Metagenome Family F105617

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F105617
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	75 residues
Representative Sequence	MPVRLRRSLGPTLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIVQPHPIALMDR
Number of Associated Samples	72
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	35.00 %
% of genes near scaffold ends (potentially truncated)	19.00 %
% of genes from short scaffolds (< 2000 bps)	91.00 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (29.000 % of family members)
Environment Ontology (ENVO)	Unclassified (37.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.53% β-sheet: 0.00% Coil/Unstructured: 53.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF04545	Sigma70_r4	4.00
PF01627	Hpt	4.00
PF05443	ROS_MUCR	3.00
PF13432	TPR_16	2.00
PF14023	DUF4239	2.00
PF00072	Response_reg	1.00
PF07883	Cupin_2	1.00
PF07969	Amidohydro_3	1.00
PF01098	FTSW_RODA_SPOVE	1.00
PF04519	Bactofilin	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG4957	Predicted transcriptional regulator	Transcription [K]	3.00
COG0772	Peptodoglycan polymerase FtsW/RodA/SpoVE	Cell cycle control, cell division, chromosome partitioning [D]	1.00
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
All Organisms	root	All Organisms	30.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
cellular organisms	root	All Organisms → cellular organisms	30.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	16.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.00 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005167\|Ga0066672_10629570	Not Available	694	Open in IMG/M
3300005171\|Ga0066677_10836327	Not Available	508	Open in IMG/M
3300005175\|Ga0066673_10077410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1742	Open in IMG/M
3300005175\|Ga0066673_10151860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1290	Open in IMG/M
3300005175\|Ga0066673_10296954	Not Available	941	Open in IMG/M
3300005177\|Ga0066690_10062963	Not Available	2299	Open in IMG/M
3300005177\|Ga0066690_10615618	Not Available	725	Open in IMG/M
3300005177\|Ga0066690_11069941	Not Available	503	Open in IMG/M
3300005179\|Ga0066684_10449020	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300005184\|Ga0066671_10745349	Not Available	630	Open in IMG/M
3300005187\|Ga0066675_10280616	Not Available	1200	Open in IMG/M
3300005332\|Ga0066388_104744974	Not Available	692	Open in IMG/M
3300005332\|Ga0066388_108158783	Not Available	523	Open in IMG/M
3300005434\|Ga0070709_10140287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1660	Open in IMG/M
3300005435\|Ga0070714_100080459	Not Available	2835	Open in IMG/M
3300005435\|Ga0070714_100778066	Not Available	926	Open in IMG/M
3300005435\|Ga0070714_100969568	Not Available	827	Open in IMG/M
3300005451\|Ga0066681_10350115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	907	Open in IMG/M
3300005559\|Ga0066700_10588857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	776	Open in IMG/M
3300005560\|Ga0066670_10521155	Not Available	729	Open in IMG/M
3300005566\|Ga0066693_10219288	Not Available	746	Open in IMG/M
