IMG/M
3300026480Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-BEnvironmentalOpen in IMG/M
3300026494Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-AEnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300026515Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-AEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027273Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027952Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027995 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_1_MGEnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
GPICC_019000502067725002SoilLERNSFEECKTVNVLVLDETMELAVPIRGLAGISGWEPHFVGSLHELEVAVAAQGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGSGGSESGAPALAGCEWLERPSGRGGVAAARGAG
ICChiseqgaiiDRAFT_064701323300000033SoilVNVLVLDETMELAVPIRGLAGISGWEPHFVGSLHELEVAVAAQGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGSGGSESGAPALAGVQWLERPSGEGELAAALERVVSRLGLGGRSGGPSRNPA
Ga0055490_1007356623300004052Natural And Restored WetlandsVNVLVLDETLDLSAPVRGLASLNGWEPHFVGSLHELELAVQAHGRPALTLVNLQPPLTAWELGQRLRGLGLDSPVVVLGAAGSGTSAPALPGMQWLERPAGEADLTAVLERVVGRLGFGARAASRGAAEHGLVGQSAALGEVLAKIEKVAPGDA
Ga0055489_1005123623300004145Natural And Restored WetlandsVNVLVLDETLELSAPVRGLATLYGWEPDFVGSLHELEMAIRAHGRPGLVIVNLQAPLTAWELGQRLRSLGSDSPVVVLGAGGSTDMPPALPGVQWLERPAEEAELTAA
Ga0062592_10039310223300004480SoilVNVLVLDETLELSAPVRGLATLYGWDPHFVGSLHELELAVRAHGRPGLVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRDSTDAPPPLPGVQWLERPAEEAELTAALSRVVSRLGLGGRRIGSGGDAAAHGLVGQSSQLAEVLA
Ga0062594_10019276213300005093SoilVNVLVLDETLELSAPVRGLATLYGWDPHFVGSLHELELAVRAHGRPGLVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRDSTDAPPPLPGVQWLERPAEEAELTAALSRVVSRLGLG
Ga0065715_1079656213300005293Miscanthus RhizosphereVNVLVLDETMELSAPVRELASMGGWEPHFVGSLHELELAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGSGGSESGAPALAGVQWLERPSGEGELAAALERVVSRLG
Ga0070680_10143528913300005336Corn RhizosphereVNVLVLDETLELSAPVRGLASLYGWEPHFVGSLHEMEMAVRAHGRPELVVVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRGTADAPPPLPGVQWLERPAEEAELAAALGRV
Ga0070708_10188458313300005445Corn, Switchgrass And Miscanthus RhizosphereVNVLVLDETLELSAPVRGLATLYGWDPHFVGSLHELELAVRAHGRPGLVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRDSTDAPPPLPGVQWLERPAEEAELTAALSRVVSRLGLGGRRIGSGGDAAAH
Ga0070681_1091901413300005458Corn RhizosphereVNVLVLDETLELSAPVRGLATLYGWDPHFVGSLHELELAVRAHGRPGLVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRDSTDAPPPLPGVQWLERPAEEAELTAALSRVVSRLGLGGRRIGSGGDAAAHGLVGQSSQLAEVLAKIE