3300005569\|Ga0066705_10111290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1641	Open in IMG/M
3300005569\|Ga0066705_10478576	Not Available	780	Open in IMG/M
3300005569\|Ga0066705_10709128	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300005575\|Ga0066702_10192280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1232	Open in IMG/M
3300005575\|Ga0066702_10445596	Not Available	793	Open in IMG/M
3300005576\|Ga0066708_10379371	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300005614\|Ga0068856_102690017	Not Available	503	Open in IMG/M
3300005764\|Ga0066903_100383861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2298	Open in IMG/M
3300006028\|Ga0070717_10054001	All Organisms → cellular organisms → Bacteria	3312	Open in IMG/M
3300006028\|Ga0070717_10688440	Not Available	929	Open in IMG/M
3300006031\|Ga0066651_10329166	Not Available	820	Open in IMG/M
3300006032\|Ga0066696_10524637	Not Available	776	Open in IMG/M
3300006046\|Ga0066652_101120170	Not Available	746	Open in IMG/M
3300006175\|Ga0070712_101287323	Not Available	637	Open in IMG/M
3300006791\|Ga0066653_10317778	Not Available	785	Open in IMG/M
3300006794\|Ga0066658_10130719	Not Available	1241	Open in IMG/M
3300006796\|Ga0066665_11608962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300006797\|Ga0066659_11268694	Not Available	615	Open in IMG/M
3300006797\|Ga0066659_11850638	Not Available	512	Open in IMG/M
3300006800\|Ga0066660_10723556	Not Available	815	Open in IMG/M
3300006800\|Ga0066660_11712053	Not Available	502	Open in IMG/M
3300006804\|Ga0079221_11560043	Not Available	533	Open in IMG/M
3300006806\|Ga0079220_10700099	Not Available	744	Open in IMG/M
3300006854\|Ga0075425_100164331	All Organisms → cellular organisms → Bacteria	2548	Open in IMG/M
3300006854\|Ga0075425_101409829	Not Available	788	Open in IMG/M
3300006903\|Ga0075426_10798202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	710	Open in IMG/M
3300006914\|Ga0075436_100529725	Not Available	864	Open in IMG/M
3300006954\|Ga0079219_11093653	Not Available	675	Open in IMG/M
3300007788\|Ga0099795_10337157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300009137\|Ga0066709_102508684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300009174\|Ga0105241_10685397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	934	Open in IMG/M
3300010046\|Ga0126384_12301922	Not Available	520	Open in IMG/M
3300010159\|Ga0099796_10348651	Not Available	638	Open in IMG/M
3300010159\|Ga0099796_10545280	Not Available	521	Open in IMG/M
3300010320\|Ga0134109_10455373	Not Available	521	Open in IMG/M
3300010325\|Ga0134064_10446206	Not Available	526	Open in IMG/M
3300010358\|Ga0126370_10314472	Not Available	1249	Open in IMG/M
3300010358\|Ga0126370_11036155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	752	Open in IMG/M
3300010366\|Ga0126379_10218371	Not Available	1849	Open in IMG/M
3300010371\|Ga0134125_11664329	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300010373\|Ga0134128_12152742	Not Available	614	Open in IMG/M
3300010373\|Ga0134128_13016789	Not Available	518	Open in IMG/M
3300010376\|Ga0126381_100083780	All Organisms → cellular organisms → Bacteria → Proteobacteria	4021	Open in IMG/M
3300012198\|Ga0137364_10165862	Not Available	1605	Open in IMG/M
3300012198\|Ga0137364_10854169	Not Available	688	Open in IMG/M
3300012198\|Ga0137364_10925558	Not Available	660	Open in IMG/M
3300012198\|Ga0137364_11196902	Not Available	569	Open in IMG/M
3300012199\|Ga0137383_10608716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	799	Open in IMG/M
3300012200\|Ga0137382_11351715	Not Available	501	Open in IMG/M
3300012202\|Ga0137363_10369098	Not Available	1191	Open in IMG/M
3300012208\|Ga0137376_10006150	All Organisms → cellular organisms → Bacteria	8033	Open in IMG/M
3300012208\|Ga0137376_10178644	All Organisms → cellular organisms → Bacteria	1832	Open in IMG/M
3300012208\|Ga0137376_11119511	Not Available	673	Open in IMG/M
3300012211\|Ga0137377_10797687	Not Available	877	Open in IMG/M
3300012211\|Ga0137377_11875769	Not Available	517	Open in IMG/M
3300012285\|Ga0137370_10087552	Not Available	1737	Open in IMG/M
3300012357\|Ga0137384_11115996	Not Available	631	Open in IMG/M
3300012683\|Ga0137398_10274232	Not Available	1129	Open in IMG/M
3300012923\|Ga0137359_11789695	Not Available	501	Open in IMG/M
3300012924\|Ga0137413_10168322	Not Available	1448	Open in IMG/M
3300012951\|Ga0164300_11139034	Not Available	513	Open in IMG/M
3300014166\|Ga0134079_10111475	Not Available	1058	Open in IMG/M
3300018433\|Ga0066667_11528301	Not Available	591	Open in IMG/M
3300018468\|Ga0066662_10278918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1388	Open in IMG/M
3300018468\|Ga0066662_11334399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	738	Open in IMG/M
3300018482\|Ga0066669_10910007	Not Available	788	Open in IMG/M
3300021560\|Ga0126371_10065872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3508	Open in IMG/M
3300021560\|Ga0126371_10297221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1741	Open in IMG/M
3300025906\|Ga0207699_10079973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2024	Open in IMG/M
3300025906\|Ga0207699_11157243	Not Available	573	Open in IMG/M
3300025928\|Ga0207700_10806748	Not Available	839	Open in IMG/M
3300025929\|Ga0207664_10970013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	762	Open in IMG/M
3300025929\|Ga0207664_11454834	Not Available	606	Open in IMG/M
3300026530\|Ga0209807_1322970	Not Available	524	Open in IMG/M
3300026550\|Ga0209474_10320677	Not Available	894	Open in IMG/M
3300026557\|Ga0179587_10923586	Not Available	575	Open in IMG/M
3300027903\|Ga0209488_10652800	Not Available	758	Open in IMG/M
3300031716\|Ga0310813_10908890	Not Available	798	Open in IMG/M
3300031716\|Ga0310813_11635767	Not Available	602	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.00%
Host-Associated	Host-Associated	6.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.00%
Plants	Host-Associated → Plants	6.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.00%
Loam	Environmental → Terrestrial → Soil → Loam	19.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	29.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066672_106295701	3300005167	Soil	MFPCMPLRLHRSLSPPLNEKLVRSYAEEAARLRDLAVGVTTARLRSRLLEEADNHDRLALAAKRGIVQPHPIASMDR*