Ga0070707_10020046113300005468Corn, Switchgrass And Miscanthus RhizosphereVNVLVLDETLELSAPVRELANLHGWQPHFVGSLHEVELAVQAHGRPALLVVNLQPPLTGWELGQRLRGLGLESPVVVLGARGPEGEAAALPGVQWLERPVGEAELGAALEQVVSRLGL
Ga0070704_10005950333300005549Corn, Switchgrass And Miscanthus RhizosphereVNVLILDESLELAGVVGRLAPVRGWQPHFIGSLLELELGVRAYGRPALVIVNLQAPLTAWELGQRLRSLEGDSPVVVLRPAGSVDALPPLPGVQWLERPAEEAELTEALGRVVSRLGLAGRPLGGGLATHGLIGQSPQLGEVL
Ga0068861_10012825313300005719Switchgrass RhizosphereVNVLVLDETMELAVPIRGLAGISGWEPHFVGSLHELEVAVAAQGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGSGGSESGAPALAGVQWLERPSGEGELAAALER
Ga0075300_106232113300005876Rice Paddy SoilVNVLVLDETMELSAPVRGLASICGWEPHFVGSLHELELAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGGAGSEGGASALAGVQWLERPAGEAELAAAL
Ga0075285_101372523300005890Rice Paddy SoilVNVLVLDETMELSAPVRGLASICGWEPHFVGSLHELELAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVVGGGGSEGAAPALAGVQWLERP
Ga0070717_1142568213300006028Corn, Switchgrass And Miscanthus RhizosphereVNVLVLDETMELSAPIHGLASIGGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGAAGHEGAAPALAGVQWLERPSGEAELTAALERVVSRLGLGGRSSGGSRAAGHGLVGQSAQ
Ga0070712_10111317713300006175Corn, Switchgrass And Miscanthus RhizosphereVNVLVLDETMELSAPVRELSSNGGWEPHFVGSLHELELAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGAAGHEGAAPALAGVQWLERPSGEAELTAALERVVSRLG
Ga0099793_1047755513300007258Vadose Zone SoilVNVLVLDETMELSAPIHGLASICGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLDSPVVVLGAAGQEGAAPALAGVQWLERPTGEAELAAALERVVSRLGLGGRSAGPRGGAGAHGLVGQSAQLGEVL
Ga0099830_1032927613300009088Vadose Zone SoilVNVLVLDETLELSAPVRGLASLYGWEPHFVGSLHELEMAIRAHGRPALVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRGSAGAPPPLPGVQWLERPAEEAELTAALGRVVSRLGLGGRGLGAGGGAPAQVTSATSMALFSSAAGGPTVTRRVSASTETT*
Ga0099827_1021443633300009090Vadose Zone SoilVNVLVLDETLQLSGPVRELASLHGWQPHFVGSLHEVELAVQAHGRPALVVVNLQPPLTGWELGQRLRGLGLESPVVVLGAAGQEGAAPALAGVQWLERP
Ga0105245_1270011013300009098Miscanthus RhizosphereLERNSFEECKTVNVLVLDETMELAVPIRGLAGISGWEPHFVGSLHELEVAVAAQGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGSGGSESGAPALAGVQWLERPSGEGELAAALERVVSRLGLGGRSGGPSRNPAGHGLVGQSPQ
Ga0105242_1276522913300009176Miscanthus RhizosphereMELSAPIHGLASICGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGAAGHEGAAPALAGVQWLERPSGEAELTAALERVVSRLG
Ga0105059_102208713300009795Groundwater SandVNVLVLDETLELSAPVRELANLHGWQPHFVGSLHEVELAVQAHGRPALLVVNLQPPLTGWELGQRLRGLGLESPVVVLGPAGSAEAPPPLPGVQWLEGPAEEAELTAALGRVVSRLGLGGRRLGAGGG
Ga0105071_107323823300009808Groundwater SandVNVLVLDETLELSAPVRGLATLYGWDPHFVGSLHELELTIRAHGRPALVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRDSADSPPALPGVQWLERPAE*
Ga0126381_10326686813300010376Tropical Forest SoilVNVLVLDETLELSAPVRELASQYSWEPHFVGSLHELELAVRAQGRPGLVVVNLRPPLTAWEMGQWLRGLGLDSPVVVLGAGGGSEATPLGLAGVQWVERPE
Ga0134121_1056264923300010401Terrestrial SoilVNVLVLDETLELSAPVRGLATLYGWDPHFVGSLHELELAVRAHGRPGLVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRDSTDAPPPLPGVQWLERPAEEAELTAALSRVVSRLGLGGRRIGS
Ga0134123_1021406213300010403Terrestrial SoilVNVLVLDETLELSAPVRGLATLYGWDPHFVGSLHELELAVRAHGRPGLVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRDSTDAPPPLPGVQWLERPAEEAELTAALSRVVSRLGLGGRRIGSGGDAAAHGLVGQS
Ga0137454_103134213300011406SoilVNVLVLDETLELSAPVRGLASLYGWEPHFVGSLHELEMAIRAHGRPALVIVNLQAPLTAWELGQRLRGLESDSPVVVLGPRGTADAPPPLPGVQWLERPAEEAELMAALGRVVSRLGLGSLGAGAGGGPAAHGLIGQS
Ga0137446_107505713300011419SoilVNVLVLDETLELSAPVRGLASLYGWEPHFVGSLHELELAIRAHGRPALVVVNLQAPLTAWELGQRLRGLESDSPVVVLGPRGSADAPPPLPGVQWLERP
Ga0137445_106938213300012035SoilVNVLVLDETLELSAPVRGLASLYGWEPHFVGSLHELEMAIRAHGRPALVIVNLQAPLTAWELGQRLRGLESDSPVVVLGPRGSADAPPPLPGVQWLERPTEEAELTAALGRVVSRLGLGGGRLGAG
Ga0137322_106489813300012146SoilVNVLVLDETLELSAPVRGLASLYGWEPHFVGSLHELELAIRAHGRPALVIVNLQAPLTAWELGQRLRSLESDSPVVVLGPRDSTDAPPSLPGVQWLERPAEEAELTAALGRVVSRLGLGGRPLGAGSGVAAHGLIGQSPQLAEVLAKIE
Ga0137342_112393523300012171SoilVNVLVLDETLELSAPVRGLASLYGWEPHFVGSLHELEMAIRAHGRPALVIVNLQAPLTAWELGQRLRGLESDSPVVVLGPRGSADAPPPLPGVQWMERPAEEAELTAALGRGVSRLGLGGRRLGAGHGVGAHGLI
Ga0137387_1078238013300012349Vadose Zone SoilVNVLILDETLELSAPVRGLATLYGWEPHFVGSLHELEMAIRAHGRPALVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRDSADAPPPLPGVQWMERPAEEAELTAALGRVVSRLGLGVRRLGSSGGAAAHGLIGQSPQLAEVL
Ga0137397_1006016233300012685Vadose Zone SoilMELSAPIHGLASICGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGAAGQEGAAPALAGVQWLERPAGEAELAAALER
Ga0157303_1003974223300012896SoilLERNSFEECKTVNVLVLDETMELAVPIRGLAGISGWEPHFVGSLHELEVAVAAQGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGSGGSESGAPALAGVQWLERPSGE
Ga0137394_1035738613300012922Vadose Zone SoilVNVLVLDETLELSAPVRGLATLYGWDPHFVGSLHELELAVRAHGRPGLVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRDSTDASPPLPGVQWLERPAEEAELTAALARVVSRLGLGG
Ga0137359_1141862423300012923Vadose Zone SoilVNVLVLDETLELSAPVRGLATLYGWDPHFVGSLHELELAVRAHGRPGLVIVNLQAPLTAWELGQRLRGLESDSPIVVLRPSGSTDVPPTLPGVQWLERPTEERDGDLGRDP
Ga0137416_1086411223300012927Vadose Zone SoilMELSAPIHGLASICGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLDSPVVVLGAAGQEGAAPALAGVQWLERPTGEAELAAALERVVSR
Ga0137404_1033745133300012929Vadose Zone SoilVNVLILDESLELAGVVGRLAPVRGWQPHFIGSLLELELGVRAYGRPALVIVNLQAPLTAWELGQRLRSLEGDSPVVVLRPAGSADALPPLPGVQWLERPAEEAELTEALGRVVSRLGLAGRPLGGGLATHGLIGQSPQLGEVLAKI