Ga0066677_108363271	3300005171	Soil	LNEKLVRSYAEQAARLRDLAVNVTTVRLRTRLLEEADNHDRLALAARRGIVQPHPIALMDR*
Ga0066673_100774104	3300005175	Soil	MPLRSPRPVNRSLHEELVRTYTEEAARLRDLAISVTTTRLRSRLLEEADNQERLAQAAKRGIIQPHFQPTGIDVLVQPRRVA*
Ga0066673_101518603	3300005175	Soil	MPLRLQKPVSRPLNENLVKAYAQEATRLRELAASVTTDRLRSRLLEEADNQDRLGLAARRGIIQPHAIPPTL*
Ga0066673_102969542	3300005175	Soil	MFPCMPVHLRRSLSPTLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIRIRRVPDAQSMG*
Ga0066690_100629632	3300005177	Soil	MPVRPQRPVGRSLHEKLVRAYADEAARLRELAAGATTARVRLRLLDEADNQERLAQAARRGIIQPQVAPPALW*
Ga0066690_106156181	3300005177	Soil	MPLRSPRPVNRSLHEKLVRTYTEEAARLRDLAISVTTTRLRSRLLEEADNQERLAQAAKRGIIQPHFQPTGVDVPVQVRRVA*
Ga0066690_110699412	3300005177	Soil	MFPCMPVRLRRSLGPTLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIAQPHPIALMDR*
Ga0066684_104490202	3300005179	Soil	MPLRSPGFVNRSLHDKLVRAYAQEATRLRDLAVSVTTARLRSRLLEEAENQERLAQAAKRGIIQPHFQPPGVDVPVQARRVA*
Ga0066671_107453492	3300005184	Soil	MFPCMLVRLHRSLSPTLNEKPVRSYAEQAARLRDLAVNVTTVRLRARLLVETENHDRLALAARRGIVQPHPIAHMDR*
Ga0066675_102806161	3300005187	Soil	MPLRLHRSLSPPLNEKLVRSYAEEAARLRDLAVNVTTVRLRSRLLEEADNHDRLALAAKRGIVQPHPIAPIDR*
Ga0066388_1047449742	3300005332	Tropical Forest Soil	MPLRARPQRPVGRSLHEKLVRAYAQEATRLRELAASATTPRVRLRLMDEADNQERLARAAKNGIVQPQPM*
Ga0066388_1081587831	3300005332	Tropical Forest Soil	MFPSMPPRAQMPVNRSLHEKLVRAYARQADRLRELAARVTIARLRYRLLEEADNQDRLAQAARRGIIRPPPQAAGSIELS*
Ga0070709_101402873	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPIRLRRSLSPALNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIVQPHPIALMDR*
Ga0070714_1000804594	3300005435	Agricultural Soil	MPVRSHSPGGRSVHEKLVRAYAQEATRLRDLAVSVTTARLKLRLLDEANNQERLAQAAKRGIVQAHPMPV*
Ga0070714_1007780662	3300005435	Agricultural Soil	MPLRLHGSLSPALNQKLVQGYAQEAARLRDLAASVTTARLRSRLLEEADNQDRLALAARRGIVQPHPVALMNS*
Ga0070714_1009695683	3300005435	Agricultural Soil	MPLRLHRPLSRPLNDKLVQAYAQEAARLRDLAVAVTTVRLRTRLLEEAENQDRLAVAARRGIVQPHPIAPMDR*
Ga0066681_103501152	3300005451	Soil	MPLRLQKPVSRPLNENLVKAYAQEATRLRELAASVTTDRLRSRLLEEADNQDRLGLAARRGVIQPHAIPPTL*
Ga0066700_105888572	3300005559	Soil	LLGMFPCMPLRLLRPVNRPLNEKLVTAYAREATRLRELAAGVTTDRLRSRLLEEADNQDRLALAARRDVVQPHPIRPTLW*
Ga0066670_105211552	3300005560	Soil	VAQLTEIEGFLRHFPCMPLRLQKPVSRPLNEKLVKAYAQEATRLRELAASVTTDRLRSRLLEEADNQDRLGLEARRGVIQPHAIPPTL*
Ga0066693_102192881	3300005566	Soil	TLNEKLVRSYAEQAARLRDLAVNVTTLRLRTRLLEEAENHDRLALAARRGIVQPHPIALMDR*
Ga0066705_101112904	3300005569	Soil	HRMPLRSPGFVNRSLHDKLVRAYAQEATRLRDLAVSVTTARLRSRLLEEAENQERLAQAAKRGIIQPHSQPTGVDVLVQARRVA*
Ga0066705_104785761	3300005569	Soil	MLLGMPLRLHRSLSPPLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIRIRRVPDAQSMG*
Ga0066705_107091282	3300005569	Soil	VAQLTEIEGFLRHFPCMPLRLQKPVSRPLNENLVKAYAQEATRLRELAASVTTDRLRSRLLEEADNQDRLGLAARRGVIQPHAIPPTL*
Ga0066702_101922802	3300005575	Soil	MPLRPQRPVGRSLHEKLVRAYADEAARLRELAAGATTARVRLRLLDEAENQERLAQAARRGIIQPQAAPPALW*
Ga0066702_104455962	3300005575	Soil	SFGACSHRMPLRSPGFVNRSLHDKLVRAYAQEATRLRDLAVSVTTARLRSRLLEEAENQERLAQAAKRGIIQPHFQPTGIDVLVQPRRVA*
Ga0066708_103793712	3300005576	Soil	MPLRSPGFVNRSLHDKLVRAYAQEATRLRDLAVSVTTARLRSRLLEEAENQERLAQAAKRGIIQPHFQPTGVDVSVQARRVA*
Ga0068856_1026900171	3300005614	Corn Rhizosphere	MFPCMPLRSQRLVSRSLHEKLVRAYAQEAGRLRDLAVSVTTARLRSRLLEEAENQERLAQAAKRGIIQPHP
Ga0066903_1003838613	3300005764	Tropical Forest Soil	MHVNRSLHEKLVRAYARQADRLRELAARVTTARLRYPLLEEADNQDRLAQAARRGIIRPQPQAAGSIPLS*
Ga0070717_100540015	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	PINRSLHEKLVLAYAQEAARLRDLAVRVTTARLKSRLLEEAENQERLAQPAKRGIIQPHSQSTGAMHR*
Ga0070717_106884402	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRLQRPVGRSLHEKLVRAYAQEAVRLRELAAGATTARVRLRLLDEAENQERLAQAAKRGIVQPQPMRV*
Ga0066651_103291662	3300006031	Soil	MRLRPQRPIGRSLHEKLVRAYAYEAARLRELAAGATTARVRLRLLDEADNQERLAQAARRGIIQPQVAPPALW*
Ga0066696_105246372	3300006032	Soil	MPVRLRRSLGPTLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIVQPHPIAHMNR*
Ga0066652_1011201702	3300006046	Soil	MFPCMPVRLRRSLGPTLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIVQPHPIALMDR*
Ga0070712_1012873231	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRPQRPVGRSLHEKLVRAYADEAARLRELAAGATTARVRLRLLDEADNQERLAQAAKRGIVQPQPMRV*
Ga0066653_103177782	3300006791	Soil	MLVCMPVRLRRSLGPTLNEKLVRSYTEEAARLRDLAVNVTTVRLRSRLLEEADNHDRLALAAKRGIVQPHPIALMDR*
Ga0066658_101307193	3300006794	Soil	MPLRSPGFVNRSLHDKLVRAYALEATRLRDLAVSVTTARLRSRLLEEAENQERLAQAAKRGIIQPHFQPTGVDVSVQARRVA*
Ga0066665_116089621	3300006796	Soil	ETSAGMFRCMPVRLHRSLSPSLNEKLVRSYAEKAARLRDLAVGVTTARLRTRLLEEAENHDRLALAARRGIVQPHPIALMDR*
Ga0066659_112686941	3300006797	Soil	MPVRLHRSLSPSLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGVVQPHPIAHMDR*
Ga0066659_118506381	3300006797	Soil	MLVRPHKTVGRSLHEELVRAYAQEATRLRDLAVSVTTARLKSRLLEEADNQERLAQAAKRGIVQPHPIAPM
Ga0066660_107235562	3300006800	Soil	MLNEKLVRSYAEEAARLRDLAVNVTTLRLRTRLLEEAESHDRLALAARRGIVQPHPIAPMDR*
Ga0066660_117120531	3300006800	Soil	MPLRPQRPVGRSLHEKLVRAYAYEAARLRELVAGATTARVRLRLLDEAENQERLAQAARRGIIQPQAAPRALW*
Ga0079221_115600431	3300006804	Agricultural Soil	MPIRLRKPLSPTLNERLVRSYAEEAARLRDLAVNVTTIRLKTRLLEEADNQHRLAQAARRGIVQPHPIAHMDR*
Ga0079220_107000992	3300006806	Agricultural Soil	MPVRLRKPLSPTLNERLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIVQPHPIALMER*
Ga0075425_1001643311	3300006854	Populus Rhizosphere	MPVRLHRSLSPSLNEKLVRSYAEEAARLRELAVGVTTARLRNRLLEEAENHDRLALAARRGIVQPHPIA
Ga0075425_1014098293	3300006854	Populus Rhizosphere	SRACRSAHKDPINRSLHEKLVLAYAQEAARLRDLAVRVTTARLKSRLLEEAENQERLAQPAKRGIIQPHSQSTGAMHR*
Ga0075426_107982021	3300006903	Populus Rhizosphere	ETSGGMFRCMPVRLHRSLSPSLNEKLVRSYAEEAARLRELAVGVTTARLRNRLLEEAENHDRLALAARRGIVQPHPIAHMDR*
Ga0075436_1005297251	3300006914	Populus Rhizosphere	MPVRLHRSLSPSLNEKLVRSYAEEAARLRELAVGVTTARLRNRLLEEAENHDRLALAARRGIVQPHPIAHMDR*
Ga0079219_110936531	3300006954	Agricultural Soil	MFPCMPLRSQRLVSRSLHEKLVRAYAQEAGRLRDLAVSVTTARLRSRLLEEAENQERLAQAAKRGIVQPHPQPTGSMHW*
Ga0099795_103371572	3300007788	Vadose Zone Soil	LHRSLSPSLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIVQPHPIALMDR*
Ga0066709_1025086842	3300009137	Grasslands Soil	VAQLTEIEGFLRHFPCMPLRLQKPVSRPLNENLVKAYAQEATRLRELAASVTTDRLRSRLLEEADNQDRLGLAARRGIIQPHAIPPTL*
Ga0105241_106853972	3300009174	Corn Rhizosphere	MPVRVRRSLSPTLNERLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIVQPHPIALMDR*