Ga0164307_1014403923300012987SoilLERNSFEECKTVNVLVLDETMELAVPIRGLAGISGWEPHFVGSLHELEVAVAAQGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGSGGSESGAPALAGVQWLERPSGEGELAAALERVVSRLGLGGRSGGTSRNP
Ga0075354_100359813300014308Natural And Restored WetlandsVNVLVLDETLELSAPVRGLASLYGWEPHFVGSLHELEMAIRAHGRPALVIVNLQAPMTAWELGQRLRSLEGDSPVVVLGPRESADAPPPLPGVQWLERPAEEAELTAALGRVVSRL
Ga0163163_1020178413300014325Switchgrass RhizosphereLERNSFEECKTVNVLVLDETMELAVPIRGLAGISGWEPHFVGSLHELEVAVAAQGRPALTVVNLQPPLTAWELGQRRGGLGLESRVVVLGSGGSESGAPALAGVQWLERPSGEGELA
Ga0120098_102591213300015170FossillVNVLVLDETLELSAPVRGLASLYGWEPHFVGSLHELELAIRAHGCPALVIVNLQAPLTAWELGQRLRSLEGDSPVVVLGPRGVADAPPPLPGVQWLERPAEEAELAAALGRVVSRLGLGGRPL
Ga0137403_1044977513300015264Vadose Zone SoilVNVLILDESLELAGVVGRLAPVRGWQPHFIGSLLELELGVRAYGRPALVIVNLQAPLTAWELGQRLRSLEGDSPVVVLRPAGSADALPPLPGVQWLERPAEEAELTEALGRVV
Ga0132258_1032518543300015371Arabidopsis RhizosphereLERNSFEECKTVNVLVLDETMELAVPIRGLAGISGWEPHFVGSLHELEVAVAAQGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGSGGSESGAPALAGVQWLERPSGEGELAAALERVVSRLGLGG
Ga0132257_10385917213300015373Arabidopsis RhizosphereVIPDSERNSFEECKTVNVLVLDETMELAAQVRGLASTCGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGSGGSESGAPALAGVQWLERPSGEGELAAALERVVSRLGLGGRSSSGSRAAGH
Ga0187786_1027785623300017944Tropical PeatlandVNVLVLDETLELTAPVRGLASLSGWEPHFVGSLHELELAVQAHGRPALTVVNLVPPLTGWEVGQRLRGLGLESPVVVLGGAGSEGPAVPGVQWVERPVGEAELAA
Ga0187777_1018408713300017974Tropical PeatlandVNVLVLDETLELSAPVRELASLYELQPHFVGSLHELEVAVAAQGRPGLVVVNLQAPLTAWELGQRLRGLGLESPVVVVGEAEAGRGAGELPAGVQWVARPGQEGELTAALERVL
Ga0187767_1029402413300017999Tropical PeatlandVNVLVLDETLELSAPVRELASLYELEPHFVGSLHELEVAVAAQGRPGLVVVNLQAPLTAWELGQRLRGLGLESPVVVVGEAEAGRGAGELPAGVQWVARPGQE
Ga0184621_1005387933300018054Groundwater SedimentVNLLVLDESHELAVLLGRRAPVRGWEPHFIGSLHELEMAVQSHGRPAAVVVNLRAPLTAWELGQRLRGLRLDSPVVVLGPAGSADAAPALQGVQWVDRPAEESELTAALERVLSRLGLGS
Ga0184616_1041839713300018055Groundwater SedimentVNVLVLDETLELSAPVRGLASLYGWEPHFVGSLHELEMAIRAHGRPALVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRGTADAPPPLPGVQWLERPTEEAELTAALGRVVSRLGLGGGRLGAGSGVAAHGL
Ga0184623_1021424723300018056Groundwater SedimentVNVLVLDETLELSAPVRGLATLYGWEPHFVGSLHELEMAIRAHGRPALVVVNLQAPLTAWELGQRLRGLESDSPVVVLGPRGTADAPPPLPGVQWLERPAEEAELTAA
Ga0184637_1017307313300018063Groundwater SedimentVNVLVLDETLELSAPVRGLATLYGWEPHFVGSLHELEMAIRAHGRPALVIVNLQAPLTAWELGQRLRGLESDSPVVVLGPRGTADAPPPLPGVQWLERPAEEAELTAALGRVVSRLGLGGRRLGAGSGVA
Ga0184627_1017053823300018079Groundwater SedimentVNVLVLDETLELSAPVRGLATLYGWEPHFVGSLHELEMAIRAHGRPALVIVNLQAPLTAWELGQRLRGLESDSPVVVLGPRGTADAPPPLPGVQWLERPVEEAELTAA
Ga0184629_1037270513300018084Groundwater SedimentVNVLVLDETLELSAPVRGLASLYGWEPHFVGSLHELEMAIRAHGRPALVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRGTADAPPPLPGVQWLERPAEEAELTAALGRVVSRLGLAGGRLGAGS
Ga0190265_1029446613300018422SoilVNVLILDETLELAAPVRGLASLHGWEPHFIGSLQELDLAVRAHGRPALVLVNLEAPLTAWELGQRLRGLEGDSPVVVLRPAGEREQPPALPGVQWVERPREEAELIAALERVVSRLGL
Ga0190272_1012328113300018429SoilVNVLVLDETLELSAPVRGLASLYGWEPHFVGSLNELEMAIRAHGRPALVIVNLQAPLTAWELGQRLRGLESDSPVVVLGPGGTADAPPPVRGVQWMERPAEEAELAAELGRVV
Ga0190272_1296096513300018429SoilVNVLILDETLELSAPVRGLATLYGWEPHFVGSLHELEMAVRAHGRPGLVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRDSADAPPPLPGVQWLERPAEEAELTAALGRVVSRLGLGGRR
Ga0137408_144861313300019789Vadose Zone SoilVNVLILDETLELSAPVRGLATLYGWEPHFVGSLHELEMAIRAHGRPALVIVNLQAPLTAWELGQRLHGLEGDSPVVVLGPRDSADAPPPLPGVQWLERPAEEAELTAALGGWLVAWGLVVGGRDRAAGPRPTG
Ga0193723_104777923300019879SoilVNVLILDETLELSAPVRGLATLYGWDPYFVGSLHELELAVRAHGRPGLVIVNLHAPLTAWELGQRLRGLEGDSPVVVLGPRDSTDAPPPLPGVQWLERPAEEAELTAALGRVVSRLGLGGRRIGSGGDAAAHGLIGQSPQLGEVLAKI
Ga0193723_107561213300019879SoilVNVLVLDETLELSAPVRGLATLYGWEPHFVGSLHELEMAIRAHGRPALVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRGSAGAPPPLPGVQWLERPAEE
Ga0193725_110068913300019883SoilVNVLILDETLELSAPVRGLATLYGWDPYFVGSLHELELAVRAHGRPGLVIVNLHAPLTAWELGQRLRGLEGDSPVVVLGPRDSTDAPPPLPGVQWLERPAEEAELTAALGRVVSRLGLGGRRIGSGGDAAAHGLIGQSPQLG
Ga0193725_112375913300019883SoilVNVLVLDETLELSAPVRGLATLYGWEPHFVGSLHEMEMTIRAHGRPALVIVNLQAPLTAWEVGQRLRGLEGDSPVVVLGPRGSAEAPPPLPGVQWLERPAE
Ga0193735_108297713300020006SoilVNVLVLDETLELSAPVRGLATLYGWEPHFVGSLHELEMTIRAHGRPALVIVNLQAPLTAWEVGQRLRGLEGDSPVVVLGPRGSAEAPPPLPGVQWLERPAEEAELTAALGRVVNRLGLGGRRLGAGSGAGAHGLIGQSPQLAE
Ga0210407_1016795433300020579SoilVNVLVLDETMELSAPVRELSSNGGWEPHFVGSLHELELAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGAAGQEGAAPALAGVQWLERPSGEAELTAA
Ga0210381_1021109923300021078Groundwater SedimentVNVLVLDETLELSAPVRGLATLYGWEPHFVGSLHELEMTIRAHGRPALVIVNLQAPLTAWEVGQRLRGLEGDSPVVVLGPRGSAEAPPPLPGVQWLERPAEEAELTAALGRVVSRLGLGGRR
Ga0210404_1001284353300021088SoilMVVGRIAPVRGWEPHFVGSLHELELAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGAAGEEGAAPALAGVQWLERPSGEAELTAALERVVSRLGLGGRSSAGSRAAGH
Ga0193719_1002192443300021344SoilVNVLVLDETLELSAPVRGLATLYGWEPHFVGSLHELEMTIRAHGRPALVIVNLQAPLTAWEVGQRLRGLEGDSPVVVLGPRGSAEAPPPLPGVQWLERPAEEAELTAALGRVVSRLGLG
Ga0193719_1032806623300021344SoilVNVLILDETLELSAPVRGLATLYGWDPYFVGSLHELELAVRAHGRPGLVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRDSTDAPPPLPGVQWLERPAEEAELTAALGRVVSRLGL
Ga0210384_1001644513300021432SoilVNVLVLDETLELSAPVRELASLYGLEPHFVGSLHELELAVGAQGRPGLVVVNLQAPLTAWELGQRLRGLGLESPVVVVGGGGPERGAAELPGVQWVERPAGAGELTAALERVV