Ga0126384_123019221	3300010046	Tropical Forest Soil	MHVNRSLHEKLVRAYARQADRLRELAARVTTARLRYPLLEEADNQDRLAQAARRGIIRPQPQAAGSIQLS*
Ga0099796_103486511	3300010159	Vadose Zone Soil	MPLRPQRPVGRSLHEKLVRAYADEAARLRELAAGATTARVRLRLLDEADNQERLAQAARRGIIQPQVAPPALW*
Ga0099796_105452801	3300010159	Vadose Zone Soil	MPVRLHRSLSPSLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIVQPHPIAHMNR*
Ga0134109_104553732	3300010320	Grasslands Soil	MPVRLHRSLSPTLNEKLVRSYAEEAARRRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIVQPHPIALMDR*
Ga0134064_104462061	3300010325	Grasslands Soil	MPLRSPGFVNRSLHEKLILAYAQEASRLRDLAVSVTTARLRLRLLEEAENQERLAQAAKRGIIQPPSQPSGVDVLVRARRVA*
Ga0126370_103144722	3300010358	Tropical Forest Soil	MPLRLQRPVNHSLHEKLVQAYAQEATRLRDLAKGVTTARLRLRLLEEADNQDRLAQAAKRGIIHPHPHPVESIAFLMRAD*
Ga0126370_110361553	3300010358	Tropical Forest Soil	MQVNRSPHEKLVRAYARQADRLRELAARVTTARLRYPLLEEADNQDRLAQAARRGIIRPQPQAAGSIQLS*
Ga0126379_102183712	3300010366	Tropical Forest Soil	MPLRPQRLVSRSLHEKLVRTYAQEATRLRELAASATTARVRSRLLDEADNQERLAQAARHGIMQPQAASTLHS*
Ga0134125_116643291	3300010371	Terrestrial Soil	MFRCMPVRLRRSLSPTLNEKLVRSYAEEAARLRDLAANVTTVRLRTRLLEEAENHDRLALAARRGIVQPHPIALMDR*
Ga0134128_121527421	3300010373	Terrestrial Soil	MPVRLRRSLSPTLNEKLVRSYAEEAARLRDLAVNVTTIRLKTRLLEEAENHDRLALAARRGIVQPHPIALMDR*
Ga0134128_130167891	3300010373	Terrestrial Soil	MQLTEIETFTGMFPCMPVRLRKPLSPTLNERLVRSYAEEAARLRDLAANVTTVRLRNRLLEEAENHDRLALAARRGIVQPHPIAHMDR*
Ga0126381_1000837805	3300010376	Tropical Forest Soil	MPLRLQRPVNRSLHEKLVQAYAQEAIRLRDLAKGVTTARLRLRLLEEADNQDRLAQAAKRGIIHPHPHPVESIAFLMRAD*
Ga0137364_101658623	3300012198	Vadose Zone Soil	MPLRLHRSLSPALNEKLVRSYAEEAARLRDLAVGVTTARLRTRLLEEADNQDRLALAARRGIVQPHPIAPMHR*
Ga0137364_108541691	3300012198	Vadose Zone Soil	MPLRPQRPVGRSLHEKLVRAYAYEAARLRELAAGATTARVRLRLLDEADNQERLAQAARRGIIQPQVAPPALW*
Ga0137364_109255582	3300012198	Vadose Zone Soil	MPVRLRRSLGPTLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAESHDRLALAARR
Ga0137364_111969022	3300012198	Vadose Zone Soil	MPVRLRRSFGPTLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIVQPHPIALMDR*
Ga0137383_106087162	3300012199	Vadose Zone Soil	MLLRMPVRLRRSLTPTLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAESHDRLALAARRGIVQPHPIAPMDR*
Ga0137382_113517151	3300012200	Vadose Zone Soil	MLVCMPLRLHRSLSPALNEKLVRSYAEEAARLRDLAVGVTTARLRTRLLEEADNQDRLALAARRGIVQPHPIAPMHR*
Ga0137363_103690981	3300012202	Vadose Zone Soil	PVGRSLHEKLVRAYADEAARLRELAAGATTARVRLRLLDEAENQERLAQAARRGIIQPQAAPPALW*
Ga0137376_100061502	3300012208	Vadose Zone Soil	MPVRLRRSLGPTLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIVQPHPIALMDR*
Ga0137376_101786443	3300012208	Vadose Zone Soil	MPIRLQKPISRPLNEKLVKTYAQEATRLRELAASVTTDRLRSRLLEEANNQDRLGLAARRGVIQPHAIPPTL*
Ga0137376_111195112	3300012208	Vadose Zone Soil	MLVCMPLRLHRSLSPALNEKLVRSYAEEAARLRDLAVGVTTARLRTRLLEEADNQDRLALAARRGIVQPHPIAPMHR
Ga0137377_107976873	3300012211	Vadose Zone Soil	MPIRLQKPISRPLNEKLVKTYAQEATRLRELAASVTTDRLRSRLLEEANNQDRLGLAARRGVIQPNAIPPTL*
Ga0137377_118757692	3300012211	Vadose Zone Soil	MPVRLRRSLGPTLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAESHDRLALAARRGIVQPHPIAPMDR*