Ga0224452_107904113300022534Groundwater SedimentVNVLVLDETLELSAPVRGLATLYGWEPHFVGSLHELEMTIRAHGRPALVIVNLQAPLTAWEVGQRLRGLEGDSPVVVLGPRGSAEAPPPLPGVQWLERPAEEAELTAALGRVVSRLGLGGRRL
Ga0247673_106399813300024224SoilVNVLVLDETMELAAPVRGLAGICGWEPQFVGSLHELEQAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGAAGSEGAAPALAGVQWLERPSGEAELTAALERVVSRLGLGGRRAARSSAGGGHGLVGQSAQLGEVLG
Ga0209108_1017306723300025165SoilVNVLVLDETLELAAPVRGLASLYGWEPHFIGSLQELDLAVRAHGRPALVLVNLQAPLTAWELGQRLRGLEGDSPVVVLRAAGERESPPALAGVQWLERPREESELIAALERALSRLGLGSRG
Ga0210139_105337213300025558Natural And Restored WetlandsVNVLILDETLELSAPVRGFATLYGWEPHFVGSLHELEMAIRAHGRPALVIVNLQAPLTAWELAQRLRSLEGDSPVVVLGPRDTADAPPSLPGVQWVERPAEEAELTAALGRVVSRLG
Ga0207646_1014662613300025922Corn, Switchgrass And Miscanthus RhizosphereVNVLVLDETLELSALIGRLAPLRGWQPHFVGSLHEVELAVQAHGRPALLVVNLQPPLTGWELGQRLRGLGLESPVVVLGARGPEGEAAALPGVQWLERPVGEAELGAALEQVVSRLGLGARGAS
Ga0207675_10001852213300026118Switchgrass RhizosphereVNVLVLDETMELAVPIRGLAGISGWEPHFVGSLHELEVAVAAQGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGSGGSESGAPALAGVQWLERPSGEGELAAALERVVSR
Ga0209438_1000779103300026285Grasslands SoilVNVLVLDETLELSAPVRGLATLYGWDPHFVGSLHELELAVRAHGRPGLVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRDSTDAPPPLPGVQWLERPAEEAELTAALARVVSRLGLGGRRIGSGGDATAHGLVGQSAQLAEVLAKI
Ga0257166_103216913300026358SoilVNVLVLDETLELSAPVRGLASLYGWEPHFVGSLHELEMAIRAHGRPALVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRGSAGAPPPLPGVQWLERPAEEAELTAALGRVASRLGLRERPLGAGSGVTAHGLIG
Ga0257177_100523833300026480SoilVNVLVLDETLELSAPVRGLASLYGWEPHFVGSLHELEMAIRAHGRPALVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRGSADAPPPLPGVQWLERPAEEAELTAALGR
Ga0257159_100146013300026494SoilVNVLVLDETMELSAPIHGLASICGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGAAGQEGAAPALAGVQWLERPTGEAELAAALERVVSRLGL
Ga0257168_107295913300026514SoilVNVLVLDETMELSAPIHGLASICGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGAAGQEGAAPALAGVQWLERPAGEAELAAALERVVSRLGLGGRGS
Ga0257158_111456413300026515SoilVNVLVLDETMELSAPVHGLASICGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGAGGAEGAAPALAGVQWLERPAG
Ga0209648_1015522333300026551Grasslands SoilVNVLVLDETMELSAPIHGLASICGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGAAGQEGAAPALAGVQWLERPAGEAELAAALERVVSRLGLGGRGSSAP
Ga0209886_107727313300027273Groundwater SandVNVLVLDETLELSAPVRGLATLYGWDPHFVGSLHELELTIRAHGRPALVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRDSADSPPALPGVQWLERPAEEAELTAALGR
Ga0209073_1005856823300027765Agricultural SoilVNVLVLDETMELAVPIRGLAGISGWEPHFVGSLHELEVAVAAQGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGSGGSESGAPALAGVQWLERPSGEGELAAALERVVSRLGLGGRSGGPSRNPAGHGLVG
Ga0209701_1069621513300027862Vadose Zone SoilMNVLILDDQLGLSVPVRRLASLRGWQTHFVGSLHELELAVHAHGRTALVLVNLQPPLTAWELGQRLRGLALDGPVVVLSEAGCEDGLGELPGVVWLERPSDEAEVEPRLERVL
Ga0209889_106843323300027952Groundwater SandVNVLVLDETLELSAPVRELANLHGWQPHFVGSLHEVELAVQAHGRPALLVVNLQPPLTGWELGQRLRGLGLESPVVVLGPAGSEGAAAPGLPGVQWLERAGGEAE
(restricted) Ga0233418_1033472713300027995SedimentVNVLVLDETLDLSAPIRGLASLYGWEPHFIGSLQELDLAVRAHGRPGLVLVNLQPPLTAWELGQRLRGLEDGSPVVVVGPRGSVAVPPLLPGVHWVERPAEEADLVVALE
Ga0257175_108431413300028673SoilVNVLVLDETMELSAPIHGLASICGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGAAGQEGAAPALAGVQWLERPTGEAELAAALERVVSRLGLGGRSAGPRGGAG
Ga0307320_1046519713300028771SoilVNVLVLDETLELSAPVRGLATLYGWEPHFVGSLHELEMTIRAHGRPALVIVNLQAPLTAWEVGQRLRGLEGDSPVVVLGPRGSAEAPPPLPGVQWLERPAEEAELTAALGRVVSRLGLGG
Ga0307504_1011592323300028792SoilVNVLVLDETMELSAPIHGLASIRGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVLGEAGHEGAAPALAGVQWLERPAGEAELAAALERVVSRLGRGGRGSSAPRGGA
Ga0307305_1009175913300028807SoilVNVLVLDETLELSAPVRGLATLYGWEPHFVGSLHELEMTIRAHGRPALVIVNLQAPLTAWEVGQRLRGLEGDSPVVVLGPRGSAEAPPPLPGVQWLERPAEEAELTAALGRVVSRLGLGGRRLGAGSGAGAHGLIGQSPQLAEVLAKIE
Ga0302046_1020455923300030620SoilVNVLVLDETLELSAPVRGLATLYGWEPRFIGSLHELELASRAYGRPALVIVNLQPPLTAWELGQRLRGLGGDSPVVVLGPRESAEAAPPVPGVQWLERPGEEAELTAALGRVVSRLGLGGRVGRRRTG
(restricted) Ga0255311_100195413300031150Sandy SoilVNVLVLDETLELSAPVRGLATLYGWEPHFVGSLHELEMAIRAHGRPALVIVNLQAPLTAWELGQRLRSVGSDSPVVVLRPAGSTDVPPALPGVQWLERP
Ga0307501_1014642713300031152SoilVNVLVLDETMELSAPVHGLASICGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLESPVVVVGAGGQEGAAPALAGVQWLERPAGEAELAAALERVVSRLGLGGRGASGPR
(restricted) Ga0255312_115105123300031248Sandy SoilVNVLVLDETLELAAPVRGLASLYGWEPHFIGSLQELDLAVRAHGRPALVLVNLQAPLTAWELGQRLRGLEGDSPVVVLRPAGERESPPALAGVQWLERPREES
Ga0307469_1080291613300031720Hardwood Forest SoilVNVLVLDETLELSAPVRELASLYGLEPHFVGSLHELELAVGAQGRPGLVVVNLQAPLTAWELGQRLRGLGLESPVVVVGGGGPERGAAELPGVQWVERPAGDGELTAALERVLSRLGLGSRGASRGRGGHGLVGESGELAEVLAKIEK
Ga0307469_1132464513300031720Hardwood Forest SoilVNVLILDETLELSAPVRGLATLYGWDPYFVGSLHELELAVRAHGRPGLVIVNLQAPLTAWELGQRLRGLEGDSPVVVLGPRDSTDAPPPLPGVQWLERPAEEAELTAALGRVVSRLGLGGRRIGSGGDAAAHGLIGQSPQLGEVL
Ga0307472_10094296123300032205Hardwood Forest SoilVNVLVLDETLELSAPVRELANLHGWQPHFVGSLHEVELAVQAHGRPALLVVNLRPPLTGWELGQRLRGLGLESPVVVLGARGPEGEAAALPGVQWRERPG
Ga0335069_1023363413300032893SoilVNVLVLDETLELSAPVRGLASLSGWQPHFVGSLHELELAVQAHGRPALTVVNLQPPLTAWELGQRLRGLGLDSPVVVLGAAGSETAAPSLPGVQWLERPEGEAELTATLERTVSRLGLGARPAIRSAGAHGLVGRSEALAEVLAKIEKVAP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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