Ga0137370_100875522	3300012285	Vadose Zone Soil	MPVRLRRSLGPALNEKLVRSYAEEAARLRDLAVTVTTVRLRTRLLVEAENHDRLALAARRGIVQPHPIALMER*
Ga0137384_111159962	3300012357	Vadose Zone Soil	MPVRLRRSLGPTLNEKLVRSYAEEAARLRDLAVNVTTVRLRSRLLEEAENHDRLALAARRGIVQPHPIALMDR*
Ga0137398_102742323	3300012683	Vadose Zone Soil	MPVRLRRSLGPTLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIAQPHPIALMDR*
Ga0137359_117896952	3300012923	Vadose Zone Soil	MFPCMPLRLQRPVNRPLNEKLVMAYAQEATRLRELAAGVTTDRLRSRLLEEADNQDRLALAARRGVVQPHPIRPTLW*
Ga0137413_101683221	3300012924	Vadose Zone Soil	MPLRPQRPIGRSLHEKLVRAYADEAARLRELAAGATTARVRLRLLDEADNQERLAQAARRGIIQPQVAPPALW*
Ga0164300_111390341	3300012951	Soil	MPVRLHRSLSPALNEKLVRSYAEEAARLRDLAVGVTTARLRTRLLEEAETHDRLALAARRGIVQPHPIALMDR*
Ga0134079_101114751	3300014166	Grasslands Soil	MLLCMPVRLRRSLGPTLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLVEAENHDRLALAARRGIVQPHPIALRDR*
Ga0066667_115283011	3300018433	Grasslands Soil	MPVRLRRSLGPTLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEADNHDRLALAARRGIVQPHPIALMDR
Ga0066662_102789182	3300018468	Grasslands Soil	MPLRLQKPVSRPLNEKLVKAYAQEATRLRELAASVTTDRLRSRLLEEAHNQDRLGLAARRGVIQPHAIPPTL
Ga0066662_113343991	3300018468	Grasslands Soil	RSLSPTLNEKLVRSYAEEAARLRDLAVGVTTVGLRTRLLEEAANHDRLALAARRGIVQPHPIAPMDR
Ga0066669_109100072	3300018482	Grasslands Soil	MPVRLRRSLGPTLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIVQPHPIALMDR
Ga0126371_100658725	3300021560	Tropical Forest Soil	MPLRPQRPISRSLHEKLVRAYAQEATRLRELAASATTSRVRSRLLDEADNQDRLARAAKHGIVQPQPI
Ga0126371_102972213	3300021560	Tropical Forest Soil	MPPRAQMHVNRSLHEKLVRAYARQADRLRELAARVTTARLRYPLLEEADNQDRLAQAARRGIIRPQPQAAGSIQLS
Ga0207699_100799733	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MPIRLRRSLSPALNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIVQPHPIALMDR
Ga0207699_111572432	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MQLTEIETFTGMFRCMPVRLRRSLSPSLNEKLVRSYAEEAARLRDLAVNVTTIRLKTRLLEEADNQHRLAQAARRGIVQPHPIALMDR
Ga0207700_108067483	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRSQRLVSRSLHEKLVRAYAQEAGRLRDLAVSVTTARLRSRLLEEAENQERLAHAAKRGIVQPHPEPTGSMHW
Ga0207664_109700131	3300025929	Agricultural Soil	LHRSLSPSLNEKLVRSYAEEAARLRELAVGVTTARLRNRLLEEAENHDRLALAARRGIVQPHPIAHMDR
Ga0207664_114548341	3300025929	Agricultural Soil	MFPCMPLRSQRLVSRSLHEKLVRAYAQEAGRLRDLAVSVTTARLKSRLLEEAENQERLAQAAKRGIIQPHSQPTGAMHW
Ga0209807_13229702	3300026530	Soil	MLLGMPLRLHRSLSPPLNEKLVRSYAEEAARLRDLAVNVTTVRLRSRLLEEADNHDRLALAAKRGIVQPHPIA
Ga0209474_103206771	3300026550	Soil	MPLRPSRPLGRSLHEKLVRAYAYEAARLRELAASATTARVRLRLLDEAENQERLAQAVRRGIMQPQPVPPAL
Ga0179587_109235861	3300026557	Vadose Zone Soil	MPVRLRRSLGPTLNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIAQPHPIALMDR
Ga0209488_106528002	3300027903	Vadose Zone Soil	MPVRLRRSLGPTLNEKLVRSYAEEAPRLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIVQPHPIAHMNR
Ga0310813_109088903	3300031716	Soil	SAHKDPINRSLHEKLVLAYAQEAARLRDLAVRVTTARLKSRLLEEAENQERLAQPAKRGIIQPHSQSTGAMHR
Ga0310813_116357672	3300031716	Soil	MPIRLRRSLSPALNEKLVRSYAEEAARLRDLAVNVTTVRLRTRLLEEAENHDRLALAARRGIVQPHPIAHMDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F105617

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences